prot_H-paniculata_contig2733.7483.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI) HSP 1 Score: 892 bits (2304), Expect = 0.000e+0 Identity = 495/629 (78.70%), Postives = 539/629 (85.69%), Query Frame = 0
Query: 1 MNFPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLPPVRLDGFSKAQYADVDKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSR 629
MNF KIG+QG+SLG+LQL++EEL WTS DKSS+KKVKW VSHATWAQ+A YCHLRLF++ D PVRLDGFSKAQ+AD++KFLS+ D+ LS + N GGGNYG++EVLDNIVRFSS N+TLFDLNIKDVSQCVMPGVKKSNDVELQ HESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNE+QGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMSA+DLQ+KY+ NLNSEM GPLHNLIAKIFKVLSNKPVYVTGKFSS +GAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEI+SVEFQRYGGAQGAGVTRNFDLCVAPKSVAGE KPY+FSGIDRSEY+SLYSFLSTKKLRIKNIK++GND +MLQLGDLDDHDPYKAALDDDQG+ XXXXX XXXXXXXXXXXXXXXXXXXXXX K+SKK+ Q+ KKD +APKGA SAFMQFS A RA+VK PELK TEISKVLGE+WGK+D + PY DKA DK RYKRE + Y S+
Sbjct: 1 MNFSKIGVQGYSLGNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSKAQHADIEKFLSERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAH--KTSKKRPGTGS----AKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSK 623
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE) HSP 1 Score: 580 bits (1495), Expect = 2.020e-200 Identity = 346/496 (69.76%), Postives = 369/496 (74.40%), Query Frame = 0
Query: 119 RTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAK----IFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERP-----------------------KSSKKK------KEAAVPXXXXXXXXXQRA-----KAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAE 576
RTLFDLNIKDVSQCVMPGVKKSNDVELQ HESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNE+QGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMSA+DLQ+KY+ NLNSEM GPLHNL+AK IFKVLS+KPVYVTGKFSS +GAKAVKCALGANEG+LYPLNK GAGVTRNFDLCVAPKSVAGE KPY+FSGIDRSEY+SLYSFLSTKKLRIKNIK+ GND +MLQLGDLDDHDPYKAALDDD+G+ XXXXXXXXXXXXXXXX K+SKKK K+ A + SGG SKP KK+ KKD +APKGA SAFMQFS A RA+
Sbjct: 3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQ 469
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA) HSP 1 Score: 451 bits (1159), Expect = 1.340e-147 Identity = 315/662 (47.58%), Postives = 393/662 (59.37%), Query Frame = 0
Query: 3 FPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDL-PPVRLDGFSKAQYADVDKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTD--------------EPSP---AESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQK-------------KDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSRTQE 632
F IGIQGHS+GS++ S E ++W S+D+SS +KV W+ ATWA F +Y HLR+F+++ PPVR DGF +A + + + L+ I+LS+D+ D LV +R+ LP++ ED D + P AE+ AV++RANI DVKG VL E + + GTF PRGRY++EMYS F+RMHGS+YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E + +NMS +LQ+KY G L M G L NLIAKIFK LS + V+VTG + S +GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE++SVEFQRY G Q V R+FDLCV +S++GE +K Y FSGIDRSEY SLY + TK LRIKNIK +G+ + +D D + +G+ XXXXXXXXXXXXXXXXXXXXXX XXXXXXXXX SKP K++ KDPNAPKGA SAFM FS R +V QP LK TE+SKVLGERW M AE + + DKA DK RY EM++YKS Q+
Sbjct: 9 FKGIGIQGHSVGSVKFSDEGVMWASSDRSSQQKVLWSKAEKATWAVFGKYAHLRMFMKDPADPPVRFDGFQRADFDRLKEALAAHSIKLSRDK---------------------------------------------------------------DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGDKVASALAEAMDSADVRE------EGEIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRKAPAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKARYGTEMQEYKSAQQQ 601
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA) HSP 1 Score: 391 bits (1004), Expect = 5.200e-125 Identity = 214/466 (45.92%), Postives = 297/466 (63.73%), Query Frame = 0
Query: 6 IGIQGHSLGSLQLSSEELVWTSA------DKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLPPVRLDGFSKAQYADVDKFLSKL-DIRLSKDRINAGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQN 444
IG+ GHS+G+ ++ + W SA D +++ + V A W F HLR+ N R DGF + + V +++ D+ +K ++ G ++G E+ D + F E + + + +VSQCV+PG + N++ELQFHESD + D LVAIR +P E D D P+ AE +++ A I + G V+VEF+EN+GTF PRGRY IE+Y F+RM G++YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ +E+ VN+ +L+++Y G L M G L NLIAK FK+++ K V++ GKF + VKCAL ANEGHLYPL KSF+FIHKP +I FDE+DSVEFQRY G QG+ TRNFDLCV S AG+ K YIFSGIDRS+YTSLY+FLS KK++IKNI+++
Sbjct: 15 IGLHGHSVGTFMADAQGIKWKSALLTDDDDVVTSRSISKKHVIGARWTIFGRSGHLRIQTPNT--EFRFDGFPYSDFDKVRDIMNEYYDVETNKLPMSTAGNSFGLTEIEDRNLAFKQCILEDADEEGEEFEPREGDEMMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQES 475
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA) HSP 1 Score: 400 bits (1028), Expect = 1.310e-124 Identity = 258/670 (38.51%), Postives = 369/670 (55.07%), Query Frame = 0
Query: 6 IGIQGHSLGSLQLSSEELVWTSA--------DKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLP---PVRLDGFSKAQYADVDKFLSKL-DIRLSKDRINAGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLP-EKDEDTDE---PSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGND---------------GSMLQLGDLDD--HDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKY 626
IG+ GHS+G+ + L W SA D SS++ + T+ A W F H+R+ + P +R DGF A + + L +L D+ L+K +++ G ++G ++ D + F + + N+K++SQCV+PG + N++E+QFHESDA + D LVAIR +P + D D E +PAE Q +++ ANI G V+VE E +GTF PRGRY+IE+Y F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD AE+ VN+ + L+++YNG+L M G L NL+AK FK+++ K V++ GKF++ + VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+ TRNFDLCV+ + TK YIFSGIDRS+YT LY+FLS KK++IKN++ N D G G++++ D D++ + + KS+K P XXX K KKK DP APK SA+ F +A R ++K P+ E+S + G+ W K+ E + Y A D R+KREM Y
Sbjct: 10 IGLHGHSVGTFTADPDGLRWKSAVMGGGDNDDISSSRVLPAKTLVAAKWTVFGRSGHVRVRSKASDPVNAELRFDGFPAADFDRLRDVLKRLFDVDLTKHAMSSAGTSFGLTDIEDGNMVFRQCILEDADEEGEEFEPRDGDEMMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAARFKREMADY 676
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA) HSP 1 Score: 385 bits (988), Expect = 4.110e-121 Identity = 285/630 (45.24%), Postives = 386/630 (61.27%), Query Frame = 0
Query: 34 KKVKWATVSHATWAQFAEYCHLRLFL-----QNDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSS---ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVT--KPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDP-YKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSRTQEGANGRRKGKADG 644
K + + A W F + HLR+ + +N +R DGF A + D+ D F DI +SK I++ G YG+ ++ + F E RT + L++ +VSQCV+PG + N+VELQF ESDA + D LV++R+ +P E D + AE LQ +++ ANI G V+VEF+ +G+F PRGRYSIE+Y F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD E+ VN+ D L+++Y +L M G L NL+AK FKV++ K V++ GKFS+ + VKCAL ANEG LYPL K FIFIHKP +I F+E++SVEFQRY G QG+ TRNFDLCV K+ A ++ + Y+FSGIDRS+YT LY+FLSTK +RIKN+++ G++ Q+ + + D Y DD + XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX V PS +KKK KKDPN PK A SA+M +S+ R VK P K +++K++ + K+ + A + ++KERY REM+ Y G +G KG G
Sbjct: 1 KNIPKGNIEKAGWTVFGKSGHLRIGVIVKEGKNGPSELRFDGFPVASFDDLKDFFQENYDIEVSKHNISSAGTQYGQSKISGKKLLFQHCEFEVRTGDEMMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTSAELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQEIS--GAVEQVAPVYNEDEIYGGPADDMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKV-----------------ADIPSPTISKKKAKKDPNKPKQALSAYMVYSNLNRERVKKENPSAKFGDMAKLIAADYKKLSGDELADVEKRVIKEKERYAREMKDYIPSAGFGEDGVEKGATSG 608
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA) HSP 1 Score: 385 bits (990), Expect = 2.620e-120 Identity = 294/666 (44.14%), Postives = 394/666 (59.16%), Query Frame = 0
Query: 6 IGIQGHSLGSLQLSSEELVWTSA-------DKSSAKKVKWATVSHATWAQFAEYCHLRLFLQ------NDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSS-------------ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVT--KPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQ-NGNDGSMLQLGDLD------DHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERP-KSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYK 627
IG+ GHS+G+ + W SA + + + + + A W F + HLRL + N +R DGF A + ++ D F I +SK I++ G YG+ ++L + F E RT + L++ +VSQCV+PG + N+VELQF ESDA + D LV+IR +P E D S AE LQ +++ ANI G V+VEF+ +G+F PRGRYSIE+Y F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD EI VN+ D L+++Y +L M G L NL+AK FKV++ K V++ GKFS+ + VKCAL ANEG LYPL K F+FIHKP +I F+E++SVEFQRY G QG+ TRNFDLCV+ K+ A V+ + Y+FSG+DRS+YT LY+FLSTK +RIKN+++ G + D D DH+ + + D+ + XXXXXXX XXXXXXXXXXXXXXXXXXXX R K XXXXXXXXX KKDPN PK A SAFM FS+A RA VK P+ K E++K+L + + + A K ++K+RY+REME YK
Sbjct: 10 IGLHGHSVGTFACGEAGVQWKSALYGRDDTGSGTTRNIPKSLIERAAWTVFGKSGHLRLKVAQQEGKANLHHEMRFDGFPVAAFDNLKDVFQDTYGIEVSKHNISSAGTQYGQSKILGKKLVFQHCILEDADEEGEEFEVRTGDEMMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQEIAGVQEKAAPVYDEDEIYGGPDHEMLEESEDESYDEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLEEARGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGSXXXXXXAKKDPNKPKRAQSAFMIFSNANRARVKEENPDAKFGEMAKLLSAEYKNLSKDELAELDKKVEKEKKRYEREMENYK 672
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC) HSP 1 Score: 380 bits (976), Expect = 7.290e-118 Identity = 258/664 (38.86%), Postives = 376/664 (56.63%), Query Frame = 0
Query: 6 IGIQGHSLGSLQLSSEELVWTSA-----DKSSAKKVKWATVSHATWAQFAEYCHLRLFL-------QNDLPP-VRLDGFSKAQYADVDKFLSKL-DIRLSKDRINAGGGNYGELEVLDNIVRFSSENRT----------------LFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEV--TKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPS-------KPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKY 626
IG+ GH++G+ + ++W S+ D + + + ++S A W F + HLR+ Q LP +R DGF Y + + L L + L + +++ G ++G ++ + + F N + L++ +VSQCV+PG + N++E+QF ESD + D LVA+R +P + D D P+ AE+LQ +++ A++ G ++ EF+E +GTF PRGRYSIE+Y F+R+ G++YDYKI+Y+DIS+LFLL + D+ VAFV++LDKPIRQGQQ+Y LV++ TK+ +E+ +N+ L+++Y G + M G NL+AK FKV++ K V++ GKF++++ VKCAL ANEGHLYPL K FIFIHKP +I FDEI+SVEFQRY G QG+ TRNFDLCV+ S G+ TK Y FSGID+S Y +LYSFLS KK++IKN++ G + D+ DD++ D XXXXXXXX R K XXXXXXXXX +P +DPNAPK SA++ F+SAKR+E+K A P+ +ISK+LG+ + ++ + PY + A +DK RYKREME Y
Sbjct: 11 IGLYGHAVGTFSATRHGIMWKSSVMGNDDIETKRVLPRESISGALWTVFGKSGHLRVLTKAPREGEQTKLPAAMRFDGFPGTDYEAMSEALRDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADEDGQEFEPRDGDEMMSLDLGEVSQCVLPGNNR-NEIEMQFLESDTVEAGTDQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKKPGAPRYDER-----MSDDEESDDSDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKARYKREMEDY 666
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A448Z7B6_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7B6_9STRA) HSP 1 Score: 379 bits (972), Expect = 1.220e-117 Identity = 286/673 (42.50%), Postives = 398/673 (59.14%), Query Frame = 0
Query: 6 IGIQGHSLGSLQLSSEELVW---------TSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQ------NDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVA--PKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERP--------------KSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKY 626
IG+ GHS+G+ + + W T +S + V ++ A W+ F + HLRL ++ N +R DGF + Y + D F + I L K +++ G YG ++ + F + + L++ +VSQCV+PG + N+VELQF ESDA + D LV++R +P E D S AE LQ +++ ANI G V+VEF+ +G+F PRGRYSIE+Y F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD E+ VN+ D L+++Y +L M G L NL+AK FK+++ K V++ GKFS+ + VKCAL ANEG LYPL K F+FIHKP +I F+E++SVEFQRY G QG+ TRNFDLCV+ P + + + Y+FSG+DRS+Y LY+FLSTKK+RIKN+++ G G Q + + D D + +XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX KS +K + XXXX + K V P KK KKDPN PK ++AFM FS+ R + P+L +++K++G+++ ++ E A K +DK RY+REM+ Y
Sbjct: 14 IGLHGHSVGTFACTDAGIQWKSSLYGREDTGGLSASTRNVPKDSIEKAGWSVFGKSGHLRLNMEPKEGSSNTQHEMRFDGFPVSAYETMKDIFQASYGIELLKLNMSSAGTQYGRSKISGKKLVFRHCVLEDADEEGEEFEVRDGDEMMSLDLTEVSQCVLPGNNR-NEVELQFPESDAVEANNDQLVSVRFFIPPDPEVDPSDKTIKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKIIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKPNAPSAGNQQEYVFSGVDRSDYAGLYNFLSTKKIRIKNLQEIG--GVQEQAVPVYNEDEIYGGPDHEMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEARGGSGSKSKRKSNXXXLIEDDLPXXXXGKKKVVET-----KPVSKKLKKDPNKPKQVTTAFMIFSNTNRERFRTENPDLNFGDLAKLIGKKYKELSKEELAELEKKVEKDKLRYEREMKNY 676
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: W7TS58_9STRA (FACT complex subunit SSRP1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS58_9STRA) HSP 1 Score: 370 bits (949), Expect = 9.630e-116 Identity = 266/655 (40.61%), Postives = 377/655 (57.56%), Query Frame = 0
Query: 3 FPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKK-SNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKL------------RIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKK---------DPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSRTQEGA 634
F IG+ G S+G+L + + L W S+AK V+ + A+W+ F ++ HLRLFL+N +R DGF + + V + F S + L ++ +N+GG NYG+L DN + S E++ + +L + VSQCV+PG N+VELQF E+DA D+ EDTLV +R +P +E+ D AE+ Q V+ R + G LV F E++G F +PRGRY I +Y++ R+HG++YD+K+ Y+DI FLLE+PD R+ AFV+ L KPIRQGQQ+Y +LVL+T +E+ VNM+ ++L++KY L M GP+H+L+AK FK+LS K VY + +F S + VKC+L A+EG LYPL+K+F+FI+KPT I F +I+SV F R GGA GVTR FDL V + + G+V + YIF+ I++ E+ +L +L K+ +I + + +G YK ++ G XXXXXXXXXX XXXXX E+ XXXXXXXXX G + K+K DPNAPK A SA+M F+ A R VKA QP LK TEISKV+GERW + AE + + D+A K RY E+ YK++ +E A
Sbjct: 7 FENIGLSGQSVGTLTFTGKGLEWRGP--SNAKTVQAKDILRASWSVFGKWGHLRLFLKNG-KALRCDGFLRTEEERVREVFQSNYSLSLEREVLNSGGANYGDLIFEDNTLVMSLEDKPVLELPLGAVSQCVLPGTGNIKNEVELQFVETDAADRDEDTLVEVRFYIPPGEEEDD---GAEAFQKNVLARTTVQASTGDALVTFAEDEGFFLYPRGRYVINLYTNSFRLHGAKYDHKMAYDDIIHFFLLERPDHRW-AFVIGLKKPIRQGQQRYNYLVLQTHDGASEVTVNMTEEELREKYEDRLEQTMAGPMHHLVAKTFKILSGKKVYHSQRFQSARNVRWVKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVSFDRVGGA--VGVTRTFDLRVLLRPLDGDVRREYIFAQIEKEEHANLSQYLRDKQTIKVIDDKPVSQAKIDRMLEEEEEGGXXXXXXXXXXXSYKG---EESGSXXXXXXXXXXXXXXXXSSGAEMVEESDLEEMTGIKKEKXXXXXXXXXXXXXXXXXXXXXXXXXSDAGTGGKKRKGKKEKXXXXXXXXXXXXDPNAPKQALSAYMLFTQASREAVKAEQPGLKVTEISKVMGERWRALSAEEKKVFEDQAASAKVRYGEELRAYKAKKKEEA 649 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig2733.7483.1 ID=prot_H-paniculata_contig2733.7483.1|Name=mRNA_H-paniculata_contig2733.7483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=653bpback to top |