prot_H-paniculata_contig2732.7482.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2732.7482.1
Unique Nameprot_H-paniculata_contig2732.7482.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length93
Homology
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BLAST of mRNA_H-paniculata_contig2732.7482.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 1.270e-13
Identity = 39/74 (52.70%), Postives = 51/74 (68.92%), Query Frame = 0 
Query:   20 QSQSIARGVRAPVPGGYAFNSAQERLWGLFSRHTTITLAILYLVYSSVSTTVLRTFACMRLMEVNEEYLTADFR 93
            ++QS+   +RA    G   N  QERLWGLF+RHTTI L +LYLVY+ +ST V +TF+C  L E+ + YL ADFR
Sbjct: 1163 RAQSVRNLLRAKS--GQQKNPEQERLWGLFARHTTIMLIVLYLVYTQISTVVFQTFSCEDLPEIGKSYLRADFR 1234
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BLAST of mRNA_H-paniculata_contig2732.7482.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.130e-12
Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 0 
Query:   39 NSAQERLWGLFSRHTTITLAILYLVYSSVSTTVLRTFACMRLMEVNEEYLTADF 92
            N  QERLWGLF+RHTT+ L +LYLVY+ +ST V +TFAC  L E+ + YL ADF
Sbjct: 1413 NPEQERLWGLFARHTTMMLIVLYLVYTQISTVVFQTFACEHLPEIGKRYLRADF 1466
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2732.7482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G119_ECTSI1.270e-1352.70Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5K4A5_9PHAE1.130e-1261.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2732contigH-paniculata_contig2732:16810..19103 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2732.7482.1mRNA_H-paniculata_contig2732.7482.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2732 16810..19104 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2732.7482.1 ID=prot_H-paniculata_contig2732.7482.1|Name=mRNA_H-paniculata_contig2732.7482.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=93bp
SRSRSIDKIREKDTLSDGEQSQSIARGVRAPVPGGYAFNSAQERLWGLFS
RHTTITLAILYLVYSSVSTTVLRTFACMRLMEVNEEYLTADFR
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