mRNA_H-paniculata_contig1117.750.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig1117.750.1
Unique NamemRNA_H-paniculata_contig1117.750.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: D7FQA3_ECTSI (Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA3_ECTSI)

HSP 1 Score: 419 bits (1078), Expect = 1.690e-138
Identity = 227/344 (65.99%), Postives = 271/344 (78.78%), Query Frame = 3
Query:  456 ARCERVRKSCIKNALPLGFALALIIALAWPAPGEVVSKPEVEGFRLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVISVPFFVKAVLRSSGGASIDAVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFVYLAINWPACT-LLKLKRREFKAVVLMTSQKTLPVTVTVISFLSSLGAEGLMTIPGLVAHMSQLFIDAYIAARWADDEPDQALAKSNGSK 1484
            +R +RV+K CIKN LPLGF + L+IALAWPAPG+ V+KP+V  +RLVQT+NV++IFIISGLTLKTDDIK ALSKEG  G+ YGVV+ L IT  VGF AAEIPFD  EF+YGL+VFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGV++VPF+VK V+ +   ASID V LL+K                           ++KV LSLTS+ ML+MVVWQTLSRAQD +TSV FT+ILSVIA+GIGLH VYL+IN+P C  +LKLKRREFKAVVLM+SQKTLPV+VTVI FL ++G EGLMTIP +V HMSQLF+DAYIA+RWA+D+      ++ G+K
Sbjct:    7 SRGQRVQKFCIKNVLPLGFFVVLVIALAWPAPGKAVAKPKVGDYRLVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGEDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKARVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLVYLSINYPICKYILKLKRREFKAVVLMSSQKTLPVSVTVIGFLGNVGQEGLMTIPCIVGHMSQLFMDAYIASRWANDDVAAVEDEAEGAK 350          
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: A0A6H5KQQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQQ7_9PHAE)

HSP 1 Score: 296 bits (757), Expect = 1.900e-91
Identity = 168/290 (57.93%), Postives = 199/290 (68.62%), Query Frame = 3
Query:  456 ARCERVRKSCIKNALPLGFALALIIALAWPAPGEVVSKPEVEGFRLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMN-----------------------------------AGGNDALALLLTVTTNLLGVISVPFFVKAVLRSSGGASIDAVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFV 1220
            +R +RV+K CIKN LPLGF +AL+IALAWPAPG+ V+KP+V+ +R+VQT+NV++IFIISGLTLKTDDIK ALSKEG  G+ YGVV+ L IT  VGF AAEIPFD  EF+YGL+VFCVVPTTLSSGVTLVMN                                   AGGNDALALLLTVTTNLLGV++VPF+VK V+ +   ASID V LL+K                           ++KV LSLTS+ ML+MVVWQTLSRAQD +TSV FT+ILSVIA+GIGLH V
Sbjct:    7 SRGQRVQKFCIKNVLPLGFFVALVIALAWPAPGKAVAKPKVDDYRIVQTINVIVIFIISGLTLKTDDIKEALSKEGRWGYIYGVVAILGITGAVGFVAAEIPFDVDEFSYGLSVFCVVPTTLSSGVTLVMNHHLLRSVEWFSLHGVSRCFVAFFTSCAPPFTLSPQAGGNDALALLLTVTTNLLGVVTVPFYVKGVVNAGDDASIDPVGLLVKLIISVLVPLVVGKVIREAVPGAKAWVKRFKVRLSLTSSAMLIMVVWQTLSRAQDNLTSVAFTQILSVIASGIGLHLV 296          
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: C1E9H5_MICCC (Bile Acid:Na+ symporter family n=2 Tax=Micromonas TaxID=38832 RepID=C1E9H5_MICCC)

HSP 1 Score: 261 bits (666), Expect = 1.190e-76
Identity = 151/349 (43.27%), Postives = 210/349 (60.17%), Query Frame = 3
Query:  486 IKNALPLGFALALIIALAWPAPGEVVSKPEVEGFRLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVISVPFFVKAVLRS-----SGGASID----AVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFVYLAINWPACT-LLKLKRREFKAVVLMTSQKTLPVTVTVISFLSSL--GAEGLMTIPGLVAHMSQLFIDAYIAARWADDEPDQALAKSNGSKGGVG 1496
            IKN L LGF   +++AL+WP PG  +  P+   F + QT  +V+IF ISGLTLKT DIK AL +       YG+++ LL+T  +GF   +IPF+  EF YGLA+F  VPTTL+SGVTLV +A GN  +AL+LTVTTN+LGV +VPF + AVL S     SGG   D    A KLL+K                           K+K  L LT+   L+ +VW ++S ++  +   +   I  ++ AG+ LH  +L +NW   T ++K+   E +AV+LMTSQKTLPV VT+I++L     GA+GL+ IP +V H+SQLFIDAYIA+ WA  +P +   ++   + GVG
Sbjct:   24 IKNYLVLGFVFVIVLALSWPLPGRELGSPKSGDFPIAQTCCIVVIFFISGLTLKTADIKKALGQPA--ALAYGIITILLVTPMMGFVVVQIPFEPVEFRYGLALFACVPTTLTSGVTLVTSALGNGVMALMLTVTTNVLGVFTVPFILNAVLLSAPGGDSGGTDTDMAETAAKLLLKLIISIIIPMGVGKATREFVEQAPSFTTKYKTELGLTNNSCLIAIVWMSISNSRGKLVRESALNIFVIVVAGVLLHLFFLTMNWVMTTAVMKIPEAERRAVLLMTSQKTLPVAVTIIAYLDEARWGAQGLIAIPCIVGHVSQLFIDAYIASIWAGQDPKEIDERNAAKRAGVG 370          
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: A0A7S0SJ85_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SJ85_9CHLO)

HSP 1 Score: 255 bits (652), Expect = 1.240e-74
Identity = 152/347 (43.80%), Postives = 207/347 (59.65%), Query Frame = 3
Query:  486 IKNALPLGFALALIIALAWPAPGEVVSKPEVEGFRLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVISVPFFVKAVLRSSGG----------ASIDAVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFVYLAINWPACT-LLKLKRREFKAVVLMTSQKTLPVTVTVISFLSSL--GAEGLMTIPGLVAHMSQLFIDAYIAARWADDEPDQALAKSNGSKG 1487
            ++N L LGFA  + + L+WP PG  +  P    F + QT  +V IF ISGLTLKT DIK AL++   VG  YG++  L +T  +GF   +IPF+  +F YGLA+FC VPTTL+SGVTLV +A GN ALAL+LTVTTN+LGV +VPF + AVL S+ G           +  A++LLIK                            +KV L L +   L+ +VW ++S++++ +       I  ++ AGI LH ++LA+NW   T +L+L+ +E +AV+LMTS KTLPV VTVIS+L     G  GL+ IP +V H+SQLFIDA IAARWA + P    A   G  G
Sbjct:   10 LRNFLVLGFAAVITLGLSWPLPGAELGDPMAGDFPIAQTCCIVTIFFISGLTLKTADIKNALNEH--VGLVYGIIMILGVTPMLGFLVVQIPFEPIQFRYGLALFCCVPTTLTSGVTLVTSALGNSALALMLTVTTNVLGVFTVPFILNAVLDSAPGNGXXXXXXXSVAKTAMQLLIKLVISIIIPMSIGKSVREFFAVAQKATATYKVELGLVNNSCLIAIVWMSVSKSREKLVGQTPLNIFIIVVAGITLHIIFLAVNWTMTTPVLRLREKERRAVLLMTSAKTLPVAVTVISYLDEAVWGGHGLIAIPCIVGHVSQLFIDAAIAARWAANPPPADAAAEAGGSG 354          
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: A0A836CLX8_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX8_9STRA)

HSP 1 Score: 254 bits (649), Expect = 2.260e-74
Identity = 147/317 (46.37%), Postives = 199/317 (62.78%), Query Frame = 3
Query:  504 LGFALALIIALAWPAPGEVVSKPEVEGFR-LVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVISVPFFVKAVLRS----SGGASIDAVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFVYLAINWPACTL-LKLKRREFKAVVLMTSQKTLPVTVTVISFLSSLGAEGLMTIPGLVAHMSQLFIDAYIAARW 1436
            +G A A+II L+WP  G+ V  P+   +     T  V+ IFIISGLTLKTDDI+ A+SK+G  G  YG+++ L IT  +GF    +P  + EFAYGL VFC VPTTL+SGV++V  AGGN ALALLLTV TNL  V++ PF++ A+ +S    + GA+ID V LL K                           + KV L + +  ML ++VW T+S A + + S  F +I  VIA GI +H +YL++NWP     LKL   EFKAV +M SQKTLP++VT+IS+L++LG+ G MT+P +V HMSQLFIDA + + W
Sbjct:    1 MGLATAVIIGLSWPWLGQKVGAPDAGEYGGAASTACVIGIFIISGLTLKTDDIRMAISKQGRAGTIYGIIAILGITPILGFLTIRLPLAQPEFAYGLTVFCAVPTTLASGVSMVTQAGGNGALALLLTVVTNLTAVVTTPFWLSAMFKSKSQGTNGATIDPVSLLQKLIVTVLVPLVFGKLLRDLVPGCKGFVTRQKVKLGVCNNIMLTLIVWLTISDAAEDLLSTPFADIAVVIACGIAVHVIYLSLNWPMGKFALKLPLPEFKAVTIMASQKTLPLSVTIISYLTALGSTGFMTLPCIVGHMSQLFIDAGLQSMW 317          
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: A0A1Y1IAA6_KLENI (Sodium Bile acid symporter family n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAA6_KLENI)

HSP 1 Score: 248 bits (632), Expect = 1.140e-71
Identity = 141/320 (44.06%), Postives = 199/320 (62.19%), Query Frame = 3
Query:  471 VRKSCIKNALPLGFALALIIALAWPAPGEVVSKPEVEGFRLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVISVPFFVKAVLRSSGGASIDAVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFVYLAINWPACTLLKLKRREFKAVVLMTSQKTLPVTVTVISFLS-SLGAEGLMTIPGLVAHMSQLFIDAYIA 1427
            +R+  I N LPLGF  AL  AL+WP PG  V+  ++   R++Q LN +++F+ISGLTLK++D+K AL     VG  YG+V+ LL+T CVGF   +IPF  +EF  GL +FC VPTTL  GV LV  + GN ALAL LTV+TN+LG+++VP+ +K  LR S   SIDA+ L  K                             KV LSL ST  LV++VWQTLS A+D +   +  +++ ++ A IGLH  YL  N  A  LL+L   E  AVV+M+SQK+ PV VTVI++++ ++  +GL++IPGL+  + Q+F+ + IA
Sbjct:   71 IRRFVIANFLPLGFLFALAFALSWPQPGREVASWKIGSIRVIQALNNILVFLISGLTLKSNDLKEALKNW--VGVLYGIVTILLVTPCVGFVTQQIPFRPREFTEGLTIFCAVPTTLGVGVALVAASKGNQALALFLTVSTNVLGILTVPYVLKLTLRGSSTISIDALDLFFKLTCTVLVPTLVGKFASSTSSRVRTFVQSHKVALSLFSTSNLVLIVWQTLSGARDILLKQSGGDVMLIVCAVIGLHIFYLGFNVAAVWLLRLPLVEAIAVVIMSSQKSAPVAVTVITYITPNIATQGLLSIPGLIGQLFQIFLGSAIA 388          
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: A0A836CJ89_9STRA (Cysteine proteinase cathepsin F n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ89_9STRA)

HSP 1 Score: 244 bits (624), Expect = 4.920e-71
Identity = 138/310 (44.52%), Postives = 203/310 (65.48%), Query Frame = 3
Query:  516 LALIIALAWPAPGEVVSKPEVEGFRLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVISVPFFVKAVLRSSGGASIDAVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFVYLAINW-PACTLLKLKRREFKAVVLMTSQKTLPVTVTVISFLSSLGAEGLMTIPGLVAHMSQLFIDAYIAARWAD 1442
            +AL+I LAWP PG  VS   V  +R+VQTLNV+ +F+ISGL LK+ DI+ A+S+EG +GF  G+V  L +T   GF A  +PF +KEFAYGLA+FC VPTT++ GV +   AGGN ALAL+LTV +NLLGV+  PF+++A   S    +IDA+ LL+                            + K  L L S+  L ++VWQT+SR+ + I +V+   I+++IAA + +H  YL +++  A  LL+L   E KAVV+M+S+KTLPV + VI+FL+++G+EGL++IP +V+   QLF+D++IA +W +
Sbjct:    1 MALLIGLAWPQPGTEVSSWMVADYRVVQTLNVMTVFLISGLNLKSADIRAAVSREGSLGFIVGMVLILGVTPLSGFVAVRLPFAEKEFAYGLAIFCGVPTTIAVGVAMTTAAGGNAALALMLTVFSNLLGVLITPFWLQAFF-SGQDVAIDALDLLVNLLITVLAPLLVGQAIRFLVPPVRTLVTRHKTALKLISSTSLALIVWQTVSRSAEDILAVSGGSIVAIIAASLIMHVAYLVVSFVTARYLLRLGDAELKAVVIMSSEKTLPVAIAVIAFLTNVGSEGLLSIPPIVSQQVQLFMDSFIATKWGE 309          
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: A0A5B8MCM7_9CHLO (Putative sodium/metabolite cotransporter n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MCM7_9CHLO)

HSP 1 Score: 239 bits (610), Expect = 5.170e-68
Identity = 141/322 (43.79%), Postives = 196/322 (60.87%), Query Frame = 3
Query:  489 KNALPLGFALALIIALAWPAPGEVVSKPEVE----GFRLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVISVPFFVKAVLRSSGGASIDAVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFVYLAINWPACTLLKLKRREFKAVVLMTSQKTLPVTVTVISFLSSL--GAEGLMTIPGLVAHMSQLFIDAYIAARW 1436
            KN LPLG   A  +A+ +P PG  V K  VE     ++LV +  + +IF+ SG TLKTDDI  A   +  V  GYG V+ LLIT  +GF   ++PF  K FA GL+VFC VPTTLSSGV LV   GGN ALALLLTV TNLLG+++VPF VK VL S      DA+ LLIK                           + K   S+ ++  LV++VWQTLS+AQ  +   +  ++L ++A GIG+H  +L  N+ + +LL++++ E++A++L TSQKTLP+ VTVI+FL     G  GL+ +P +V+H+ Q+ ID+ I +RW
Sbjct:   11 KNFLPLGLVTAATVAMVYPPPGREVQKHMVEVNGNDYKLVSSCLIFLIFLSSGFTLKTDDIMKA--AKNYVAVGYGFVAILLITPTLGFGIMKLPFKPKAFASGLSVFCAVPTTLSSGVALVTQGGGNAALALLLTVGTNLLGILTVPFAVKLVLDSEEDFDFDALSLLIKLAITILAPLILGKLLRHSHQALGKFAKEKKQKFSMANSLCLVLIVWQTLSKAQPEVIDQSAGDLLLLVAGGIGIHIAFLVFNFISVSLLRVEQPEYRALLLCTSQKTLPIAVTVINFLPEPYEGYHGLLVVPCVVSHLVQILIDSVIVSRW 330          
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: A0A7S0Z714_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z714_9CHLO)

HSP 1 Score: 233 bits (595), Expect = 1.200e-66
Identity = 153/349 (43.84%), Postives = 202/349 (57.88%), Query Frame = 3
Query:  429 IITMSLEQAARCERVRKSCIKNALPLGFALALIIALAWPAPGEVVSKPEVEGFRLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVISVPFFVKAVLRSSG---GASID-------AVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFVYLAINWPACTLLKLKRREFKAVVLMTSQKTLPVTVTVISFLSS--LGAEGLMTIPGLVAHMSQLFIDAYIAARWA 1439
            IITM   Q     R +K  + N L LGF LAL I L+ PA G  ++     G+ +VQT+ V+IIFIISG TLKT++I  AL + G     YG+VS L +T  +GF    IP+   +F YGLA+FC VPTTL+SGVTLV NA GN ALAL+LTV+TNLLGV +VPF+  A+ RS     G S         AV LL+K                           K K  L+LT+   L++VVW ++S++   + S +   I  VI AGI  H V+LAIN+ A   L +   E  A V+M+SQKTLPV +TVIS+L     G  GL+ IP ++ H++QLF+DA +A R A
Sbjct:   11 IITMPDTQPLAAARAKKFVVDNFLVLGFCLALTIGLSAPAAGTTIAGWSSGGWSIVQTIAVIIIFIISGATLKTEEIAQAL-QSGRGALAYGLVSILGVTPLLGFIHINIPYTPVQFRYGLALFCAVPTTLTSGVTLVRNAKGNVALALMLTVSTNLLGVFTVPFYFNAIARSGSSTLGTSASGRDMGSQAVDLLVKLLCTILVPICAGKIAREMIPVIAERAAKHKQELTLTNNSCLIIVVWMSISKSAKQLLSTDAGSIFLVIFAGIATHVVFLAINYGATGALGISGPERVASVMMSSQKTLPVAMTVISYLDEDVFGTSGLIAIPCIICHLTQLFMDAPLATRLA 358          
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Match: A0A061RZ11_9CHLO (Cysteine proteinase cathepsin f n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RZ11_9CHLO)

HSP 1 Score: 229 bits (583), Expect = 3.620e-64
Identity = 139/333 (41.74%), Postives = 194/333 (58.26%), Query Frame = 3
Query:  474 RKSCIKNALPLGFALALIIALAWPAPGEVVSKPEVEGFRLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACVGFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTVTTNLLGVISVPFFVKAVLRSSGGAS------IDAVKLLIKXXXXXXXXXXXXXXXXXXXXXXXXXXXKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILSVIAAGIGLHFVYLAINWPACTLLKLKRREFKAVVLMTSQKTLPVTVTVISFLSS-LGAEGLMTIPGLVAHMSQLFIDAYIAARWADDEP 1451
            R   IK+ LPLGF +AL + L +P PG  ++  E  G++L Q++ +V+IFI+SGLTLKT ++  A+     + + YG+++ L +T   G A  +IPF++  F  G AVFC VPTTL+SGVTLV  A GN ALAL+LTVTTN+LGV + P  +   LR SG ++       D   L++K                             K  LSLT+  +L+ +VW T+S  +D I +     I   IA GI LH V LA+N  AC LL+L   E KA  ++ SQKTLPV++TV+SFL   LG  GL+TIP ++ H+SQLF DA++ +    D P
Sbjct:   62 RAFVIKHFLPLGFCVALAVGLGFPLPGAWLAGFEFGGYKLAQSVCIVLIFIVSGLTLKTSEVTAAIKAW--LAYTYGIIAILFLTPFAGLAILQIPFEEPAFGVGFAVFCSVPTTLTSGVTLVNQAAGNGALALMLTVTTNVLGVFTTPLMLALNLRVSGMSAETGTITFDTGALIVKLVATILAPTVFGKLVRESHHSVSDWVAGHKTLLSLTNNSLLICIVWMTISSGRDVIVAQPAEMIFLAIAVGIALHAVLLALNGAACWLLRLAPPERKAAHILGSQKTLPVSITVLSFLPPRLGNIGLLTIPCIIGHLSQLFTDAFLVSTGKFDRP 392          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1117.750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQA3_ECTSI1.690e-13865.99Cysteine proteinase Cathepsin F (ISS) n=2 Tax=Ecto... [more]
A0A6H5KQQ7_9PHAE1.900e-9157.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
C1E9H5_MICCC1.190e-7643.27Bile Acid:Na+ symporter family n=2 Tax=Micromonas ... [more]
A0A7S0SJ85_9CHLO1.240e-7443.80Hypothetical protein n=1 Tax=Mantoniella antarctic... [more]
A0A836CLX8_9STRA2.260e-7446.37Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
A0A1Y1IAA6_KLENI1.140e-7144.06Sodium Bile acid symporter family n=1 Tax=Klebsorm... [more]
A0A836CJ89_9STRA4.920e-7144.52Cysteine proteinase cathepsin F n=1 Tax=Tribonema ... [more]
A0A5B8MCM7_9CHLO5.170e-6843.79Putative sodium/metabolite cotransporter n=1 Tax=C... [more]
A0A7S0Z714_9CHLO1.200e-6643.84Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
A0A061RZ11_9CHLO3.620e-6441.74Cysteine proteinase cathepsin f n=1 Tax=Tetraselmi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1117contigH-paniculata_contig1117:21399..25992 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score421.4
Seed ortholog evalue4.3e-115
Seed eggNOG ortholog2880.D7FQA3
KEGG koko:K14347
KEGG TC2.A.93.1
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.symporter activity
EggNOG OGsCOG0385@1,KOG4821@2759
Ec32 ortholog descriptionPutative sodium bile acid cotransporter
Ec32 orthologEc-01_006880.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko02000,ko04147
Exons4
Model size2118
Cds size1083
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1117.750.1prot_H-paniculata_contig1117.750.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig1117 21836..25394 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928822.3350518-UTR-H-paniculata_contig1117:21398..218351622928822.3350518-UTR-H-paniculata_contig1117:21398..21835Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1117 21399..21835 +
1691480633.8236399-UTR-H-paniculata_contig1117:21398..218351691480633.8236399-UTR-H-paniculata_contig1117:21398..21835Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1117 21399..21835 +
1622928822.4777462-UTR-H-paniculata_contig1117:25394..259921622928822.4777462-UTR-H-paniculata_contig1117:25394..25992Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1117 25395..25992 +
1691480633.8736067-UTR-H-paniculata_contig1117:25394..259921691480633.8736067-UTR-H-paniculata_contig1117:25394..25992Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig1117 25395..25992 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928822.34797-CDS-H-paniculata_contig1117:21835..222461622928822.34797-CDS-H-paniculata_contig1117:21835..22246Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1117 21836..22246 +
1691480633.8363767-CDS-H-paniculata_contig1117:21835..222461691480633.8363767-CDS-H-paniculata_contig1117:21835..22246Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1117 21836..22246 +
1622928822.36077-CDS-H-paniculata_contig1117:22911..230551622928822.36077-CDS-H-paniculata_contig1117:22911..23055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1117 22912..23055 +
1691480633.8462744-CDS-H-paniculata_contig1117:22911..230551691480633.8462744-CDS-H-paniculata_contig1117:22911..23055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1117 22912..23055 +
1622928822.4505906-CDS-H-paniculata_contig1117:23523..237501622928822.4505906-CDS-H-paniculata_contig1117:23523..23750Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1117 23524..23750 +
1691480633.85597-CDS-H-paniculata_contig1117:23523..237501691480633.85597-CDS-H-paniculata_contig1117:23523..23750Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1117 23524..23750 +
1622928822.4656622-CDS-H-paniculata_contig1117:25093..253941622928822.4656622-CDS-H-paniculata_contig1117:25093..25394Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1117 25094..25394 +
1691480633.8649955-CDS-H-paniculata_contig1117:25093..253941691480633.8649955-CDS-H-paniculata_contig1117:25093..25394Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig1117 25094..25394 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig1117.750.1

>prot_H-paniculata_contig1117.750.1 ID=prot_H-paniculata_contig1117.750.1|Name=mRNA_H-paniculata_contig1117.750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=361bp
MSLEQAARCERVRKSCIKNALPLGFALALIIALAWPAPGEVVSKPEVEGF
RLVQTLNVVIIFIISGLTLKTDDIKTALSKEGIVGFGYGVVSTLLITACV
GFAAAEIPFDKKEFAYGLAVFCVVPTTLSSGVTLVMNAGGNDALALLLTV
TTNLLGVISVPFFVKAVLRSSGGASIDAVKLLIKLVVAVLIPLVIGKLVR
EAIPGAKPWVKKWKVWLSLTSTGMLVMVVWQTLSRAQDTITSVNFTEILS
VIAAGIGLHFVYLAINWPACTLLKLKRREFKAVVLMTSQKTLPVTVTVIS
FLSSLGAEGLMTIPGLVAHMSQLFIDAYIAARWADDEPDQALAKSNGSKG
GVGMTAQATV*
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mRNA from alignment at H-paniculata_contig1117:21399..25992+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig1117.750.1 ID=mRNA_H-paniculata_contig1117.750.1|Name=mRNA_H-paniculata_contig1117.750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4594bp|location=Sequence derived from alignment at H-paniculata_contig1117:21399..25992+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAATTTCATATGGATTAAGTAAATCATAATCTCGCGACCCGTCGATCTGA CGACAGACAGTGCCCTCAAGCTGTCTTGTGGAGCGGCCTTACACTGTATA TCTTGCTCGGAGAGCTTTGGCGATTTCTATCCGCTGAAGTATTCGGTGTG AAAAGGTGATATCTCCTTGAAAGGAGGCTGAGAGGAAATAACTCCAACGG CTGACGAACTTGACCTCATGTACTGACGCTCTGTCACGTTATTGCCACGT ACTGGAGCGTCACCATCTCATGAGAGAGGAAAAGAGGCTGCTGGGCTACG AAAGACGAGGTTCCAAACGTTAAACGCGTGTGTGCGGCTTCAAATAGCGA CTGGCCTCGTGCCGTGCTTGCTGCTGGTATCTACCGCTGCGTTGTTGAAC TTCAACAGAGGGAGAAGCTATTGTGGTAATCATTACGATGTCTCTGGAGC AAGCCGCACGGTGTGAACGAGTCCGCAAGAGCTGCATCAAAAATGCCCTA CCACTGGGCTTCGCTCTGGCGCTCATAATCGCCCTTGCGTGGCCTGCACC GGGTGAAGTTGTGAGCAAGCCGGAGGTAGAAGGCTTCAGGTTGGTGCAGA CCCTCAACGTCGTTATCATCTTCATCATCTCGGGCCTCACCCTCAAAACC GACGACATCAAAACGGCCCTGAGCAAGGAGGGCATCGTAGGGTTCGGTTA CGGAGTGGTGTCGACCCTACTCATCACGGCATGCGTCGGTTTTGCCGCCG CGGAGATTCCGTTCGACAAGAAGGAGTTTGCCTACGGGCTTGCTGTGTTC TGCGTAGTGCCGACGACGTTGTCTTCCGGAGTTACGTTGGTCATGAACGT GAGTTGTGCACGCACCAAAGCGTGGCAAAAAAGAGACAAAAGGATCCTCT TGGGAGTCGCTGTTAGATCGATTTTAAATTTTGTTCGAATACGGAGTGTA CTCATCACGGCATGCGTCGGTTTTGCTGATGCGGAAATTCCATTTGTACA GGAAATGCTTGTAGTTTTCGTACGGGCTTGCTGTCTTCTGCGTAGTGCCG ACGACCTTGTCGTCCGGGATTATGTTGGTCATGAATATTAGTTGTGGATA CACCTAAGCGTGACAAGAGGAGATAACCGGATTCTATTCGGAGCCGCTGT TGGACTATAATTTTTTTTGCAATATTACGATTGGTATGCCAATTTTGTCG GTGATTTCTCCATGATAAAGGAAGAAAGGTCAAGCCGCCCTGAGGAGTAC CAGTTGTTGCATTTGTGGGGGTGGGATTTTGCCATCCTACAATAGTAAGC ACAAGAGTACAGAAATGTTGTCTCGAGTGGGCGAAATTGCCGTATGATTC GCTCCCGCTGTTTTGTACAGAGTATGCCTACCGGAGAAACAATTGGCGTC CAAACCCCACTGTAGCACATTTTCAAAGGATATCGCTGCCAACCATGGCT AAATATAAGTACTCCATCGCCCGCCGCCTTCGCCCCCCGCCATTCTTCAA CGCCGCTGAAAAGGCTGGAGGAAATGACGCTCTAGCGTTGCTGCTAACGG TGACAACGAACCTGTTGGGTGTCATAAGTGTACCGTTTTTCGTGAAGGCT GTGTTGAGGTCATCAGGGGGCGCATCAATCGACGCGGTGAAGCTGCTGAT CAAATTGGTGAGACATCATCGAGCCGAAAGAGAGAGAAATGCTGAGAGAT GAAGTGGATCAGTTGGCAGAATGTTTGACAGCACCACCGCAAGCCTTGGA GCTTTGCTACGGAGCGAAAAATATGTTACATTTTCCCTTCGCTACTCTCC TGTACCTAAGAATGCAAGTGTGTTTATCTATTTTTCGGGTTCGCCCAGGA GAATAGACTGCTGTACTCAGTGTTGACACTCGTCAGTAGCGTCTCGAGGA ATAAGCCAGCGATGCATGCATCGTCGTGATCACCACCTATTCTGCAAGCT TGAGAGTCTACACTATCCCCACGACATGTCCCGTTTTGTGGCTCACTGTA CTCACTCCCCGCATCCGCACCTCGATTCGATGGTTCTCGTCCACGCCTTA TCTACCCGCTTCGTGATGGTGGACTTTGCTTCTTGTGCGCACATTACGTT TTAATCTTGTCTCTCGGCTGGTCAGGTCGTGGCCGTACTGATCCCTTTGG TGATAGGTAAATTGGTGCGAGAGGCGATTCCGGGGGCAAAGCCGTGGGTC AAGAAATGGAAGGTGTGGCTGAGCTTAACGAGCACCGGAATGCTGGTCAT GGTGGTGTGGCAAACGCTGAGCAGGGCTCAAGACACCATCACGTCAGTGA ATTTTACGGAGATATTATCCGTCATCGCCGCCGGTATCGGGCTCCACTTT GTGTGAGTGTCGCCGACATTGGAATTTCTGCCTCATTCATGGATTCAGGA CAGCGGGAGATTCGTACCAAGGATAAAAATAGTTGGAAATCCTGTCGACG ACCCGTTAGCTTGCCGCAGGGGCCCCGTGACGCGTGATGTTGCACCAGAT TTGGTTGATATTTTTCCTTGCCCAACCGGTGTTCCTCAAAACTCCTGTTG GACTAGATTTGGTTGATATTTTATCTTGGTCAATCAATAATCTTCCAGGC TCCTGTAGGCTACGAGTACGTGAGCAGCAAGGAACAGAGCAGAAGTTTTG GTGCGAACGTGTAAATACCCGCTGTGTCCGAGCAACAAGGGCGAACATAT ACGTGTTTATATATATATACTCACTGTATTAATTTATCAAATGCGTACCA ATACTGCTTATCTGTATTTGTATCTACCCGTCAAATAATACTCTTCTTAG CCTTGAGGTAACTGTATTACGTGAAAAGCAAGCAAAACACACAAGAAAAG TTATCACCCTCAAGGGAAGCAAAATTTCAGTCCCCAAAACACTTATTTGC CTTCACGGCGAAAACGAGGCATGACTCAAAAGAGAAAATTGACCAAAAAT AAAACTGGCGTGATGGCAATAATTAACCCCGCCATAAAAATTCGCTTACG GCGAACTAGTCGGCAGACCCAAAATCGTTGTCAGAGGTTCCGCCTGCACA ACCCTATATTAATCTATTAATTCCCCGATCTGAACTCTGAGTCCCTGGTG AGCATCTGGGTGATGAAGTAGCCATCACTTTGTTTTACTCGTTCGCATCG AACGTCGTCTTCCTCTCTTGCCCTTTCCACGAATTCGCGAATCCACCCGT GTTTAGCCTGGTGCCGTTGATCCGATCAAAGACATGCTGCTAGTGGTGTT GTTCCACCAAAGTGTGTCTACCAGTCACTGTTTTACGAATAGTTCAAGCG TTTTTTTTTGTTATGCGTGGGGAATTCACTGCAACTGTTGGATTGCGTGC CGCACTTGTATCTGCAGCGCGCTTGTGTCCTGTGCGTTTCGTACGTGGCA AGGGAGAGTTGAGACATGAGGTCCAAAGCATTCCGGCATCTTCTCTCTTT TTTTGTCCTTTTTGGCTTTTGAACTTTGTCTATACTGAGTGGCCCACCGC CACCATGAACGTGACCATTTGTCCTACTCCCAGTACTAATAGAAGCCTTT GACCGTTCCGAGAATTGCACAAATACAAGTTGTCATGTACAGAAGCACGT TTGACCTGGCTTTTTCTGTCCAACTCGCCCTCCTCATGCGCCGTCTCCGT CACAATCTATGGAACTGCCGCTCTTCCAAACTCACGCACACACAGATACC TGGCCATAAACTGGCCGGCGTGCACCCTGCTCAAGCTGAAGCGGCGAGAG TTCAAAGCCGTCGTGCTCATGACCTCGCAGAAGACGTTGCCCGTTACTGT GACCGTGATATCTTTCCTTAGCAGCTTGGGCGCGGAAGGCTTGATGACGA TACCTGGCCTCGTGGCGCACATGTCGCAACTCTTTATCGACGCCTACATC GCTGCGCGCTGGGCAGACGACGAACCGGATCAGGCGCTCGCCAAGAGTAA TGGATCCAAGGGTGGGGTCGGCATGACCGCGCAAGCCACCGTGTAACGTA ACGTTGCGGCAGCGTTTTCGCGTTGAAGAGATTTTGCTGCAGGAGTACAT TCCGAAAAGTGTTTTCAGTTGTGAGATACGTGTGCCGTGAAAGTGTATCC AACGTGAATGTCGTAGTGGCCCACCGGTCAAGAGCGTTGTGCGCTCGTAC GAAGGCGTGACCAAGGAGGTGGGTACTGAAGGTGTGCAGATGTGTGTGTA TGTGTTTCCTTCTGTGTATTTCCGTCAATCCACTGTTCCTTTGTTCTGTT GTGAGAGGTTTCGTGTGACGAATGAGGATCTTCCGTCAGTACTATTTTTC AATTTGTGTTTAGGTGCTTCATGATAATGAGTTGTTGAATGCGTTCGCAC TAGGTGAGTTGCTTCTGACGTCGAGTGCTGTTGTAGTAGTGGTGACTGTG CCGCGAGGCACGTTTTAAGTGAAGGTGTAGATGGCTTTGTACTTGCGAGT CAGCCAGTCACGTATCTGACACGCCCAAACCAAGTGAGCGCGTTTCCGTG GCTTGCGTGCCGTTGTTCTGCACCATGTTCATTTCTTTTATTTTGTTTTT TTGGCGGAGGGAACGGGGGGGGGGGGAGAATTGGCGCAGCGAAT
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Coding sequence (CDS) from alignment at H-paniculata_contig1117:21399..25992+

>mRNA_H-paniculata_contig1117.750.1 ID=mRNA_H-paniculata_contig1117.750.1|Name=mRNA_H-paniculata_contig1117.750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2166bp|location=Sequence derived from alignment at H-paniculata_contig1117:21399..25992+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTCTGGAGCAAGCCGCACGGTGTGAACGAGTCCGCAAGAGCTGCAT
CAAAAATGCCCTACCACTGGGCTTCGCTCTGGCGCTCATAATCGCCCTTG
CGTGGCCTGCACCGGGTGAAGTTGTGAGCAAGCCGGAGGTAGAAGGCTTC
AGGTTGGTGCAGACCCTCAACGTCGTTATCATCTTCATCATCTCGGGCCT
CACCCTCAAAACCGACGACATCAAAACGGCCCTGAGCAAGGAGGGCATCG
TAGGGTTCGGTTACGGAGTGGTGTCGACCCTACTCATCACGGCATGCGTC
GGTTTTGCCGCCGCGGAGATTCCGTTCGACAAGAAGGAGTTTGCCTACGG
GCTTGCTGTGTTCTGCGTAGTGCCGACGACGTTGTCTTCCGGAGTTACGT
TGGTCATGAACATGTCTCTGGAGCAAGCCGCACGGTGTGAACGAGTCCGC
AAGAGCTGCATCAAAAATGCCCTACCACTGGGCTTCGCTCTGGCGCTCAT
AATCGCCCTTGCGTGGCCTGCACCGGGTGAAGTTGTGAGCAAGCCGGAGG
TAGAAGGCTTCAGGTTGGTGCAGACCCTCAACGTCGTTATCATCTTCATC
ATCTCGGGCCTCACCCTCAAAACCGACGACATCAAAACGGCCCTGAGCAA
GGAGGGCATCGTAGGGTTCGGTTACGGAGTGGTGTCGACCCTACTCATCA
CGGCATGCGTCGGTTTTGCCGCCGCGGAGATTCCGTTCGACAAGAAGGAG
TTTGCCTACGGGCTTGCTGTGTTCTGCGTAGTGCCGACGACGTTGTCTTC
CGGAGTTACGTTGGTCATGAACGCTGGAGGAAATGACGCTCTAGCGTTGC
TGCTAACGGTGACAACGAACCTGTTGGGTGTCATAAGTGTACCGTTTTTC
GTGAAGGCTGTGTTGAGGTCATCAGGGGGCGCATCAATCGACGCGGTGAA
GCTGCTGATCAAATTGGCTGGAGGAAATGACGCTCTAGCGTTGCTGCTAA
CGGTGACAACGAACCTGTTGGGTGTCATAAGTGTACCGTTTTTCGTGAAG
GCTGTGTTGAGGTCATCAGGGGGCGCATCAATCGACGCGGTGAAGCTGCT
GATCAAATTGGTCGTGGCCGTACTGATCCCTTTGGTGATAGGTAAATTGG
TGCGAGAGGCGATTCCGGGGGCAAAGCCGTGGGTCAAGAAATGGAAGGTG
TGGCTGAGCTTAACGAGCACCGGAATGCTGGTCATGGTGGTGTGGCAAAC
GCTGAGCAGGGCTCAAGACACCATCACGTCAGTGAATTTTACGGAGATAT
TATCCGTCATCGCCGCCGGTATCGGGCTCCACTTTGTGTCGTGGCCGTAC
TGATCCCTTTGGTGATAGGTAAATTGGTGCGAGAGGCGATTCCGGGGGCA
AAGCCGTGGGTCAAGAAATGGAAGGTGTGGCTGAGCTTAACGAGCACCGG
AATGCTGGTCATGGTGGTGTGGCAAACGCTGAGCAGGGCTCAAGACACCA
TCACGTCAGTGAATTTTACGGAGATATTATCCGTCATCGCCGCCGGTATC
GGGCTCCACTTTGTATACCTGGCCATAAACTGGCCGGCGTGCACCCTGCT
CAAGCTGAAGCGGCGAGAGTTCAAAGCCGTCGTGCTCATGACCTCGCAGA
AGACGTTGCCCGTTACTGTGACCGTGATATCTTTCCTTAGCAGCTTGGGC
GCGGAAGGCTTGATGACGATACCTGGCCTCGTGGCGCACATGTCGCAACT
CTTTATCGACGCCTACATCGCTGCGCGCTGGGCAGACGACGAACCGGATC
AGGCGCTCGCCAAGAGTAATGGATCCAAGGGTGGGGTCGGCATGACCGCG
CAAGCCACCGTGTAAATACCTGGCCATAAACTGGCCGGCGTGCACCCTGC
TCAAGCTGAAGCGGCGAGAGTTCAAAGCCGTCGTGCTCATGACCTCGCAG
AAGACGTTGCCCGTTACTGTGACCGTGATATCTTTCCTTAGCAGCTTGGG
CGCGGAAGGCTTGATGACGATACCTGGCCTCGTGGCGCACATGTCGCAAC
TCTTTATCGACGCCTACATCGCTGCGCGCTGGGCAGACGACGAACCGGAT
CAGGCGCTCGCCAAGAGTAATGGATCCAAGGGTGGGGTCGGCATGACCGC
GCAAGCCACCGTGTAA
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