prot_H-paniculata_contig2733.7483.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2733.7483.1
Unique Nameprot_H-paniculata_contig2733.7483.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length653
Homology
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 892 bits (2304), Expect = 0.000e+0
Identity = 495/629 (78.70%), Postives = 539/629 (85.69%), Query Frame = 0
Query:    1 MNFPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLPPVRLDGFSKAQYADVDKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSR 629
            MNF KIG+QG+SLG+LQL++EEL WTS DKSS+KKVKW  VSHATWAQ+A YCHLRLF++ D  PVRLDGFSKAQ+AD++KFLS+ D+ LS +  N GGGNYG++EVLDNIVRFSS N+TLFDLNIKDVSQCVMPGVKKSNDVELQ HESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNE+QGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMSA+DLQ+KY+ NLNSEM GPLHNLIAKIFKVLSNKPVYVTGKFSS +GAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEI+SVEFQRYGGAQGAGVTRNFDLCVAPKSVAGE  KPY+FSGIDRSEY+SLYSFLSTKKLRIKNIK++GND +MLQLGDLDDHDPYKAALDDDQG+     XXXXX XXXXXXXXXXXXXXXXXXXXXX      K+SKK+               Q+                  KKD +APKGA SAFMQFS A RA+VK   PELK TEISKVLGE+WGK+D   + PY DKA  DK RYKRE + Y S+
Sbjct:    1 MNFSKIGVQGYSLGNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSKAQHADIEKFLSERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAH--KTSKKRPGTGS----AKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSK 623          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 580 bits (1495), Expect = 2.020e-200
Identity = 346/496 (69.76%), Postives = 369/496 (74.40%), Query Frame = 0
Query:  119 RTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAK----IFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERP-----------------------KSSKKK------KEAAVPXXXXXXXXXQRA-----KAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAE 576
            RTLFDLNIKDVSQCVMPGVKKSNDVELQ HESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNE+QGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMSA+DLQ+KY+ NLNSEM GPLHNL+AK    IFKVLS+KPVYVTGKFSS +GAKAVKCALGANEG+LYPLNK                             GAGVTRNFDLCVAPKSVAGE  KPY+FSGIDRSEY+SLYSFLSTKKLRIKNIK+ GND +MLQLGDLDDHDPYKAALDDD+G+                    XXXXXXXXXXXXXXXX                          K+SKKK      K+ A                   +  SGG  SKP  KK+ KKD +APKGA SAFMQFS A RA+
Sbjct:    3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQ 469          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 451 bits (1159), Expect = 1.340e-147
Identity = 315/662 (47.58%), Postives = 393/662 (59.37%), Query Frame = 0
Query:    3 FPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDL-PPVRLDGFSKAQYADVDKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTD--------------EPSP---AESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQK-------------KDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSRTQE 632
            F  IGIQGHS+GS++ S E ++W S+D+SS +KV W+    ATWA F +Y HLR+F+++   PPVR DGF +A +  + + L+   I+LS+D+                                                               D LV +R+ LP++ ED D              +  P   AE+   AV++RANI DVKG VL E + + GTF  PRGRY++EMYS F+RMHGS+YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E  + +NMS  +LQ+KY G L   M G L NLIAKIFK LS + V+VTG + S +GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE++SVEFQRY G Q    V R+FDLCV  +S++GE +K Y FSGIDRSEY SLY +  TK LRIKNIK +G+  +      +D  D  +      +G+              XXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXX           SKP   K++              KDPNAPKGA SAFM FS   R +V   QP LK TE+SKVLGERW  M AE +  + DKA  DK RY  EM++YKS  Q+
Sbjct:    9 FKGIGIQGHSVGSVKFSDEGVMWASSDRSSQQKVLWSKAEKATWAVFGKYAHLRMFMKDPADPPVRFDGFQRADFDRLKEALAAHSIKLSRDK---------------------------------------------------------------DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGDKVASALAEAMDSADVRE------EGEIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRKAPAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKARYGTEMQEYKSAQQQ 601          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 391 bits (1004), Expect = 5.200e-125
Identity = 214/466 (45.92%), Postives = 297/466 (63.73%), Query Frame = 0
Query:    6 IGIQGHSLGSLQLSSEELVWTSA------DKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLPPVRLDGFSKAQYADVDKFLSKL-DIRLSKDRINAGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQN 444
            IG+ GHS+G+    ++ + W SA      D  +++ +    V  A W  F    HLR+   N     R DGF  + +  V   +++  D+  +K  ++  G ++G  E+ D  + F                  E   +  + + +VSQCV+PG  + N++ELQFHESD  +   D LVAIR  +P   E    D D P+ AE     +++ A I +  G V+VEF+EN+GTF  PRGRY IE+Y  F+RM G++YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ +E+ VN+   +L+++Y G L   M G L NLIAK FK+++ K V++ GKF +      VKCAL ANEGHLYPL KSF+FIHKP  +I FDE+DSVEFQRY G QG+  TRNFDLCV   S AG+  K YIFSGIDRS+YTSLY+FLS KK++IKNI+++
Sbjct:   15 IGLHGHSVGTFMADAQGIKWKSALLTDDDDVVTSRSISKKHVIGARWTIFGRSGHLRIQTPNT--EFRFDGFPYSDFDKVRDIMNEYYDVETNKLPMSTAGNSFGLTEIEDRNLAFKQCILEDADEEGEEFEPREGDEMMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQES 475          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA)

HSP 1 Score: 400 bits (1028), Expect = 1.310e-124
Identity = 258/670 (38.51%), Postives = 369/670 (55.07%), Query Frame = 0
Query:    6 IGIQGHSLGSLQLSSEELVWTSA--------DKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLP---PVRLDGFSKAQYADVDKFLSKL-DIRLSKDRINAGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLP-EKDEDTDE---PSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGND---------------GSMLQLGDLDD--HDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKY 626
            IG+ GHS+G+     + L W SA        D SS++ +   T+  A W  F    H+R+  +   P    +R DGF  A +  +   L +L D+ L+K  +++ G ++G  ++ D  + F                  +   +   N+K++SQCV+PG  + N++E+QFHESDA +   D LVAIR  +P + D D  E    +PAE  Q  +++ ANI    G V+VE  E +GTF  PRGRY+IE+Y  F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD AE+ VN+  + L+++YNG+L   M G L NL+AK FK+++ K V++ GKF++ +    VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+  TRNFDLCV+  +     TK YIFSGIDRS+YT LY+FLS KK++IKN++ N  D               G     G++++   D      D++  +                                     + KS+K       P      XXX            K   KKK   DP APK   SA+  F +A R ++K   P+    E+S + G+ W K+  E +  Y   A  D  R+KREM  Y
Sbjct:   10 IGLHGHSVGTFTADPDGLRWKSAVMGGGDNDDISSSRVLPAKTLVAAKWTVFGRSGHVRVRSKASDPVNAELRFDGFPAADFDRLRDVLKRLFDVDLTKHAMSSAGTSFGLTDIEDGNMVFRQCILEDADEEGEEFEPRDGDEMMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAARFKREMADY 676          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA)

HSP 1 Score: 385 bits (988), Expect = 4.110e-121
Identity = 285/630 (45.24%), Postives = 386/630 (61.27%), Query Frame = 0
Query:   34 KKVKWATVSHATWAQFAEYCHLRLFL-----QNDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSS---ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVT--KPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDP-YKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSRTQEGANGRRKGKADG 644
            K +    +  A W  F +  HLR+ +     +N    +R DGF  A + D+ D F    DI +SK  I++ G  YG+ ++    + F     E RT   +  L++ +VSQCV+PG  + N+VELQF ESDA +   D LV++R+ +P   E    D    + AE LQ  +++ ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD  E+ VN+  D L+++Y  +L   M G L NL+AK FKV++ K V++ GKFS+ +    VKCAL ANEG LYPL K FIFIHKP  +I F+E++SVEFQRY G QG+  TRNFDLCV  K+ A  ++  + Y+FSGIDRS+YT LY+FLSTK +RIKN+++    G++ Q+  + + D  Y    DD +  XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX             V                    PS   +KKK KKDPN PK A SA+M +S+  R  VK   P  K  +++K++   + K+  +  A    +  ++KERY REM+ Y      G +G  KG   G
Sbjct:    1 KNIPKGNIEKAGWTVFGKSGHLRIGVIVKEGKNGPSELRFDGFPVASFDDLKDFFQENYDIEVSKHNISSAGTQYGQSKISGKKLLFQHCEFEVRTGDEMMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTSAELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQEIS--GAVEQVAPVYNEDEIYGGPADDMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKV-----------------ADIPSPTISKKKAKKDPNKPKQALSAYMVYSNLNRERVKKENPSAKFGDMAKLIAADYKKLSGDELADVEKRVIKEKERYAREMKDYIPSAGFGEDGVEKGATSG 608          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA)

HSP 1 Score: 385 bits (990), Expect = 2.620e-120
Identity = 294/666 (44.14%), Postives = 394/666 (59.16%), Query Frame = 0
Query:    6 IGIQGHSLGSLQLSSEELVWTSA-------DKSSAKKVKWATVSHATWAQFAEYCHLRLFLQ------NDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSS-------------ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVT--KPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQ-NGNDGSMLQLGDLD------DHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERP-KSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYK 627
            IG+ GHS+G+       + W SA          + + +  + +  A W  F +  HLRL +       N    +R DGF  A + ++ D F     I +SK  I++ G  YG+ ++L   + F               E RT   +  L++ +VSQCV+PG  + N+VELQF ESDA +   D LV+IR  +P   E    D    S AE LQ  +++ ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD  EI VN+  D L+++Y  +L   M G L NL+AK FKV++ K V++ GKFS+ +    VKCAL ANEG LYPL K F+FIHKP  +I F+E++SVEFQRY G QG+  TRNFDLCV+ K+ A  V+  + Y+FSG+DRS+YT LY+FLSTK +RIKN+++  G       + D D      DH+  + + D+   +   XXXXXXX XXXXXXXXXXXXXXXXXXXX      R  K           XXXXXXXXX                    KKDPN PK A SAFM FS+A RA VK   P+ K  E++K+L   +  +  +  A    K  ++K+RY+REME YK
Sbjct:   10 IGLHGHSVGTFACGEAGVQWKSALYGRDDTGSGTTRNIPKSLIERAAWTVFGKSGHLRLKVAQQEGKANLHHEMRFDGFPVAAFDNLKDVFQDTYGIEVSKHNISSAGTQYGQSKILGKKLVFQHCILEDADEEGEEFEVRTGDEMMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQEIAGVQEKAAPVYDEDEIYGGPDHEMLEESEDESYDEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLEEARGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGSXXXXXXAKKDPNKPKRAQSAFMIFSNANRARVKEENPDAKFGEMAKLLSAEYKNLSKDELAELDKKVEKEKKRYEREMENYK 672          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC)

HSP 1 Score: 380 bits (976), Expect = 7.290e-118
Identity = 258/664 (38.86%), Postives = 376/664 (56.63%), Query Frame = 0
Query:    6 IGIQGHSLGSLQLSSEELVWTSA-----DKSSAKKVKWATVSHATWAQFAEYCHLRLFL-------QNDLPP-VRLDGFSKAQYADVDKFLSKL-DIRLSKDRINAGGGNYGELEVLDNIVRFSSENRT----------------LFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEV--TKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPS-------KPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKY 626
            IG+ GH++G+   +   ++W S+     D  + + +   ++S A W  F +  HLR+         Q  LP  +R DGF    Y  + + L  L  + L +  +++ G ++G  ++ +  + F   N                  +  L++ +VSQCV+PG  + N++E+QF ESD  +   D LVA+R  +P   +    D D P+ AE+LQ  +++ A++    G ++ EF+E +GTF  PRGRYSIE+Y  F+R+ G++YDYKI+Y+DIS+LFLL + D+  VAFV++LDKPIRQGQQ+Y  LV++ TK+ +E+ +N+    L+++Y G +   M G   NL+AK FKV++ K V++ GKF++++    VKCAL ANEGHLYPL K FIFIHKP  +I FDEI+SVEFQRY G QG+  TRNFDLCV+  S  G+   TK Y FSGID+S Y +LYSFLS KK++IKN++  G +         D+        DD++ D              XXXXXXXX               R K           XXXXXXXXX                   +P       +DPNAPK   SA++ F+SAKR+E+K A P+    +ISK+LG+ + ++    + PY + A +DK RYKREME Y
Sbjct:   11 IGLYGHAVGTFSATRHGIMWKSSVMGNDDIETKRVLPRESISGALWTVFGKSGHLRVLTKAPREGEQTKLPAAMRFDGFPGTDYEAMSEALRDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADEDGQEFEPRDGDEMMSLDLGEVSQCVLPGNNR-NEIEMQFLESDTVEAGTDQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKKPGAPRYDER-----MSDDEESDDSDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKARYKREMEDY 666          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A448Z7B6_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7B6_9STRA)

HSP 1 Score: 379 bits (972), Expect = 1.220e-117
Identity = 286/673 (42.50%), Postives = 398/673 (59.14%), Query Frame = 0
Query:    6 IGIQGHSLGSLQLSSEELVW---------TSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQ------NDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVA--PKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERP--------------KSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKY 626
            IG+ GHS+G+   +   + W         T    +S + V   ++  A W+ F +  HLRL ++      N    +R DGF  + Y  + D F +   I L K  +++ G  YG  ++    + F                  +   +  L++ +VSQCV+PG  + N+VELQF ESDA +   D LV++R  +P   E    D    S AE LQ  +++ ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD  E+ VN+  D L+++Y  +L   M G L NL+AK FK+++ K V++ GKFS+ +    VKCAL ANEG LYPL K F+FIHKP  +I F+E++SVEFQRY G QG+  TRNFDLCV+  P + +    + Y+FSG+DRS+Y  LY+FLSTKK+RIKN+++ G  G   Q   + + D      D +  +XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX                 KS +K     +      XXXX + K V        P  KK KKDPN PK  ++AFM FS+  R   +   P+L   +++K++G+++ ++  E  A    K  +DK RY+REM+ Y
Sbjct:   14 IGLHGHSVGTFACTDAGIQWKSSLYGREDTGGLSASTRNVPKDSIEKAGWSVFGKSGHLRLNMEPKEGSSNTQHEMRFDGFPVSAYETMKDIFQASYGIELLKLNMSSAGTQYGRSKISGKKLVFRHCVLEDADEEGEEFEVRDGDEMMSLDLTEVSQCVLPGNNR-NEVELQFPESDAVEANNDQLVSVRFFIPPDPEVDPSDKTIKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKIIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKPNAPSAGNQQEYVFSGVDRSDYAGLYNFLSTKKIRIKNLQEIG--GVQEQAVPVYNEDEIYGGPDHEMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEARGGSGSKSKRKSNXXXLIEDDLPXXXXGKKKVVET-----KPVSKKLKKDPNKPKQVTTAFMIFSNTNRERFRTENPDLNFGDLAKLIGKKYKELSKEELAELEKKVEKDKLRYEREMKNY 676          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: W7TS58_9STRA (FACT complex subunit SSRP1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS58_9STRA)

HSP 1 Score: 370 bits (949), Expect = 9.630e-116
Identity = 266/655 (40.61%), Postives = 377/655 (57.56%), Query Frame = 0
Query:    3 FPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKK-SNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKL------------RIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKK---------DPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSRTQEGA 634
            F  IG+ G S+G+L  + + L W     S+AK V+   +  A+W+ F ++ HLRLFL+N    +R DGF + +   V + F S   + L ++ +N+GG NYG+L   DN +  S E++ + +L +  VSQCV+PG     N+VELQF E+DA D+ EDTLV +R  +P  +E+ D    AE+ Q  V+ R  +    G  LV F E++G F +PRGRY I +Y++  R+HG++YD+K+ Y+DI   FLLE+PD R+ AFV+ L KPIRQGQQ+Y +LVL+T    +E+ VNM+ ++L++KY   L   M GP+H+L+AK FK+LS K VY + +F S    + VKC+L A+EG LYPL+K+F+FI+KPT  I F +I+SV F R GGA   GVTR FDL V  + + G+V + YIF+ I++ E+ +L  +L  K+             +I  + +   +G             YK    ++ G XXXXXXXXXX XXXXX                    E+             XXXXXXXXX        G   +   K+K            DPNAPK A SA+M F+ A R  VKA QP LK TEISKV+GERW  + AE +  + D+A   K RY  E+  YK++ +E A
Sbjct:    7 FENIGLSGQSVGTLTFTGKGLEWRGP--SNAKTVQAKDILRASWSVFGKWGHLRLFLKNG-KALRCDGFLRTEEERVREVFQSNYSLSLEREVLNSGGANYGDLIFEDNTLVMSLEDKPVLELPLGAVSQCVLPGTGNIKNEVELQFVETDAADRDEDTLVEVRFYIPPGEEEDD---GAEAFQKNVLARTTVQASTGDALVTFAEDEGFFLYPRGRYVINLYTNSFRLHGAKYDHKMAYDDIIHFFLLERPDHRW-AFVIGLKKPIRQGQQRYNYLVLQTHDGASEVTVNMTEEELREKYEDRLEQTMAGPMHHLVAKTFKILSGKKVYHSQRFQSARNVRWVKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVSFDRVGGA--VGVTRTFDLRVLLRPLDGDVRREYIFAQIEKEEHANLSQYLRDKQTIKVIDDKPVSQAKIDRMLEEEEEGGXXXXXXXXXXXSYKG---EESGSXXXXXXXXXXXXXXXXSSGAEMVEESDLEEMTGIKKEKXXXXXXXXXXXXXXXXXXXXXXXXXSDAGTGGKKRKGKKEKXXXXXXXXXXXXDPNAPKQALSAYMLFTQASREAVKAEQPGLKVTEISKVMGERWRALSAEEKKVFEDQAASAKVRYGEELRAYKAKKKEEA 649          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF8_ECTSI0.000e+078.70FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A6H5L083_9PHAE2.020e-20069.76FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
A0A836C825_9STRA1.340e-14747.58FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A7S2SJ65_9STRA5.200e-12545.92FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A7S4HR37_9STRA1.310e-12438.51Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7FQX7_9STRA4.110e-12145.24FACT complex subunit SSRP1 (Fragment) n=1 Tax=Frag... [more]
A0A7S0TAB4_9STRA2.620e-12044.14FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]
K0SUI2_THAOC7.290e-11838.86Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A448Z7B6_9STRA1.220e-11742.50FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]
W7TS58_9STRA9.630e-11640.61FACT complex subunit SSRP1 n=2 Tax=Monodopsidaceae... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 609..629
NoneNo IPR availableGENE3D2.30.29.150coord: 191..331
e-value: 4.2E-49
score: 167.8
NoneNo IPR availablePANTHERPTHR45849:SF1FACT COMPLEX SUBUNIT SSRP1coord: 9..617
NoneNo IPR availablePANTHERPTHR45849FAMILY NOT NAMEDcoord: 9..617
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 210..440
IPR000969Structure-specific recognition proteinPRINTSPR00887SSRCOGNITIONcoord: 258..274
score: 61.76
coord: 349..367
score: 55.26
coord: 213..229
score: 45.59
coord: 322..335
score: 39.29
coord: 235..251
score: 52.21
coord: 367..384
score: 54.86
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 558..628
e-value: 3.4E-21
score: 86.4
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 559..627
e-value: 2.0E-18
score: 66.6
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 559..627
score: 18.434
IPR013719Domain of unknown function DUF1747SMARTSM01287Rtt106_2coord: 341..441
e-value: 6.6E-32
score: 122.0
IPR013719Domain of unknown function DUF1747PFAMPF08512Rtt106coord: 343..440
e-value: 3.2E-22
score: 78.7
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 332..439
e-value: 7.6E-33
score: 114.6
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 3..86
e-value: 2.6E-5
score: 26.2
IPR024954SSRP1 domainPFAMPF03531SSrecogcoord: 99..169
e-value: 8.1E-17
score: 60.9
IPR035417FACT complex subunit POB3-like, N-terminal PH domainPFAMPF17292POB3_Ncoord: 10..85
e-value: 5.0E-11
score: 42.9
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 544..640
e-value: 2.2E-25
score: 90.8
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 549..630
IPR038167SSRP1 domain superfamilyGENE3D2.30.29.220coord: 88..176
e-value: 9.7E-7
score: 30.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2733contigH-paniculata_contig2733:4190..13765 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2733.7483.1mRNA_H-paniculata_contig2733.7483.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2733 4190..14220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2733.7483.1 ID=prot_H-paniculata_contig2733.7483.1|Name=mRNA_H-paniculata_contig2733.7483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=653bp
MNFPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFA
EYCHLRLFLQNDLPPVRLDGFSKAQYADVDKFLSKLDIRLSKDRINAGGG
NYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHES
DATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKV
LVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLE
KPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQK
YNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGA
NEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLC
VAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSM
LQLGDLDDHDPYKAALDDDQGDDDDESEEDADYAPDARESNAESSSDSGD
AGDDSDDSERPKSSKKKKEAAVPKKEAVAPKKQRAKAVSGGAPSKPPAKK
KQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKM
DAEARAPYTDKAYRDKERYKREMEKYKSRTQEGANGRRKGKADGSNASED
SS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000969SSrcognition
IPR009071HMG_box_dom
IPR013719DUF1747
IPR011993PH-like_dom_sf
IPR024954SSRP1_dom
IPR035417POB3_N
IPR036910HMG_box_dom_sf
IPR038167SSRP1_sf