mRNA_H-paniculata_contig2733.7483.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2733.7483.1
Unique NamemRNA_H-paniculata_contig2733.7483.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: D7FLF8_ECTSI (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF8_ECTSI)

HSP 1 Score: 892 bits (2304), Expect = 0.000e+0
Identity = 495/629 (78.70%), Postives = 539/629 (85.69%), Query Frame = 1
Query:    1 MNFPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLPPVRLDGFSKAQYADVDKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSR 1887
            MNF KIG+QG+SLG+LQL++EEL WTS DKSS+KKVKW  VSHATWAQ+A YCHLRLF++ D  PVRLDGFSKAQ+AD++KFLS+ D+ LS +  N GGGNYG++EVLDNIVRFSS N+TLFDLNIKDVSQCVMPGVKKSNDVELQ HESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNE+QGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMSA+DLQ+KY+ NLNSEM GPLHNLIAKIFKVLSNKPVYVTGKFSS +GAKAVKCALGANEG+LYPLNKSFIFIHKPTCIIGFDEI+SVEFQRYGGAQGAGVTRNFDLCVAPKSVAGE  KPY+FSGIDRSEY+SLYSFLSTKKLRIKNIK++GND +MLQLGDLDDHDPYKAALDDDQG+     XXXXX XXXXXXXXXXXXXXXXXXXXXX      K+SKK+               Q+                  KKD +APKGA SAFMQFS A RA+VK   PELK TEISKVLGE+WGK+D   + PY DKA  DK RYKRE + Y S+
Sbjct:    1 MNFSKIGVQGYSLGNLQLTAEELNWTSDDKSSSKKVKWLDVSHATWAQYAAYCHLRLFMKRDARPVRLDGFSKAQHADIEKFLSERDVSLSNESPNPGGGNYGDIEVLDNIVRFSSGNKTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEATITVNMSAEDLQKKYDSNLNSEMIGPLHNLIAKIFKVLSNKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNKSFIFIHKPTCIIGFDEIESVEFQRYGGAQGAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKESGNDNAMLQLGDLDDHDPYKAALDDDQGEDEESEXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRAH--KTSKKRPGTGS----AKKGPTQKXXXXXXXXXXXXXXXXXAKKDKDAPKGAMSAFMQFSQANRAQVKTDNPELKVTEISKVLGEKWGKLDETQKKPYQDKADEDKARYKRERDAYDSK 623          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A6H5L083_9PHAE (FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L083_9PHAE)

HSP 1 Score: 580 bits (1495), Expect = 3.280e-198
Identity = 346/496 (69.76%), Postives = 369/496 (74.40%), Query Frame = 1
Query:  355 RTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAK----IFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERP-----------------------KSSKKK------KEAAVPXXXXXXXXXQRA-----KAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAE 1728
            RTLFDLNIKDVSQCVMPGVKKSNDVELQ HESDATDQTEDTLVAIRVTLPEKDEDTDE SPAESLQMAV+ERANIHDVKGKVLVEFNE+QGTFDFPRGRYS+EMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFV+SLDKPIRQGQQKYQHLVLRTTKDEA I VNMSA+DLQ+KY+ NLNSEM GPLHNL+AK    IFKVLS+KPVYVTGKFSS +GAKAVKCALGANEG+LYPLNK                             GAGVTRNFDLCVAPKSVAGE  KPY+FSGIDRSEY+SLYSFLSTKKLRIKNIK+ GND +MLQLGDLDDHDPYKAALDDD+G+                    XXXXXXXXXXXXXXXX                          K+SKKK      K+ A                   +  SGG  SKP  KK+ KKD +APKGA SAFMQFS A RA+
Sbjct:    3 RTLFDLNIKDVSQCVMPGVKKSNDVELQLHESDATDQTEDTLVAIRVTLPEKDEDTDERSPAESLQMAVMERANIHDVKGKVLVEFNESQGTFDFPRGRYSVEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVISLDKPIRQGQQKYQHLVLRTTKDEAAITVNMSAEDLQKKYDSNLNSEMIGPLHNLVAKVPKLIFKVLSSKPVYVTGKFSSTNGAKAVKCALGANEGYLYPLNK-----------------------------GAGVTRNFDLCVAPKSVAGETPKPYVFSGIDRSEYSSLYSFLSTKKLRIKNIKERGNDNAMLQLGDLDDHDPYKAALDDDEGEDEESEDDADYAPDARGGSDAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDSDDGAHKTSKKKPGTGSAKKGATQKKVGCSPEPSSLNPCFPQRASGGHSSKPTPKKRTKKDKDAPKGAMSAFMQFSQANRAQ 469          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A836C825_9STRA (FACT complex subunit SSRP1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C825_9STRA)

HSP 1 Score: 451 bits (1159), Expect = 1.350e-145
Identity = 315/662 (47.58%), Postives = 393/662 (59.37%), Query Frame = 1
Query:    7 FPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDL-PPVRLDGFSKAQYADVDKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTD--------------EPSP---AESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAG-VTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQK-------------KDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSRTQE 1896
            F  IGIQGHS+GS++ S E ++W S+D+SS +KV W+    ATWA F +Y HLR+F+++   PPVR DGF +A +  + + L+   I+LS+D+                                                               D LV +R+ LP++ ED D              +  P   AE+   AV++RANI DVKG VL E + + GTF  PRGRY++EMYS F+RMHGS+YDYKIQY DI+KLFLLEKPD+RYVAFV+SLDKP+RQGQQ+YQHLVL+ +K E  + +NMS  +LQ+KY G L   M G L NLIAKIFK LS + V+VTG + S +GAK VKCA+GA+EGHLYPLNKSFIFIHKPT +IGFDE++SVEFQRY G Q    V R+FDLCV  +S++GE +K Y FSGIDRSEY SLY +  TK LRIKNIK +G+  +      +D  D  +      +G+              XXXXXXXXXXXXXXXXXXXXXX               XXXXXXXXX           SKP   K++              KDPNAPKGA SAFM FS   R +V   QP LK TE+SKVLGERW  M AE +  + DKA  DK RY  EM++YKS  Q+
Sbjct:    9 FKGIGIQGHSVGSVKFSDEGVMWASSDRSSQQKVLWSKAEKATWAVFGKYAHLRMFMKDPADPPVRFDGFQRADFDRLKEALAAHSIKLSRDK---------------------------------------------------------------DCLVEMRLYLPDESEDDDGMEVDEDGEAIRKKDKKPRFTAETFHQAVMDRANIRDVKGSVLCELDSSLGTFLTPRGRYALEMYSTFLRMHGSKYDYKIQYEDINKLFLLEKPDDRYVAFVISLDKPVRQGQQRYQHLVLQASKVEETLNLNMSEAELQEKYKGALEPVMRGALCNLIAKIFKSLSGRAVFVTGNYRSAAGAKCVKCAMGASEGHLYPLNKSFIFIHKPTRVIGFDEVESVEFQRYSGTQDPSTVRRSFDLCVTLRSISGEPSKDYTFSGIDRSEYPSLYQWCQTKNLRIKNIKSSGDKVASALAEAMDSADVRE------EGEIKRVKSSEPEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSKPEGGKRKAPAXXXXXXXXXXXKDPNAPKGAKSAFMYFSMETRGDVLKDQPGLKITEVSKVLGERWRGMTAEDKKQFEDKAAADKARYGTEMQEYKSAQQQ 601          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A7S2SJ65_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SJ65_9STRA)

HSP 1 Score: 391 bits (1004), Expect = 3.770e-123
Identity = 214/466 (45.92%), Postives = 297/466 (63.73%), Query Frame = 1
Query:   16 IGIQGHSLGSLQLSSEELVWTSA------DKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLPPVRLDGFSKAQYADVDKFLSKL-DIRLSKDRINAGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQN 1332
            IG+ GHS+G+    ++ + W SA      D  +++ +    V  A W  F    HLR+   N     R DGF  + +  V   +++  D+  +K  ++  G ++G  E+ D  + F                  E   +  + + +VSQCV+PG  + N++ELQFHESD  +   D LVAIR  +P   E    D D P+ AE     +++ A I +  G V+VEF+EN+GTF  PRGRY IE+Y  F+RM G++YDYKI+Y+DI++LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ LVL+TTK+ +E+ VN+   +L+++Y G L   M G L NLIAK FK+++ K V++ GKF +      VKCAL ANEGHLYPL KSF+FIHKP  +I FDE+DSVEFQRY G QG+  TRNFDLCV   S AG+  K YIFSGIDRS+YTSLY+FLS KK++IKNI+++
Sbjct:   15 IGLHGHSVGTFMADAQGIKWKSALLTDDDDVVTSRSISKKHVIGARWTIFGRSGHLRIQTPNT--EFRFDGFPYSDFDKVRDIMNEYYDVETNKLPMSTAGNSFGLTEIEDRNLAFKQCILEDADEEGEEFEPREGDEMMSMKLAEVSQCVLPGNNR-NEIELQFHESDTVEAGTDQLVAIRFYIPPDPEMDPSDRDAPTSAEVFHQRIMKNAKIKNTAGDVIVEFDENKGTFLTPRGRYLIELYDSFLRMRGNKYDYKIKYDDIARLFLLPKPDDTHMAFVIALDKPIRQGQQRYQMLVLQTTKENSEVTVNLDEKELEEEYKGELQPVMQGALCNLIAKTFKIIAKKKVFIPGKFVNAYQQSCVKCALKANEGHLYPLEKSFVFIHKPPVLIRFDEVDSVEFQRYAGGQGS--TRNFDLCVMLASSAGDPQKEYIFSGIDRSDYTSLYNFLSGKKIKIKNIQES 475          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A7S4HR37_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HR37_9STRA)

HSP 1 Score: 400 bits (1028), Expect = 1.010e-122
Identity = 258/670 (38.51%), Postives = 369/670 (55.07%), Query Frame = 1
Query:   16 IGIQGHSLGSLQLSSEELVWTSA--------DKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLP---PVRLDGFSKAQYADVDKFLSKL-DIRLSKDRINAGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLP-EKDEDTDE---PSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGND---------------GSMLQLGDLDD--HDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKY 1878
            IG+ GHS+G+     + L W SA        D SS++ +   T+  A W  F    H+R+  +   P    +R DGF  A +  +   L +L D+ L+K  +++ G ++G  ++ D  + F                  +   +   N+K++SQCV+PG  + N++E+QFHESDA +   D LVAIR  +P + D D  E    +PAE  Q  +++ ANI    G V+VE  E +GTF  PRGRY+IE+Y  F+RM G++YDYKI+Y+DIS+LFLL KPDE ++AFV++LDKPIRQGQQ+YQ+LV++TTKD AE+ VN+  + L+++YNG+L   M G L NL+AK FK+++ K V++ GKF++ +    VKCAL A+EGHLYPL K FIFIHKPT ++ FD+++SVEFQRY G QG+  TRNFDLCV+  +     TK YIFSGIDRS+YT LY+FLS KK++IKN++ N  D               G     G++++   D      D++  +                                     + KS+K       P      XXX            K   KKK   DP APK   SA+  F +A R ++K   P+    E+S + G+ W K+  E +  Y   A  D  R+KREM  Y
Sbjct:   10 IGLHGHSVGTFTADPDGLRWKSAVMGGGDNDDISSSRVLPAKTLVAAKWTVFGRSGHVRVRSKASDPVNAELRFDGFPAADFDRLRDVLKRLFDVDLTKHAMSSAGTSFGLTDIEDGNMVFRQCILEDADEEGEEFEPRDGDEMMSANLKEISQCVLPGNNR-NEIEMQFHESDAVEAGTDQLVAIRFYIPPDPDADPSELDASTPAELFQQRIMKNANIKRTTGDVIVEIPEAKGTFLTPRGRYAIELYDTFLRMRGAKYDYKIKYDDISRLFLLPKPDEVHMAFVIALDKPIRQGQQRYQNLVMQTTKDHAELTVNLDEEVLEKEYNGDLQPVMYGALSNLVAKTFKIIAKKKVFIPGKFANANQQPCVKCALRASEGHLYPLEKQFIFIHKPTVLVRFDDVESVEFQRYAGGQGS--TRNFDLCVSLINSGDSSTKEYIFSGIDRSDYTGLYNFLSGKKIKIKNLQGNILDDAPSAPPVYNEDVIYGVPAGAGEMEESSEDESYGTNDEESVESESISGDDDDLGSGFDDSDLEEHRKAAKKSKPEDAKGKEKSNKXXXXXXXPEKEGSSXXXXXXXXXXXXXXDKVAPKKKXXXDPKAPKKGKSAYNYFLTAMRPKIKEQNPDATFGELSTLAGQAWKKVSNEEKEKYEKMAESDAARFKREMADY 676          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A1E7FQX7_9STRA (FACT complex subunit SSRP1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FQX7_9STRA)

HSP 1 Score: 385 bits (990), Expect = 1.450e-119
Identity = 285/630 (45.24%), Postives = 386/630 (61.27%), Query Frame = 1
Query:  100 KKVKWATVSHATWAQFAEYCHLRLFL-----QNDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSS---ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVT--KPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDP-YKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSRTQEGANGRRKGKADG 1932
            K +    +  A W  F +  HLR+ +     +N    +R DGF  A + D+ D F    DI +SK  I++ G  YG+ ++    + F     E RT   +  L++ +VSQCV+PG  + N+VELQF ESDA +   D LV++R+ +P   E    D    + AE LQ  +++ ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD  E+ VN+  D L+++Y  +L   M G L NL+AK FKV++ K V++ GKFS+ +    VKCAL ANEG LYPL K FIFIHKP  +I F+E++SVEFQRY G QG+  TRNFDLCV  K+ A  ++  + Y+FSGIDRS+YT LY+FLSTK +RIKN+++    G++ Q+  + + D  Y    DD +  XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX             V                    PS   +KKK KKDPN PK A SA+M +S+  R  VK   P  K  +++K++   + K+  +  A    +  ++KERY REM+ Y      G +G  KG   G
Sbjct:    1 KNIPKGNIEKAGWTVFGKSGHLRIGVIVKEGKNGPSELRFDGFPVASFDDLKDFFQENYDIEVSKHNISSAGTQYGQSKISGKKLLFQHCEFEVRTGDEMMSLDLGEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSVRLYIPPDPEVDPSDKTAKTSAELLQHRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFIFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVTLKASAASISNQQEYVFSGIDRSDYTGLYNFLSTKSIRIKNLQEIS--GAVEQVAPVYNEDEIYGGPADDMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKV-----------------ADIPSPTISKKKAKKDPNKPKQALSAYMVYSNLNRERVKKENPSAKFGDMAKLIAADYKKLSGDELADVEKRVIKEKERYAREMKDYIPSAGFGEDGVEKGATSG 608          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A7S0TAB4_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0TAB4_9STRA)

HSP 1 Score: 385 bits (990), Expect = 1.840e-118
Identity = 294/666 (44.14%), Postives = 394/666 (59.16%), Query Frame = 1
Query:   16 IGIQGHSLGSLQLSSEELVWTSA-------DKSSAKKVKWATVSHATWAQFAEYCHLRLFLQ------NDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSS-------------ENRT---LFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVT--KPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQ-NGNDGSMLQLGDLD------DHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERP-KSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYK 1881
            IG+ GHS+G+       + W SA          + + +  + +  A W  F +  HLRL +       N    +R DGF  A + ++ D F     I +SK  I++ G  YG+ ++L   + F               E RT   +  L++ +VSQCV+PG  + N+VELQF ESDA +   D LV+IR  +P   E    D    S AE LQ  +++ ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD  EI VN+  D L+++Y  +L   M G L NL+AK FKV++ K V++ GKFS+ +    VKCAL ANEG LYPL K F+FIHKP  +I F+E++SVEFQRY G QG+  TRNFDLCV+ K+ A  V+  + Y+FSG+DRS+YT LY+FLSTK +RIKN+++  G       + D D      DH+  + + D+   +   XXXXXXX XXXXXXXXXXXXXXXXXXXX      R  K           XXXXXXXXX                    KKDPN PK A SAFM FS+A RA VK   P+ K  E++K+L   +  +  +  A    K  ++K+RY+REME YK
Sbjct:   10 IGLHGHSVGTFACGEAGVQWKSALYGRDDTGSGTTRNIPKSLIERAAWTVFGKSGHLRLKVAQQEGKANLHHEMRFDGFPVAAFDNLKDVFQDTYGIEVSKHNISSAGTQYGQSKILGKKLVFQHCILEDADEEGEEFEVRTGDEMMSLDLAEVSQCVLPGNNR-NEVELQFPESDAIEANNDQLVSIRFYIPPDPEVDPSDRTVKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEIRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKVIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKASAASVSNQQEYVFSGVDRSDYTGLYNFLSTKNIRIKNLQEIAGVQEKAAPVYDEDEIYGGPDHEMLEESEDESYDEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDLEEARGGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGSXXXXXXAKKDPNKPKRAQSAFMIFSNANRARVKEENPDAKFGEMAKLLSAEYKNLSKDELAELDKKVEKEKKRYEREMENYK 672          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: K0SUI2_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SUI2_THAOC)

HSP 1 Score: 380 bits (976), Expect = 4.930e-116
Identity = 258/664 (38.86%), Postives = 376/664 (56.63%), Query Frame = 1
Query:   16 IGIQGHSLGSLQLSSEELVWTSA-----DKSSAKKVKWATVSHATWAQFAEYCHLRLFL-------QNDLPP-VRLDGFSKAQYADVDKFLSKL-DIRLSKDRINAGGGNYGELEVLDNIVRFSSENRT----------------LFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEV--TKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPS-------KPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKY 1878
            IG+ GH++G+   +   ++W S+     D  + + +   ++S A W  F +  HLR+         Q  LP  +R DGF    Y  + + L  L  + L +  +++ G ++G  ++ +  + F   N                  +  L++ +VSQCV+PG  + N++E+QF ESD  +   D LVA+R  +P   +    D D P+ AE+LQ  +++ A++    G ++ EF+E +GTF  PRGRYSIE+Y  F+R+ G++YDYKI+Y+DIS+LFLL + D+  VAFV++LDKPIRQGQQ+Y  LV++ TK+ +E+ +N+    L+++Y G +   M G   NL+AK FKV++ K V++ GKF++++    VKCAL ANEGHLYPL K FIFIHKP  +I FDEI+SVEFQRY G QG+  TRNFDLCV+  S  G+   TK Y FSGID+S Y +LYSFLS KK++IKN++  G +         D+        DD++ D              XXXXXXXX               R K           XXXXXXXXX                   +P       +DPNAPK   SA++ F+SAKR+E+K A P+    +ISK+LG+ + ++    + PY + A +DK RYKREME Y
Sbjct:   11 IGLYGHAVGTFSATRHGIMWKSSVMGNDDIETKRVLPRESISGALWTVFGKSGHLRVLTKAPREGEQTKLPAAMRFDGFPGTDYEAMSEALRDLFGVTLKRHSMSSAGSSWGNTDISNKHLVFRQCNLEDADEDGQEFEPRDGDEMMSLDLGEVSQCVLPGNNR-NEIEMQFLESDTVEAGTDQLVALRFYVPPDADADPTDKDAPTSAEALQSRIMQIASVKKTSGSIIAEFDEGKGTFLTPRGRYSIELYDSFLRLRGAKYDYKIKYDDISRLFLLPRQDDMTVAFVIALDKPIRQGQQRYNMLVMQCTKEHSELNINLDEATLEKEYGGQIEQHMNGSFSNLVAKTFKVITRKKVFIPGKFANSNQQACVKCALRANEGHLYPLEKQFIFIHKPAVLIRFDEIESVEFQRYAGGQGS--TRNFDLCVSLHSTPGDSASTKEYTFSGIDKSNYAALYSFLSGKKIKIKNLEGVGEEPKKPGAPRYDER-----MSDDEESDDSDFDENAPKSDDSXXXXXXXXDLGSVVSDDSDLAEHRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSXXXXXXRDPNAPKAPKSAYVFFTSAKRSEIKEANPDAGFGDISKLLGKAYKELSDAEKEPYDEMARKDKARYKREMEDY 666          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: A0A448Z7B6_9STRA (FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7B6_9STRA)

HSP 1 Score: 379 bits (972), Expect = 8.190e-116
Identity = 286/673 (42.50%), Postives = 398/673 (59.14%), Query Frame = 1
Query:   16 IGIQGHSLGSLQLSSEELVW---------TSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQ------NDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSS----------------ENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHESDATDQTEDTLVAIRVTLPEKDE----DTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVA--PKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERP--------------KSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKY 1878
            IG+ GHS+G+   +   + W         T    +S + V   ++  A W+ F +  HLRL ++      N    +R DGF  + Y  + D F +   I L K  +++ G  YG  ++    + F                  +   +  L++ +VSQCV+PG  + N+VELQF ESDA +   D LV++R  +P   E    D    S AE LQ  +++ ANI    G V+VEF+  +G+F  PRGRYSIE+Y  F RM G +YDYKI+Y+DIS+LFLL KPD+ ++AFV++LDKPIRQGQQ+YQ+LVL+T KD  E+ VN+  D L+++Y  +L   M G L NL+AK FK+++ K V++ GKFS+ +    VKCAL ANEG LYPL K F+FIHKP  +I F+E++SVEFQRY G QG+  TRNFDLCV+  P + +    + Y+FSG+DRS+Y  LY+FLSTKK+RIKN+++ G  G   Q   + + D      D +  +XXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXX                 KS +K     +      XXXX + K V        P  KK KKDPN PK  ++AFM FS+  R   +   P+L   +++K++G+++ ++  E  A    K  +DK RY+REM+ Y
Sbjct:   14 IGLHGHSVGTFACTDAGIQWKSSLYGREDTGGLSASTRNVPKDSIEKAGWSVFGKSGHLRLNMEPKEGSSNTQHEMRFDGFPVSAYETMKDIFQASYGIELLKLNMSSAGTQYGRSKISGKKLVFRHCVLEDADEEGEEFEVRDGDEMMSLDLTEVSQCVLPGNNR-NEVELQFPESDAVEANNDQLVSVRFFIPPDPEVDPSDKTIKSSAELLQQRIMQMANIRKTTGDVIVEFDLEKGSFLTPRGRYSIELYERFFRMRGQKYDYKIKYDDISRLFLLPKPDDVHMAFVIALDKPIRQGQQRYQYLVLQTNKDPDEVRVNLDEDTLKKEYGDDLQPIMRGSLSNLVAKTFKIIAKKKVFIPGKFSNANQQPCVKCALRANEGLLYPLEKQFVFIHKPPVLIRFNEVESVEFQRYAGGQGS--TRNFDLCVSLKPNAPSAGNQQEYVFSGVDRSDYAGLYNFLSTKKIRIKNLQEIG--GVQEQAVPVYNEDEIYGGPDHEMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEARGGSGSKSKRKSNXXXLIEDDLPXXXXGKKKVVET-----KPVSKKLKKDPNKPKQVTTAFMIFSNTNRERFRTENPDLNFGDLAKLIGKKYKELSKEELAELEKKVEKDKLRYEREMKNY 676          
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Match: W7TS58_9STRA (FACT complex subunit SSRP1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TS58_9STRA)

HSP 1 Score: 370 bits (949), Expect = 6.070e-114
Identity = 266/655 (40.61%), Postives = 377/655 (57.56%), Query Frame = 1
Query:    7 FPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFAEYCHLRLFLQNDLPPVRLDGFSKAQYADV-DKFLSKLDIRLSKDRINAGGGNYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKK-SNDVELQFHESDATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKVLVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLEKPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQKYNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGANEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLCVAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKL------------RIKNIKQNGNDGSMLQLGDLDDHDPYKAALDDDQGDXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXERPKSSKKKKEAAVPXXXXXXXXXQRAKAVSGGAPSKPPAKKKQKK---------DPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKMDAEARAPYTDKAYRDKERYKREMEKYKSRTQEGA 1902
            F  IG+ G S+G+L  + + L W     S+AK V+   +  A+W+ F ++ HLRLFL+N    +R DGF + +   V + F S   + L ++ +N+GG NYG+L   DN +  S E++ + +L +  VSQCV+PG     N+VELQF E+DA D+ EDTLV +R  +P  +E+ D    AE+ Q  V+ R  +    G  LV F E++G F +PRGRY I +Y++  R+HG++YD+K+ Y+DI   FLLE+PD R+ AFV+ L KPIRQGQQ+Y +LVL+T    +E+ VNM+ ++L++KY   L   M GP+H+L+AK FK+LS K VY + +F S    + VKC+L A+EG LYPL+K+F+FI+KPT  I F +I+SV F R GGA   GVTR FDL V  + + G+V + YIF+ I++ E+ +L  +L  K+             +I  + +   +G             YK    ++ G XXXXXXXXXX XXXXX                    E+             XXXXXXXXX        G   +   K+K            DPNAPK A SA+M F+ A R  VKA QP LK TEISKV+GERW  + AE +  + D+A   K RY  E+  YK++ +E A
Sbjct:    7 FENIGLSGQSVGTLTFTGKGLEWRGP--SNAKTVQAKDILRASWSVFGKWGHLRLFLKNG-KALRCDGFLRTEEERVREVFQSNYSLSLEREVLNSGGANYGDLIFEDNTLVMSLEDKPVLELPLGAVSQCVLPGTGNIKNEVELQFVETDAADRDEDTLVEVRFYIPPGEEEDD---GAEAFQKNVLARTTVQASTGDALVTFAEDEGFFLYPRGRYVINLYTNSFRLHGAKYDHKMAYDDIIHFFLLERPDHRW-AFVIGLKKPIRQGQQRYNYLVLQTHDGASEVTVNMTEEELREKYEDRLEQTMAGPMHHLVAKTFKILSGKKVYHSQRFQSARNVRWVKCSLKASEGLLYPLDKAFMFIYKPTLYIPFKDIESVSFDRVGGA--VGVTRTFDLRVLLRPLDGDVRREYIFAQIEKEEHANLSQYLRDKQTIKVIDDKPVSQAKIDRMLEEEEEGGXXXXXXXXXXXSYKG---EESGSXXXXXXXXXXXXXXXXSSGAEMVEESDLEEMTGIKKEKXXXXXXXXXXXXXXXXXXXXXXXXXSDAGTGGKKRKGKKEKXXXXXXXXXXXXDPNAPKQALSAYMLFTQASREAVKAEQPGLKVTEISKVMGERWRALSAEEKKVFEDQAASAKVRYGEELRAYKAKKKEEA 649          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2733.7483.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLF8_ECTSI0.000e+078.70FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sili... [more]
A0A6H5L083_9PHAE3.280e-19869.76FACT complex subunit SSRP1 n=1 Tax=Ectocarpus sp. ... [more]
A0A836C825_9STRA1.350e-14547.58FACT complex subunit SSRP1 n=1 Tax=Tribonema minus... [more]
A0A7S2SJ65_9STRA3.770e-12345.92FACT complex subunit SSRP1 (Fragment) n=1 Tax=Euca... [more]
A0A7S4HR37_9STRA1.010e-12238.51Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A1E7FQX7_9STRA1.450e-11945.24FACT complex subunit SSRP1 (Fragment) n=1 Tax=Frag... [more]
A0A7S0TAB4_9STRA1.840e-11844.14FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]
K0SUI2_THAOC4.930e-11638.86Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A448Z7B6_9STRA8.190e-11642.50FACT complex subunit SSRP1 n=1 Tax=Pseudo-nitzschi... [more]
W7TS58_9STRA6.070e-11440.61FACT complex subunit SSRP1 n=2 Tax=Monodopsidaceae... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2733contigH-paniculata_contig2733:4190..14220 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score904.0
Seed ortholog evalue3.9e-260
Seed eggNOG ortholog2880.D7FLF8
Preferred namePOB3
KEGG koko:K09272
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000228,GO:0000741,GO:0000785,GO:0000790,GO:0000791,GO:0001672,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005719,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006338,GO:0006342,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0006997,GO:0007154,GO:0007275,GO:0008023,GO:0008104,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009267,GO:0009553,GO:0009559,GO:0009561,GO:0009605,GO:0009607,GO:0009791,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0009991,GO:0010197,GO:0010228,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016458,GO:0019219,GO:0019222,GO:0022414,GO:0022607,GO:0030154,GO:0030447,GO:0030466,GO:0030702,GO:0031298,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031334,GO:0031497,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033043,GO:0033044,GO:0033554,GO:0034613,GO:0034622,GO:0034641,GO:0034645,GO:0034724,GO:0034728,GO:0035101,GO:0036170,GO:0036180,GO:0040007,GO:0040029,GO:0042393,GO:0042594,GO:0042802,GO:0042803,GO:0043044,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043486,GO:0043596,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044182,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045893,GO:0045898,GO:0045899,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046983,GO:0048229,GO:0048284,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048608,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051641,GO:0051716,GO:0060255,GO:0060260,GO:0060261,GO:0061458,GO:0065003,GO:0065004,GO:0065007,GO:0070013,GO:0070727,GO:0071103,GO:0071496,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0140110,GO:1901360,GO:1901363,GO:1901576,GO:1902275,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990141,GO:2000112,GO:2000113,GO:2000142,GO:2000144,GO:2001141
EggNOG free text desc.DNA replication
EggNOG OGsCOG5165@1,KOG0526@2759
Ec32 ortholog descriptionHigh mobility group domain protein
Ec32 orthologEc-12_008000.1
COG Functional cat.BKL
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons15
Model size2414
Cds size1959
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2733.7483.1prot_H-paniculata_contig2733.7483.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2733 4190..13765 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929824.464606-CDS-H-paniculata_contig2733:4189..42841622929824.464606-CDS-H-paniculata_contig2733:4189..4284Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 4190..4284 +
1691481027.6300802-CDS-H-paniculata_contig2733:4189..42841691481027.6300802-CDS-H-paniculata_contig2733:4189..4284Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 4190..4284 +
1622929824.4817398-CDS-H-paniculata_contig2733:4477..46141622929824.4817398-CDS-H-paniculata_contig2733:4477..4614Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 4478..4614 +
1691481027.6449661-CDS-H-paniculata_contig2733:4477..46141691481027.6449661-CDS-H-paniculata_contig2733:4477..4614Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 4478..4614 +
1622929824.493487-CDS-H-paniculata_contig2733:5927..60511622929824.493487-CDS-H-paniculata_contig2733:5927..6051Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 5928..6051 +
1691481027.653819-CDS-H-paniculata_contig2733:5927..60511691481027.653819-CDS-H-paniculata_contig2733:5927..6051Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 5928..6051 +
1622929824.5106468-CDS-H-paniculata_contig2733:6319..64341622929824.5106468-CDS-H-paniculata_contig2733:6319..6434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 6320..6434 +
1691481027.6628504-CDS-H-paniculata_contig2733:6319..64341691481027.6628504-CDS-H-paniculata_contig2733:6319..6434Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 6320..6434 +
1622929824.5242627-CDS-H-paniculata_contig2733:7561..76481622929824.5242627-CDS-H-paniculata_contig2733:7561..7648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 7562..7648 +
1691481027.6721156-CDS-H-paniculata_contig2733:7561..76481691481027.6721156-CDS-H-paniculata_contig2733:7561..7648Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 7562..7648 +
1622929824.5357027-CDS-H-paniculata_contig2733:8145..82851622929824.5357027-CDS-H-paniculata_contig2733:8145..8285Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 8146..8285 +
1691481027.6811328-CDS-H-paniculata_contig2733:8145..82851691481027.6811328-CDS-H-paniculata_contig2733:8145..8285Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 8146..8285 +
1622929824.5503042-CDS-H-paniculata_contig2733:8664..88151622929824.5503042-CDS-H-paniculata_contig2733:8664..8815Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 8665..8815 +
1691481027.6911192-CDS-H-paniculata_contig2733:8664..88151691481027.6911192-CDS-H-paniculata_contig2733:8664..8815Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 8665..8815 +
1622929824.5654902-CDS-H-paniculata_contig2733:10344..104521622929824.5654902-CDS-H-paniculata_contig2733:10344..10452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 10345..10452 +
1691481027.7057774-CDS-H-paniculata_contig2733:10344..104521691481027.7057774-CDS-H-paniculata_contig2733:10344..10452Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 10345..10452 +
1622929824.5770044-CDS-H-paniculata_contig2733:11087..112101622929824.5770044-CDS-H-paniculata_contig2733:11087..11210Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 11088..11210 +
1691481027.721469-CDS-H-paniculata_contig2733:11087..112101691481027.721469-CDS-H-paniculata_contig2733:11087..11210Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 11088..11210 +
1622929824.588447-CDS-H-paniculata_contig2733:11381..114681622929824.588447-CDS-H-paniculata_contig2733:11381..11468Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 11382..11468 +
1691481027.7326796-CDS-H-paniculata_contig2733:11381..114681691481027.7326796-CDS-H-paniculata_contig2733:11381..11468Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 11382..11468 +
1622929824.6002412-CDS-H-paniculata_contig2733:11839..120821622929824.6002412-CDS-H-paniculata_contig2733:11839..12082Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 11840..12082 +
1691481027.7418983-CDS-H-paniculata_contig2733:11839..120821691481027.7418983-CDS-H-paniculata_contig2733:11839..12082Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 11840..12082 +
1622929824.613198-CDS-H-paniculata_contig2733:12239..124281622929824.613198-CDS-H-paniculata_contig2733:12239..12428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 12240..12428 +
1691481027.754222-CDS-H-paniculata_contig2733:12239..124281691481027.754222-CDS-H-paniculata_contig2733:12239..12428Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 12240..12428 +
1622929824.6264827-CDS-H-paniculata_contig2733:12576..127051622929824.6264827-CDS-H-paniculata_contig2733:12576..12705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 12577..12705 +
1691481027.7627785-CDS-H-paniculata_contig2733:12576..127051691481027.7627785-CDS-H-paniculata_contig2733:12576..12705Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 12577..12705 +
1622929824.6439147-CDS-H-paniculata_contig2733:13038..131631622929824.6439147-CDS-H-paniculata_contig2733:13038..13163Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 13039..13163 +
1691481027.7726817-CDS-H-paniculata_contig2733:13038..131631691481027.7726817-CDS-H-paniculata_contig2733:13038..13163Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 13039..13163 +
1622929824.7144628-CDS-H-paniculata_contig2733:13659..137651622929824.7144628-CDS-H-paniculata_contig2733:13659..13765Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 13660..13765 +
1691481027.784006-CDS-H-paniculata_contig2733:13659..137651691481027.784006-CDS-H-paniculata_contig2733:13659..13765Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2733 13660..13765 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929824.739897-UTR-H-paniculata_contig2733:13765..142201622929824.739897-UTR-H-paniculata_contig2733:13765..14220Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2733 13766..14220 +
1691481027.7983472-UTR-H-paniculata_contig2733:13765..142201691481027.7983472-UTR-H-paniculata_contig2733:13765..14220Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2733 13766..14220 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2733.7483.1

>prot_H-paniculata_contig2733.7483.1 ID=prot_H-paniculata_contig2733.7483.1|Name=mRNA_H-paniculata_contig2733.7483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=653bp
MNFPKIGIQGHSLGSLQLSSEELVWTSADKSSAKKVKWATVSHATWAQFA
EYCHLRLFLQNDLPPVRLDGFSKAQYADVDKFLSKLDIRLSKDRINAGGG
NYGELEVLDNIVRFSSENRTLFDLNIKDVSQCVMPGVKKSNDVELQFHES
DATDQTEDTLVAIRVTLPEKDEDTDEPSPAESLQMAVIERANIHDVKGKV
LVEFNENQGTFDFPRGRYSIEMYSHFMRMHGSRYDYKIQYNDISKLFLLE
KPDERYVAFVVSLDKPIRQGQQKYQHLVLRTTKDEAEIAVNMSADDLQQK
YNGNLNSEMTGPLHNLIAKIFKVLSNKPVYVTGKFSSNSGAKAVKCALGA
NEGHLYPLNKSFIFIHKPTCIIGFDEIDSVEFQRYGGAQGAGVTRNFDLC
VAPKSVAGEVTKPYIFSGIDRSEYTSLYSFLSTKKLRIKNIKQNGNDGSM
LQLGDLDDHDPYKAALDDDQGDDDDESEEDADYAPDARESNAESSSDSGD
AGDDSDDSERPKSSKKKKEAAVPKKEAVAPKKQRAKAVSGGAPSKPPAKK
KQKKDPNAPKGASSAFMQFSSAKRAEVKAAQPELKTTEISKVLGERWGKM
DAEARAPYTDKAYRDKERYKREMEKYKSRTQEGANGRRKGKADGSNASED
SS*
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mRNA from alignment at H-paniculata_contig2733:4190..14220+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2733.7483.1 ID=mRNA_H-paniculata_contig2733.7483.1|Name=mRNA_H-paniculata_contig2733.7483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10031bp|location=Sequence derived from alignment at H-paniculata_contig2733:4190..14220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACTTCCCGAAGATTGGAATCCAAGGACATAGCCTTGGATCCCTACA ACTCAGTTCGGAAGAGCTCGTGTGGACGTCCGCAGACAAGTCGAGGTAGG TGATTAATTGTACGGCAATGTCAGCGGCACCTCTATCCACGTACTAAAAT AGCGAATGTCGGCTCTCAGCAACTTGTCGTGAACCCTTCCACGGTGGTTT ACATGGCACCCCCCGTGATAACTTGATACACCTTTTCCTTGTAATATGCA ATATATAGCCCGTTTCTCCTTTTGTCTTCGTTCGTCAGCGCCAAGAAGGT GAAATGGGCAACTGTTTCTCATGCAACGTGGGCCCAGTTTGCAGAGTACT GTCACCTCCGACTATTCCTGCAAAACGACCTTCCTCCTGTTCGGCTCGAC GGCTTCAGCAAAGCGCAGTATGCAGGTGAAGGATATTTTGGATACTTCGC ACCTTGTTCCCTGTGTCTGAGTGGAAGGGAAGCACGTGCTTAGTCATGAT TAGCTACTTTCAGTTGGTGGCTTGCCATTTTACTCCGATTGGCAGTACTG ATTCGTGATCTTGGTTATCCTCCATCCTATTGAACATAATACATAAGGCA ATAGTCAGCGAGGAGAACACACTGAACTTCCTTTTTCCAGACCTTTCGCC TGCCCATTTCGACGTTTGAAATATATGCAAAGGGGATCTGTTGGTGTCCA AATCAATTAGCCGTTGATTCTCTTTCCCCCTGATTCGCCTCTGCGATTGC TGCTACAGTAAAGATTCCGAATGTGTCGCGATCAAAGGGGTAACTGCTGG GCGTCGGTCCCGATCCCATGTTTATTTTGGCCGCTTTCTTGTGGAACTGA ATAATATGGTTACATCCAAAGTGGCATTTCCCTTAGTACTTTTTCTCCCC TCTTTTCTAGGGTCCAGACACAAGACATCAATGTACAACTTTGCTGTCGC TAGCTCGACAGTGTGGATTATATGTATCATCTATCGATTGCCACAAACCA CGTTGACGCCCCGCAGTTGATACCGACCCATGAGCTGGCTTGTCTCTACC AAGTGGATAACTAACCTACTCCAGTTCTCGATCTGAGAGTCGAATTCTTG TGGGTCATGTAATGTTTCGACTGTTTTACACGCGAATCGGGACAGAAGCG GCTTGAAAAAAGGCACAAAAGTCCACTTCGCGTCGAAACACATGAATTTT GTAGATGGAATTTTCCGGCACAAATCCACAACCGCTACAGGCTTCCTCGA CTCTTGCCACAAACTGCAAGTGTTGGAAAGAATTTCATCAACTCTTTCTC GTCTTCGTCCTTGTTCGACGATGATATCACTGTTATGTGGGACACAACCA TACTTTTTGTAAGTAGAGATATGACCTAGTGTACTTGAATCCTGTGTACT TGTTAGAGAGTTGCGAGCGCTCGAGTCCCTCTCACAATCATGGTGAAGTT TTTCAGGGATATTGATCGCATTTGGGCTTTGCTTGTTTTTCGACGAAATA CCTTATTACTGCTCCAAAACGTAGGCATTACTACGACGTCACCCCTTATG CTTGTTGGGTGATGACGTAGTTCATTCCGCCGACAGTGTGGATGAAAGTC GCGGGTATAGTATGACACCGTCCTGGTGCAACCATTTTCCCCTTCGTTCT CTCACAGGTTGGATTGTTTCGACAGCTTGCTATTGCTTCCCCGTGTTGTG CATCCTGTTATACTTTTCGTGCCTGTAACTCCCCAAAGACGTCGATAAAT TTTTGTCCAAGCTCGACATCCGTCTATCGAAGGACCGGATAAATGCTGGA GGAGGAAATTATGGCGAGCTAGAGGTGCTCGACAACATCGTGCGCTTCAG TTCGGAAAATAGGTGAGATGACAAGACACATGAGACATGTAGCACTCGGA CTGTACGGCCGCTGTTTTTACAGTGCCATGTATTCACACACAAAATGCAG TGATTGCGTGGCGATCTTGTGTAAACAATCCAAGTAGCGTTGCTTGAACA CATGGGCGAAGACTGTTGGGCACGTTCATCCCGCCCGCATTAGATATTCG CGCCAGGTAGGTCATATACTGCACTCTGCACGATTGTCTGGGGATGATTT GATGCATACATTGCACAACTGCAAACGCAGGACCCTGTTTGACCTCAACA TCAAGGACGTCAGCCAGTGCGTTATGCCAGGGGTGAAGAAGAGCAACGAC GTAGAATTGCAATTCCACGAGAGCGATGCGACGGACCAAACGGAGGTGAA TGTAGACAAGTGTGGTTGTGTACCGCAATACCGTTTGTTATCGTCCCGGG TGCAAAGTGAAGAAAAAACTCGGCCAAGACAGATCGCATGGTGCGATACC AACGTTGGGGGTGCGAAAAGCGAAGAAGTCGTGATCGATGCTGGGGTTCA GGAAAGGTGTGAATGGTAGTGGATATAGTGCTGACAGAAAGTTCCCCCAT CTGTGCATTCGTAGGTTACAGCAGTACGTGCAGCCTGTTCAGCATGACAC ACAAAATAGTGCCGAGGAGAGTCGTCCTTACTCCTTTGAAGAATACTGTT CTCGCAATAATGCACCGCATATCTGCATTCTACTGCAAGAGAAATGACCA TGCTGTTGGGGGTTTTGAATTTTGTTCCAAGCTATAGTCATGTAGGACAC TCGGTCGCTGTTGCCCAGCGTTTCACTGAGCTGCTTAAGGGCGCGGTTGC GATACTGTAACATCTATAGTAATGAGTAGTGTGCCTGAAAAACATGGCTT TTTGTTTGGCGTGCCTCTTAGGCGCACTTCCGCACGGCAGGACAGTACAG AAGCAAGAGTCGCTTTGAATCTCTTTCATTTTCCTTTGGTTTGTGGTGTG TTTCCTGCCCCCTACGAAATGGCAAATAGTGGTGGTGTAATAGGAATATA CAGGCCCTCTATTCACTGTTGCTGTTTGGTGCTAGTACACCCTAACCCAA CGTTACCAAGGAGACGCCTATTCCAGAGAACGAGATTCAAACGGATTCTC ATGAGAACCCTCCTCTCGTGTTTCGCTCGCACCCCACGTTGCTATTGCAC CCGGTGTGGTAACACCGTGGACGGTGCAAACGAAAGCCTCGCTCGTGACA GTCCGTCCGTGCGGTGCGATATCAGAGCGGGGGACGATAACAAAGGGTAT TGCGGTATGTGCAAACAAGTACTTTCACTTGGTCCAATGTATCCCTTGAA CAAACCCCGAATGCTCAAGTCGCTGAGGATCGAATTACATCAGGCGAGTA AAATGCTTGTGTGCTACATTTCTGACGTGCAGACATGATGTAAGGCGGCC GTTTCGTTCAGCGTTTTTCGAACTTCAGCTTTGATATCTGAGAGGTTACC TCTGGTTATGCTGTTTGTGCAGGACACATTGGTGGCAATTCGCGTGACCT TACCAGAGAAGGACGAAGACACAGACGAGCCGTCACCAGCAGAGAGTCTT CAAATGGCGGTGAGGTGCTTGAGATGTTTTGGTCACTTTCAGTTTAGGTG CACCTGCTCATTTGTTGTATTATTACGTCAGGAACAGCCTCAAACATGTT CCAAGTTGATAAATCACTCTGTGAGTATCTGCAAAGCGTGCTTCATACTC CCTGCAACCTGAGTCACAGCCTACCTGAAGAAGAAGCCTCGCAGATCTAG ACATGGTTGTCTTGGGTATCGCCGTATGGCCTTTTGTGATTGGCAAAGCA GGGTACGTACTGGTGGCGGCTTTTCCACCACTTCCGCCGTTGAAAGAACC CACTATTTGACAAGCAACCGGTATGTTGCGCGGAAAAGCGCTGGTGGAAC AACAAAATCGACGGACTTAATTTGAATCGTTCGCCAAAGCAGTGTACATG ACCCTCTTTCAGTGTAGCACTAAAAAAAAAATGGCGACTGGAGTACTAAC AATATTTGTAAATGCAAGTGATGTATTTCGACTCCACCAAACGCTCCGAT CTGCAGGTCATCGAGCGTGCCAACATTCATGACGTCAAGGGTAAAGTGCT GGTGGAGTTCAACGAGAACCAGGGTACATTCGACTTTCCGAGAGGCCGGT ACTCGATTGAGATGTACAGCCACTTCATGCGGATGCACGGCTCAAGGTGT GCTGCCTTAATCGTTTATACTGGACTTAGCACTTTGACCGCTCGGGTCCT GGTCTCAATTATACCTGATACTTCGCACTGAAAATTTGTATCAATCGGGG CCATAGTGTGACTGTGGGTTACATTTTTGTGTATGGTATATGTAAGCGCA CATCTGGCTGTTTCCACACGCAATACACAGCGTAGGTGGCTCAGCTTGTT GCTCTTGGCTCTTCACCCTCCATGATCGATAGTAGACGAAAGTTATAATC TTGAACACGATTCTTGTACCACACTCGTTGCTGCCCACAAATGAAATACA TGAGAGGGTTCCCAGACACATTACTACTGGTATGCGGTACTAGTACTTTG TTCAGCACGTTCACGTGTCGCGCAGGTATGACTACAAGATCCAATACAAT GATATTTCCAAGCTATTTTTGCTGGAAAAGCCAGATGAGCGTTATGTGGC GTTTGTGGTATCGCTGGATAAGCCGATTCGCCAGGGTCAACAAAAATACC AGCACCTAGTATTGCGGACGACAAAGGTAAGAATTTTAAAGATATTCTGC ATACAGTAGTGCGATACGCATGCAGGTCAACCTGGAAAACATCATGCCGC ATTTACCGCACTCGTGGTAAGAATGACACGTACTTACTTTCTGAAGGTAA ATGGAGATTTGTTGCCTGTTGGCTGCGTAATGATTTTGGAACAGACATTA TGTGTATTGTTCATATTCCTGTTGAAGGGCTTGAGGGGCATAGCTGATTC TCGGGATCAATTGCGAATGGGTGCTATCCGTCCTGTATCATTCGCCTTGA TGATTGGAGTGTTCGATGTTTTTTGCAGTTGAACGCTGACACGACTTCCC CCTCGGTTCTCAGTCTCAGGCGTGCCCAGGAAACAAAACATTTCCTCTTC CATCTTTTCTTATATATTTTCTTATCGTCTCACCCTTAGTGGTATCAGCC TCCGTGGTGATGATTCTTTCACTGAACTCACAGACTAGAACTCTTGGCTT GTTGAATGTGTTGGTAGATGTGGAAGTAAGCTACGTGGGGCTCGTCCTTC TCCGCTATACTCAGGCATCCAGATCATACCGTCTGTTACAGCAACAGAAT GGGAAATCCCCCGAACGTTCAATATCTGGAATATCCTTTTAAAACATTTT TATCTGTCTTTATTACATCGCATCTAAATGTACGCACAATCAGTGGTAAT ATGAGAAGCTATCGTGTATACTGTCATCCCACAAATATCATTTCGCTCAC TTGGGCTGCAGAACACCAAAGTCTAACATGGAGTTGGAGTCTGGTATGAA CGCCCCTCTCGCAAAATCTGGGCAATGAGTGGTCGCTGCCGTCAATATGA ATCGTTTTCATGTGTCGATTTTTGGTGTCCCTCATGACTGTTGAGTGGAC GCTAGTACGTCTACTACAAGTGGGGCGACAACCATATTGTAAAGTTTTCC GCGTCGTGCGCGAGACACGTCAATTTGATGCAAGACCTCTTTCGTGCGCA CTCCAATTACCAAATGTGTAATGTACAGTGCACGTCTGAGGGTAACGGTG TTGCCACAGTGACGTTGCTGCGTGGAACTCGTACCCGTCACTAGCACAAT ACTTTCCCATGTGCGAGTGGACGTGGCCCTACCGACTGTAGTAGTATTCA ATGCGTTCGCTAGATGTCGTGTTTTCCAGAGACGGTGATGTGGACGCACT TCCCTTGCCCCGGATTGGCCACCCTTAAGTCTGCGTTAACCCGATATCCG CGTAGATCCGGTAAATCGTCGAAATGTAGTATTTGTCTCATGCGTTCCGT TTGCACTCAAACAACCGCCTGTGCGTTTCACTATTTGCTATTGCCCGCAT GTTGTGGCATTTATTGTTAGATACTCGATTAATGCCGACATAAATATGTT GCAACATATATTGAATAACGTTATTCTGAGGAACGTCCATAACTTTAGTT GAAGCTGTTAACTTTGTGTCGGTGACGTCCACTCATAATTCCAGTTGCTC CGATATTGCACGAAGAGGCCATCAAAATGTCCACACTGTCTGTATTATCC CCCAGGACGAGGCTGAGATCGCGGTGAACATGAGCGCTGATGACCTGCAG CAGAAGTACAACGGAAATCTGAATTCCGAGATGACTGGACCACTTCACAA TCTCATCGCCAAGGTGATGTTTTTCAACCATATCAAGTCACTCATGTTCA CGTTCATGAAAAACTTCAAAGAAGTAGCTGCATCAGAGAAGATGGGCTAG TACAGGTAACGCGGGATCGTGATATTTCTTCGCATTCATATTCATATTGT ACACAAGCGATTAAAATAACATTAGCATTTCATGCGTTTCAGCGAAATTT GACACTCGTTCCCAACGCTGAAGAATCAATTCGTAACTTAGAATCGGTGT AGGGACAGACTCGTCGTCGAGGTCTGAAAGGTGATCGTTCTGATATTTTG TAGTTGATCTTTACATTCTCGGAAATCAAGCACACTTAAAATAATGTTTT GTCAGTTGACACTGGGCACACAGCTACAGAGAGTCGAATCTCGAATTGAA GCAGAAGTATTGCTGCAAGACACAGTGTCTAAAGAATGCGTGTTTTACTC GGTGGTCAACCTATTTTACGGTTGCTCTTGTGTCCTGCGACAGGTCGCAA ACTGAGGGGTCGCAGCCGGGAAATACGATAAGTATGAATTGGACGAAACC AGCGCACTGTCATTCATACGCACACTTTTCCTTGGTGTTCTCGGCACTGA TCGTGGAACCGAACCCCTGGGGTTTCTTTCTTCGTGTTTCTTGTACAGAT TTTCAAGGTACTCTCAAACAAGCCAGTATACGTGACCGGGAAATTCAGCA GCAACAGTGGTGCCAAAGCAGTCAAGTGTGCACTTGGCGCTAACGAGGGA CACTTATATCCTCTCAACAAGGTGAACAAACATGGGCATCACATCAAACG GACGCCGTTCGCGCGTGCAAGTTGATGTTGACATGGTCAAGGTCATCAAG CACTCGCATCTTTACCGTGCGTGTGATCGATGTGGATATTTGTACTCACA ACACAATTTTATCCATTCTTACCCTCACCCTTTCGCCGGCAGTCATTCAT CTTCATCCATAAACCAACGTGCATCATTGGCTTCGACGAGATCGACTCGG TTGAGTTTCAACGTTACGGCGGCGCGCAGGTGTGTCAGCACCGTCCAAAT GTAAACATGCCCCCATTGCTCCGTTCGTCAAGTGACGTTTTAGTCAGGTA CTGTTGATTTCCAGCTAGGGTAGCCGTCAAATTATGAACGCCACAGTGAA TGTGAACGAATACGTCCATAGTTGGCGAGGGTCCCTCATGTGTTGAAAAT CTCATACGCTGATGATGGTATCAAGCAGGTGGGACTTGCATACGCCAAGG ACTATCAAATTTGTGGTATCAATGTAGGCGAATTTTCTGTTTGGATTCCA ACAGTCCTGCAGTTGTAGAGGTAAAAATCTCTTGTGTATGCTCTGCTGTC GAGTGCCATCGACCGCTAACATAGCCGCCAACGGTTCTTTTGCTTGACAG GGAGCAGGGGTCACTCGCAACTTCGACCTCTGTGTGGCACCAAAGTCTGT CGCCGGGGAGGTTACAAAACCCTATATCTTCAGCGGCATTGATCGCTCAG AGTACACGTCATTGTACTCGTTTCTCAGCACAAAAAAGCTTCGCATAAAG AATATCAAGCAGAACGGCAACGATGGATCGATGCTGCAGCTTGGGGATCT TGATGATCATGACCCATACAAAGCGGCACTAGACGACGATCAGGTGAAGA TACCGCGTGTTGTGATCGTTGGTAAAGATTCGTCTTGAGTATATCCTTCG ATACACGCTCTCCCTGAAATCCGGGCAGCTCTTTCTTTCGTGAGATGGTT CACTACATGTGACACTTTCACGAGAATACATCATTCCCGCTCCTTCGCAG GGAGACGACGATGATGAGAGCGAAGAAGATGCGGACTATGCCCCCGACGC ACGAGAATCTAACGCTGAGTCTAGCTCCGACTCGGGTGATGCGGGAGACG ACAGTGACGACAGTGAACGCCCGAAATCATCCAAGAAGAAAAAGGAGGCA GCAGTTCCTAAGAAGGAGGCAGTGGCACCTAAGAAACAGGTTAGTTATAT TTAGTAATAATACCACACTGAGAGTGTTTTTGCCATCCTTCCTTACAGGG AAGTATTTTTGTCGTGGATCTGGAAGAGACAGAAATAACGTTCGCTGTTG CTGTGTCCCCTTGGCGCTCATCGGCAATATATCGTAGCGTGCCAAGGCTG TGTCAGGGGGTGCTCCCTCCAAGCCTCCAGCGAAGAAGAAACAGAAGAAG GATCCCAATGCTCCTAAAGGCGCCTCGTCAGCTTTCATGCAATTTTCATC GGCGAAACGCGCAGAGGTAAGAACAAGTTTTTAACTAATAAAGGTCAGGT AGTTTTATTCTAGTAAGGTAGTACTGGTATCCTTGAGTGATTTGGAATCC AGACAGTCAGACGCCATTTCATGATCCACGACCTCACCCTTATCGATGAA CACAGGTAGGATTTCTGTTCAGGGTACTTCATCGTACGAGGACTGTGAAA AAATTCAGTTGCTTGTCTGGCCTCCGATATGATACATCATGCACCGAAGG CACAATTTCCCTTGTTGCGAGCTGACTTGTGCTTTTTATATTCGTTCCTG CGTTGTTTTCTTGTCTTGGGCATACCAATCGCGTTGTTGAAAAAACTAGG TCAAGGCGGCTCAACCCGAGTTGAAGACAACTGAGATTTCGAAGGTGCTA GGGGAACGATGGGGCAAGATGGATGCTGAAGCACGAGCTCCGTACACCGA CAAAGCATATCGAGATAAAGAGAGGTGTGTTTGCTCACAGAAAATATATA TTGGTGAGAGGAAGCGTGAAGAATTTTTGTCGGTTTCGAGACGAATGTCC GATGATTTGACCTGCACACCGTTTACAGATATTGCTCGCGCCAAGCTGAC GATTAATACGATGTATCTCATTGAAAAGGACAACTTCGATATAAGGAGTT TGACTAGAAGACCAACATTTTGAACGTTCGCTAATCTATAAATGTAAATG GTGATTTTTGACGAAAACGTCAGAATAGTTGGGTCTAATATTTTTTCACC TGTAAGAAGGTACAAAGTATACTATTCTGACTTCTAGATCGTGGCTGACA CCACCGACAAAATATAATTTTCAATCTCATCAAGACATGGTCAGAATAGG TGTAAGATTGGTACGATCCATGGAAAGATGAAGCAAACGCACACAACGTG GCAATACAGCAGATATGTGCAAAAGGGGAAGACTGACAAATGTGTGATAT ATATTTGTTTTGTAATTCAGGTACAAAAGGGAGATGGAAAAGTACAAGAG CAGGACCCAAGAAGGGGCAAATGGTCGTCGCAAAGGCAAAGCCGACGGGA GCAACGCTAGTGAAGATTCTTCCTGATTGTGGCGTATTATCTTCCATAAT TCAAGACGAGAGAATGTTGAATGGGGTATCGATCAGATTGTTCTCACCAA AATATATAGGCTATACAACATTTTCGTCAGAATAAAACGTTTGTACCATT CTAATGGACTAAGCAGTTCAAGGGAAAAAAATGTACATTCATCTTGCGTG TACTATTTCAACCGTTGACATTGATATAGATCAGGTGGTGGGAGCAATCA AGCATGTACGACATGGTACTTTGTGAAAATTGTACCGTGTAACAAGTGGG TAGACGAATGTATGAGCCATATAAGGTAGTCGACATCACACGTGTAACAT GCACCGTGTGCAAAAGTGAAGTGAAATGGATGTAGTGCGCAACGATACAG TATCTGTTGCATGTTAAATTAGAGGTCGTGTCTTCTGTGGTTGGGCTCAG TTTTGTTAATGATAAGAAGTTGCTTGCACTA
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Coding sequence (CDS) from alignment at H-paniculata_contig2733:4190..14220+

>mRNA_H-paniculata_contig2733.7483.1 ID=mRNA_H-paniculata_contig2733.7483.1|Name=mRNA_H-paniculata_contig2733.7483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3918bp|location=Sequence derived from alignment at H-paniculata_contig2733:4190..14220+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACTTCCCGAAGATTGGAATCCAAGGACATAGCCTTGGATCCCTACA
ACTCAGTTCGGAAGAGCTCGTGTGGACGTCCGCAGACAAGTCGAGATGAA
CTTCCCGAAGATTGGAATCCAAGGACATAGCCTTGGATCCCTACAACTCA
GTTCGGAAGAGCTCGTGTGGACGTCCGCAGACAAGTCGAGCGCCAAGAAG
GTGAAATGGGCAACTGTTTCTCATGCAACGTGGGCCCAGTTTGCAGAGTA
CTGTCACCTCCGACTATTCCTGCAAAACGACCTTCCTCCTGTTCGGCTCG
ACGGCTTCAGCAAAGCGCAGTATGCAGCGCCAAGAAGGTGAAATGGGCAA
CTGTTTCTCATGCAACGTGGGCCCAGTTTGCAGAGTACTGTCACCTCCGA
CTATTCCTGCAAAACGACCTTCCTCCTGTTCGGCTCGACGGCTTCAGCAA
AGCGCAGTATGCAGACGTCGATAAATTTTTGTCCAAGCTCGACATCCGTC
TATCGAAGGACCGGATAAATGCTGGAGGAGGAAATTATGGCGAGCTAGAG
GTGCTCGACAACATCGTGCGCTTCAGTTCGGAAAATAGACGTCGATAAAT
TTTTGTCCAAGCTCGACATCCGTCTATCGAAGGACCGGATAAATGCTGGA
GGAGGAAATTATGGCGAGCTAGAGGTGCTCGACAACATCGTGCGCTTCAG
TTCGGAAAATAGGACCCTGTTTGACCTCAACATCAAGGACGTCAGCCAGT
GCGTTATGCCAGGGGTGAAGAAGAGCAACGACGTAGAATTGCAATTCCAC
GAGAGCGATGCGACGGACCAAACGGAGGACCCTGTTTGACCTCAACATCA
AGGACGTCAGCCAGTGCGTTATGCCAGGGGTGAAGAAGAGCAACGACGTA
GAATTGCAATTCCACGAGAGCGATGCGACGGACCAAACGGAGGACACATT
GGTGGCAATTCGCGTGACCTTACCAGAGAAGGACGAAGACACAGACGAGC
CGTCACCAGCAGAGAGTCTTCAAATGGCGGACACATTGGTGGCAATTCGC
GTGACCTTACCAGAGAAGGACGAAGACACAGACGAGCCGTCACCAGCAGA
GAGTCTTCAAATGGCGGTCATCGAGCGTGCCAACATTCATGACGTCAAGG
GTAAAGTGCTGGTGGAGTTCAACGAGAACCAGGGTACATTCGACTTTCCG
AGAGGCCGGTACTCGATTGAGATGTACAGCCACTTCATGCGGATGCACGG
CTCAAGGTCATCGAGCGTGCCAACATTCATGACGTCAAGGGTAAAGTGCT
GGTGGAGTTCAACGAGAACCAGGGTACATTCGACTTTCCGAGAGGCCGGT
ACTCGATTGAGATGTACAGCCACTTCATGCGGATGCACGGCTCAAGGTAT
GACTACAAGATCCAATACAATGATATTTCCAAGCTATTTTTGCTGGAAAA
GCCAGATGAGCGTTATGTGGCGTTTGTGGTATCGCTGGATAAGCCGATTC
GCCAGGGTCAACAAAAATACCAGCACCTAGTATTGCGGACGACAAAGGTA
TGACTACAAGATCCAATACAATGATATTTCCAAGCTATTTTTGCTGGAAA
AGCCAGATGAGCGTTATGTGGCGTTTGTGGTATCGCTGGATAAGCCGATT
CGCCAGGGTCAACAAAAATACCAGCACCTAGTATTGCGGACGACAAAGGA
CGAGGCTGAGATCGCGGTGAACATGAGCGCTGATGACCTGCAGCAGAAGT
ACAACGGAAATCTGAATTCCGAGATGACTGGACCACTTCACAATCTCATC
GCCAAGGACGAGGCTGAGATCGCGGTGAACATGAGCGCTGATGACCTGCA
GCAGAAGTACAACGGAAATCTGAATTCCGAGATGACTGGACCACTTCACA
ATCTCATCGCCAAGATTTTCAAGGTACTCTCAAACAAGCCAGTATACGTG
ACCGGGAAATTCAGCAGCAACAGTGGTGCCAAAGCAGTCAAGTGTGCACT
TGGCGCTAACGAGGGACACTTATATCCTCTCAACAAGATTTTCAAGGTAC
TCTCAAACAAGCCAGTATACGTGACCGGGAAATTCAGCAGCAACAGTGGT
GCCAAAGCAGTCAAGTGTGCACTTGGCGCTAACGAGGGACACTTATATCC
TCTCAACAAGTCATTCATCTTCATCCATAAACCAACGTGCATCATTGGCT
TCGACGAGATCGACTCGGTTGAGTTTCAACGTTACGGCGGCGCGCAGTCA
TTCATCTTCATCCATAAACCAACGTGCATCATTGGCTTCGACGAGATCGA
CTCGGTTGAGTTTCAACGTTACGGCGGCGCGCAGGGAGCAGGGGTCACTC
GCAACTTCGACCTCTGTGTGGCACCAAAGTCTGTCGCCGGGGAGGTTACA
AAACCCTATATCTTCAGCGGCATTGATCGCTCAGAGTACACGTCATTGTA
CTCGTTTCTCAGCACAAAAAAGCTTCGCATAAAGAATATCAAGCAGAACG
GCAACGATGGATCGATGCTGCAGCTTGGGGATCTTGATGATCATGACCCA
TACAAAGCGGCACTAGACGACGATCAGGGAGCAGGGGTCACTCGCAACTT
CGACCTCTGTGTGGCACCAAAGTCTGTCGCCGGGGAGGTTACAAAACCCT
ATATCTTCAGCGGCATTGATCGCTCAGAGTACACGTCATTGTACTCGTTT
CTCAGCACAAAAAAGCTTCGCATAAAGAATATCAAGCAGAACGGCAACGA
TGGATCGATGCTGCAGCTTGGGGATCTTGATGATCATGACCCATACAAAG
CGGCACTAGACGACGATCAGGGAGACGACGATGATGAGAGCGAAGAAGAT
GCGGACTATGCCCCCGACGCACGAGAATCTAACGCTGAGTCTAGCTCCGA
CTCGGGTGATGCGGGAGACGACAGTGACGACAGTGAACGCCCGAAATCAT
CCAAGAAGAAAAAGGAGGCAGCAGTTCCTAAGAAGGAGGCAGTGGCACCT
AAGAAACAGGGAGACGACGATGATGAGAGCGAAGAAGATGCGGACTATGC
CCCCGACGCACGAGAATCTAACGCTGAGTCTAGCTCCGACTCGGGTGATG
CGGGAGACGACAGTGACGACAGTGAACGCCCGAAATCATCCAAGAAGAAA
AAGGAGGCAGCAGTTCCTAAGAAGGAGGCAGTGGCACCTAAGAAACAGCG
TGCCAAGGCTGTGTCAGGGGGTGCTCCCTCCAAGCCTCCAGCGAAGAAGA
AACAGAAGAAGGATCCCAATGCTCCTAAAGGCGCCTCGTCAGCTTTCATG
CAATTTTCATCGGCGAAACGCGCAGAGCGTGCCAAGGCTGTGTCAGGGGG
TGCTCCCTCCAAGCCTCCAGCGAAGAAGAAACAGAAGAAGGATCCCAATG
CTCCTAAAGGCGCCTCGTCAGCTTTCATGCAATTTTCATCGGCGAAACGC
GCAGAGGTCAAGGCGGCTCAACCCGAGTTGAAGACAACTGAGATTTCGAA
GGTGCTAGGGGAACGATGGGGCAAGATGGATGCTGAAGCACGAGCTCCGT
ACACCGACAAAGCATATCGAGATAAAGAGAGGTCAAGGCGGCTCAACCCG
AGTTGAAGACAACTGAGATTTCGAAGGTGCTAGGGGAACGATGGGGCAAG
ATGGATGCTGAAGCACGAGCTCCGTACACCGACAAAGCATATCGAGATAA
AGAGAGGTACAAAAGGGAGATGGAAAAGTACAAGAGCAGGACCCAAGAAG
GGGCAAATGGTCGTCGCAAAGGCAAAGCCGACGGGAGCAACGCTAGTGAA
GATTCTTCCTGAGTACAAAAGGGAGATGGAAAAGTACAAGAGCAGGACCC
AAGAAGGGGCAAATGGTCGTCGCAAAGGCAAAGCCGACGGGAGCAACGCT
AGTGAAGATTCTTCCTGA
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