mRNA_H-paniculata_contig2738.7494.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: A0A6H5L973_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L973_9PHAE) HSP 1 Score: 569 bits (1467), Expect = 6.970e-198 Identity = 301/416 (72.36%), Postives = 336/416 (80.77%), Query Frame = 1
Query: 127 MKASTVTRCVMLGCAAAAPVAAFTVGPAAMGGLTAGVASTGFRGRARSAPQQQAYGRRNRAAVVADVRMMAVDLAAVHSLGDYVNVVSSAGMDQAWLSHVVHGISDAAAVTADAAKDEAQQGPNPFVLWIEFIRSSVLNINEFYKGVGIEQSFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTFQNGRGIGWLTHWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSLKTVLQYLPVLIGWFSLNVPSALGVYWLANNLSTTATSATIKGYYKMNPPQMEIPEDILEGPAAEYALPTIAEALEDAKVNAWPDRTSRRYA 1374
M+A+T + +LGCAA AP AAFT G G AR+A + R A+ A VRMMA+D A VHS+G++VN V SAG+D WLSHV+HG+SDAAAV +A ++EA+ GPNPF LWIEFIRSSVL IN+FYKG+GIEQSFGLAI+TFTL VK LLVPLQ IQLQSSEKM L PTVKEINAKFG NKEAA AATNRLY KVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLW+PSLQGPTF+NGRGIGWLT ++DG P LGWHDTLCYMSIPAILV+SQKLSMTLL PP DD D + SSLKTV+ YLPVLIGWFSLNVPSALG+YWLANNLSTTATS IK ++KMNPP+M IP DIL+ P A+YALPT+AEALEDAKVNAWPDR SRRYA
Sbjct: 1 MRAATA-KAALLGCAAIAPTAAFT----------------GGAGLARAAGGRD----RRAASSTAGVRMMAIDPATVHSIGEHVNAVGSAGLDHTWLSHVMHGLSDAAAVPLEAVEEEAK-GPNPFSLWIEFIRSSVLGINDFYKGIGIEQSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMQVLQPTVKEINAKFGQNKEAATAATNRLYAETKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWLPSLQGPTFENGRGIGWLTTFVDGHPILGWHDTLCYMSIPAILVLSQKLSMTLLTPP--DDGPDDATGSSLKTVITYLPVLIGWFSLNVPSALGIYWLANNLSTTATSFAIKAFFKMNPPEMNIPSDILDSPTADYALPTVAEALEDAKVNAWPDRRSRRYA 392
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: D7FS38_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS38_ECTSI) HSP 1 Score: 414 bits (1064), Expect = 1.060e-137 Identity = 232/327 (70.95%), Postives = 258/327 (78.90%), Query Frame = 1
Query: 127 MKASTVTRCVMLGCAAAAPVAAFTVGPAAMGGLTAGVASTGFRGRARSAPQQQAYGRRNRAAV-VADVRMMAVDLAAVHSLGDYVNVVSSAGMDQAWLSHVVHGISDAAAVTADAAKDEAQQGPNPFVLWIEFIRSSVLNINEFYKGVGIEQSFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTFQNGRGIGWLTHWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSLK 1104
M+A+T T +LGCAA AP AAFT GG+ G+A T A GR RAA A VRMMA+D A VHS+G++VN V SAG+D WLSHV+HG+SDAAAV +A ++EA+ GPNPF +WIEFIRSSVL INEFYKG+GIEQSFGLAI+TFTL VK LLVPLQ IQLQSSEKM L PTVKEINAKFG NKEAA AATNRLY KVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVA+EGFLW+PSLQGPTF+NGRGIGWLT ++DG P LGWHDTLCYMSIPAILV+SQKLSMTLL PP DD D + SSLK
Sbjct: 1 MRATTAT-AALLGCAAIAPTAAFT------GGV--GLART-------------AGGRDRRAASSTAGVRMMAIDPATVHSIGEHVNAVGSAGLDHTWLSHVMHGLSDAAAVPLEAVEEEAK-GPNPFNMWIEFIRSSVLGINEFYKGIGIEQSFGLAIVTFTLGVKTLLVPLQAIQLQSSEKMKVLQPTVKEINAKFGQNKEAATAATNRLYAETKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVASEGFLWLPSLQGPTFENGRGIGWLTTFVDGHPILGWHDTLCYMSIPAILVLSQKLSMTLLTPP--DDGPDDATGSSLK 302
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: A0A836CB90_9STRA (60Kd inner membrane protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB90_9STRA) HSP 1 Score: 306 bits (784), Expect = 1.020e-95 Identity = 157/333 (47.15%), Postives = 221/333 (66.37%), Query Frame = 1
Query: 382 VVSSAGMDQAWLSHVVHGISDAAAVTADAAKDEAQQGPNP-FVLWIEFIRSSVLNINEFYKGVGIEQSFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTFQNGRGIGWLT-HWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSLKT--VLQYLPVLIGWFSLNVPSALGVYWLANNLSTTATSATIKGYYKMNPPQMEIPEDILEGPAAEYALPTIAEALEDAKVNAWPDRTSRR 1368
V S +DQ+WLSHV GI+DA A D Q + F ++ + + I+ Y+ +GI+ +FGL+I+TFT+ VK +L+PL F+QLQS+EKM + P K+I + +K +RLY+ KVNPL GCLP+ Q PVFIGLYR++ + V NE FLWIP+LQGP F GRG+ WLT +W+ P LGW DT+ Y SIP +LV+SQ +SM +L+PP DP + S+++T VL+YLP++IGWFSL VP+ALGVYW+ NN+ +T + +IK Y K NPPQ++IPEDIL+ PA + LP++ +A+ +A++NA P R RR
Sbjct: 12 VSSVLDVDQSWLSHVASGIADATAAVQDGVDGVVQAKKDDWFAQFVNQFEAIIKGIDAGYEKIGIQNAFGLSIVTFTVLVKTVLLPLNFLQLQSAEKMQQITPVQKKIAEMYPDDKATQQIIVSRLYEQTKVNPLAGCLPSFAQIPVFIGLYRSLQQLAAENVVNEPFLWIPNLQGPVFDKGRGVQWLTENWVGLTPSLGWADTIAYCSIPILLVLSQSISMKMLSPPV-----DPKDESAMRTQQVLKYLPLMIGWFSLQVPAALGVYWMTNNIVSTTATQSIKAYLKANPPQLDIPEDILK-PAQKSGLPSLEQAILEARINARPSRLPRR 338
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: A0A4D9CYJ8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYJ8_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.950e-77 Identity = 137/334 (41.02%), Postives = 205/334 (61.38%), Query Frame = 1
Query: 400 MDQAWLSHVVHGISDAAAVTADAAK-------DEAQQGPNPFVLWIEFIRSSVLNINEFYKGVGIEQSFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTFQNGRGIGWL-THWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSLKTVLQYLPVLIGWFSLNVPSALGVYWLANNLSTTATSATIKGYYKMNPPQMEI---PEDILEGPAAEYALPTIAEALEDAKVNAWPDRTSRR 1368
+D AWLSHV G++DAA + DA D A + P F ++ + ++ ++ +G+ ++GLAI+ FT VK L+P+ + Q++S+++M ALAP KE+ K+G NK N T +LY+ +VNPL GCLPAL Q P+FI LYR++I ++ NE FLW+PSL GP + RG WL +W+DG P LGWHDT+ +++IP IL+++Q +S LL PP SDDP ++ + VL+YLP+++G+FSL+VPS LGVYW+ NNL +TA S +IK + P +++ PED+ P+ E + +A NA P +R
Sbjct: 20 LDPAWLSHVFQGVADAAMTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPP-SDDPK----TAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPEDLGYDPST--VAMGFEEMMAEATRNALPSEQPKR 346
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: W7TN75_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN75_9STRA) HSP 1 Score: 261 bits (666), Expect = 2.430e-76 Identity = 137/334 (41.02%), Postives = 205/334 (61.38%), Query Frame = 1
Query: 400 MDQAWLSHVVHGISDAAAVTADAAK-------DEAQQGPNPFVLWIEFIRSSVLNINEFYKGVGIEQSFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTFQNGRGIGWL-THWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSLKTVLQYLPVLIGWFSLNVPSALGVYWLANNLSTTATSATIKGYYKMNPPQMEI---PEDILEGPAAEYALPTIAEALEDAKVNAWPDRTSRR 1368
+D AWLSHV G++DAA + DA D A + P F ++ + ++ ++ +G+ ++GLAI+ FT VK L+P+ + Q++S+++M ALAP KE+ K+G NK N T +LY+ +VNPL GCLPAL Q P+FI LYR++I ++ NE FLW+PSL GP + RG WL +W+DG P LGWHDT+ +++IP IL+++Q +S LL PP SDDP ++ + VL+YLP+++G+FSL+VPS LGVYW+ NNL +TA S +IK + P +++ PED+ P+ E + +A NA P +R
Sbjct: 122 LDPAWLSHVFQGVADAAVTSLDATNAAVDATTDAAAKEPGFFDKFVNTVMGAIEGVHSELVSLGVPGAYGLAIILFTAGVKLALLPVTYKQMESAQRMQALAPKAKELKDKYGKNKALLNQLTAKLYEDAEVNPLAGCLPALAQIPIFIALYRSLINLAGNSDFNEPFLWLPSLAGPLYGQARGTDWLFKNWVDGVPALGWHDTIAFLTIPVILILTQSISQRLLTPP-SDDPK----TAQTQRVLKYLPIMVGYFSLSVPSGLGVYWITNNLISTAISISIKEKFAKQPIVIDVDVDPEDLGYDPST--VAMGFEEMMAEATRNALPSEQPKR 448
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: F0Y1Y4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1Y4_AURAN) HSP 1 Score: 251 bits (642), Expect = 2.540e-74 Identity = 129/276 (46.74%), Postives = 190/276 (68.84%), Query Frame = 1
Query: 565 VGIEQ-SFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTFQNGRGIGWLT-HWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSLKTVLQYLPVLIGWFSLNVPSALGVYWLANNLSTTATSATIKGYYKMNPPQM--EIPEDILEGPAAEYALP-TIAEALEDAKVNAWPDRTSRRYAM 1377
+GI+Q S+G++I+ FT ++ ++ PL FI +S+E+ AL P + +I ++G +++A N AT +LY+ + NPL GCLPA+ Q PVFI LYR+++ D EGF ++P+L+GPT+ NGRGI WLT +W+DG P LGWHDTL ++++P LVI+Q +SM +L PP DP+D S + + VL+YLP++IGWFS NVPS LG+YW+ +N+ + A S K Y K NPP++ E+ E L+ +A LP T+ EAL +A+VNA PDRT R +
Sbjct: 61 LGIKQNSWGISIILFTAFLRTVIYPLNFISYESTERNKALKPYMDKIKDRYGEDQQAVNLATAKLYEMTETNPLAGCLPAIAQIPVFIALYRSVLNLAFDQKIGEGFFFVPNLEGPTYDNGRGIQWLTDNWVDGVPSLGWHDTLAFLALPVALVITQSISMRVLTPPP--DPNDKS-AQNANRVLKYLPLMIGWFSANVPSGLGLYWMTSNVFSVAGSLGAKAYLKANPPKLDVELRELGLDDESAGVKLPATLEEALVEARVNARPDRTPLRRGV 333
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA) HSP 1 Score: 253 bits (647), Expect = 2.720e-74 Identity = 127/282 (45.04%), Postives = 180/282 (63.83%), Query Frame = 1
Query: 385 VSSAGMDQAWLSHVVHGISDAAAVTADAAKDEAQQGPNPFVLWIEFIRSSVLNINEFYKGVGIEQSFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTF--QNGRGIGWLTHWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSLKTVLQYLPVLIGWFSLNVPSALGVYWLANNLSTTATSATIK 1224
++ G+D L V G++DA A TADAA D A F + +++ +++ KG G+EQS+G AI+ FTL +K + PL + QL S+ KM L P VK+I + +N EAAN A LY +VNPL GCLP+L Q P+FI LYRA++ + +EGFLW+PSL+GP F + W+ W +G P LGWHDTLCY+SIP ILVI+Q +S L++PP+ + + + + + +L+YLP+LIGWFSLNVPS LG+YW+ NN+ +TA S I+
Sbjct: 59 LADGGIDFTVLHQVFSGLADATAATADAAADAAANNGGVFAGLVTATEAAITMLHDALKGAGVEQSYGYAIIGFTLFIKGVTFPLTYQQLASTTKMQTLQPKVKDIQKRLANNPEAANKAIADLYKEEEVNPLSGCLPSLAQIPIFISLYRALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTWENGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKKEG----AEADTSQAILKYLPLLIGWFSLNVPSGLGLYWIVNNIVSTAASVLIR 336
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: A0A7S3NMM5_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NMM5_9STRA) HSP 1 Score: 252 bits (644), Expect = 1.410e-73 Identity = 126/275 (45.82%), Postives = 184/275 (66.91%), Query Frame = 1
Query: 574 EQSFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTFQNGRGIGWLT-HWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSLKT--VLQYLPVLIGWFSLNVPSALGVYWLANNLSTTATSATIKGYYKMNPPQMEIP-EDI-LEGPAAEYALP-TIAEALEDAKVNAWPDRTSRRYAMM 1380
E ++G I+ FT + L PL +I SS+++ AL P +++I ++ ++ A N AT +LY+ NPL GCLP++ Q PVFI LYR+++ + NE F W+PSL+GPTF GRGIGWLT +W+DG P LGWHDTLCY+ +P LVI+Q LSM ++ PP DP++ +++T +L+YLP++IGWFS NVP+ LG+YW+ +NL + +S K Y K NPP+++I D+ L+ +A LP TI EA+ +AK+NA PDRT RR ++
Sbjct: 117 ENTYGWTIILFTFLCRMLTFPLNYISYASSDRVKALKPYMEKIKERYAEDQTAQNIATAKLYEMSATNPLAGCLPSIAQIPVFIFLYRSVLNLAFENELNEPFFWLPSLEGPTFDAGRGIGWLTENWVDGTPSLGWHDTLCYLLVPIALVITQSLSMQIMQPPV-----DPNDEGAVRTQRILKYLPLMIGWFSANVPAGLGLYWMTSNLVSVGSSVATKAYLKANPPELDIKLADLGLDDGSAGVKLPNTIEEAIAEAKINAAPDRTPRRPGLV 386
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI) HSP 1 Score: 249 bits (637), Expect = 1.460e-72 Identity = 136/327 (41.59%), Postives = 197/327 (60.24%), Query Frame = 1
Query: 397 GMDQAWLSHVVHGISDA--AAVTADAAKDEAQQGPNPFVLWIEFIRSSVLNINEFYKGVGIEQSFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTFQNG--RGIGWLTHWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSL--KTVLQYLPVLIGWFSLNVPSALGVYWLANNLSTTATSATIK-------GYYKMNPPQMEIPEDILEGPAAEYALPTIAEALEDAKV 1338
G+D AWL V+ GI+D AA A+ A G +P L ++ +++ +G+ ++G++I+ FTL VK + PL + QL S+ KM L P VKE+ A++ +N EAAN A +LY + VNPL GCLPAL Q P+FI LYR+++ + E FLWIPSL+GPTF + + W+ W DGAP LGWHDT+ YM+IP ILVI+Q +S ++ P + DPS P + S + ++++LP++IGWFSL+VPSALG+YW+ NN +TATS I+ G M P++ +P +E +P EAL D+ V
Sbjct: 72 GVDPAWLHQVLTGIADGDVAAAVAEEAAXXXXXGFHPIQLLTGVTEGAITGLHDVLASMGVPSAYGISIICFTLFVKGITFPLTYQQLSSTTKMQTLGPKVKELQARYANNPEAANQAVQQLYQTENVNPLAGCLPALAQIPIFISLYRSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQP--AKDPSQPVDESQAASQNIVKFLPLMIGWFSLSVPSALGLYWILNNFISTATSVFIRNQIADETGDPNMKAPKITLP--FMEEEPEVVTMPIPREALPDSAV 394
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Match: A0A8J6C7A1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C7A1_DIALT) HSP 1 Score: 246 bits (629), Expect = 1.730e-72 Identity = 132/311 (42.44%), Postives = 192/311 (61.74%), Query Frame = 1
Query: 385 VSSAGMDQAWLSHVVHGISDAAAVT----ADAAK-----DEAQQG------PNPFVLWIEFIRSSVLNINEFYKGVGIEQSFGLAIMTFTLTVKALLVPLQFIQLQSSEKMAALAPTVKEINAKFGSNKEAANAATNRLYDSCKVNPLIGCLPALLQFPVFIGLYRAIIGFGTDAVANEGFLWIPSLQGPTFQNGRGIGWLT-HWIDGAPPLGWHDTLCYMSIPAILVISQKLSMTLLAPPESDDPSDPSNSSSLKTVLQYLPVLIGWFSLNVPSALGVYWLANNLSTTATSATIKGYYKMNPPQMEIPED 1269
V++ +D + + +VHG+ DA T ADAA D A G PN F ++ IR+S+++++E G+ ++ +I FTL VK ++PL + Q++ + M LAP K++ FG N +A T+ LY +VNPL GCLP+LLQ PVFIGLYRAIIG D V +E FLWIP+L+GP + G G+GWLT +W+DG P LGWHDTLCY+++P +LV+SQ LSM +L PP + S ++ + +L++LP +IGWF+L+ P+ LG+YW NN+ TTA S I+ P Q P++
Sbjct: 46 VAARMVDASAVHSLVHGLPDALGATHALLADAAAAAPPADVASAGTGAASDPNIFDQYVSLIRTSIVSLHESLFTAGVPYAYAASIFLFTLCVKLFVLPLNWKQMEGTVAMQKLAPQQKQLQKWFGDNPQALQIQTSMLYSENQVNPLAGCLPSLLQIPVFIGLYRAIIGLSKDNVLSESFLWIPTLEGPVSEYGAGLGWLTDNWVDGHPSLGWHDTLCYLTLPLVLVLSQSLSMRILTPPTVGETSP--DAERTQQILKFLPFMIGWFALSAPAGLGLYWFFNNVITTAQSIFIRSMLGAYPGQGSAPDE 354 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2738.7494.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2738.7494.1 >prot_H-paniculata_contig2738.7494.1 ID=prot_H-paniculata_contig2738.7494.1|Name=mRNA_H-paniculata_contig2738.7494.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=419bp MKASTVTRCVMLGCAAAAPVAAFTVGPAAMGGLTAGVASTGFRGRARSAPback to top mRNA from alignment at H-paniculata_contig2738:313..11442+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2738.7494.1 ID=mRNA_H-paniculata_contig2738.7494.1|Name=mRNA_H-paniculata_contig2738.7494.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11130bp|location=Sequence derived from alignment at H-paniculata_contig2738:313..11442+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2738:313..11442+ >mRNA_H-paniculata_contig2738.7494.1 ID=mRNA_H-paniculata_contig2738.7494.1|Name=mRNA_H-paniculata_contig2738.7494.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2514bp|location=Sequence derived from alignment at H-paniculata_contig2738:313..11442+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |