prot_H-paniculata_contig27401.7500.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27401.7500.1
Unique Nameprot_H-paniculata_contig27401.7500.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length207
Homology
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BLAST of mRNA_H-paniculata_contig27401.7500.1 vs. uniprot
Match: D7FK55_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK55_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 4.380e-14
Identity = 40/69 (57.97%), Postives = 42/69 (60.87%), Query Frame = 0 
Query:  143 MGGAYSYEDYVALATKLQAGPPERQRKVVRGVLLSIFPAWFPAFYRTLFPPSK----VRLIDCVDSFGW 207
            MGG Y+YEDYVALAT LQAG PERQR+VVRG            FYR LFPPSK    V    C   FGW
Sbjct:    1 MGGGYTYEDYVALATGLQAGAPERQREVVRGXXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGW 69
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BLAST of mRNA_H-paniculata_contig27401.7500.1 vs. uniprot
Match: A0A6H5L107_9PHAE (D27-like_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L107_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.410e-11
Identity = 38/65 (58.46%), Postives = 40/65 (61.54%), Query Frame = 0 
Query:  147 YSYEDYVALATKLQAGPPERQRKVVRGVLLSIFPAWFPAFYRTLFPPSK----VRLIDCVDSFGW 207
            Y+YEDYVALAT LQAG PERQR+VVRGV           FYR LFPPSK    V    C   FGW
Sbjct:  357 YTYEDYVALATGLQAGAPERQREVVRGVXXXXXXXXXXXFYRMLFPPSKFSAEVNAFMCPPLFGW 421
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27401.7500.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK55_ECTSI4.380e-1457.97D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5L107_9PHAE1.410e-1158.46D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27401contigH-paniculata_contig27401:243..1079 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27401.7500.1mRNA_H-paniculata_contig27401.7500.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27401 243..1079 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27401.7500.1 ID=prot_H-paniculata_contig27401.7500.1|Name=mRNA_H-paniculata_contig27401.7500.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=207bp
KPESPFAVPDNIYRDSFLDSLWINLFASRMSAAVKAESFASSSSSSSSSS
SSSSSSSSAAAAAAAPTTSQLQRDHWPAAAAAAAAAVEKRRAAAAAAATG
GEEKGSGAEVTGTLRLAGGGKATEPPELADDDESFRGQHGGGMGGAYSYE
DYVALATKLQAGPPERQRKVVRGVLLSIFPAWFPAFYRTLFPPSKVRLID
CVDSFGW
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