mRNA_H-paniculata_contig27317.7477.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A835YVU8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVU8_9STRA) HSP 1 Score: 182 bits (462), Expect = 7.950e-51 Identity = 84/123 (68.29%), Postives = 102/123 (82.93%), Query Frame = 1
Query: 1 ARLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFIDNWGMGPEVVSLGHNPYAGQWIDRHITLPTSR 369
AR+G RT+VIVD P VHQL ESF+SKLFSM YSF ++VHG + DHFVHRFTHRV RG+L+AVGRPDGRL +LT TE++ LLA KQA FIDNWG+GPE V++GHNPY+ D+HITLP++R
Sbjct: 1068 ARMGARTIVIVDMPMVHQLTESFVSKLFSMGYSFVSVDVHGASGADHFVHRFTHRVVRGLLLAVGRPDGRLCALTKTEATVLLAVKQAVFIDNWGVGPETVTVGHNPYSPAVFDKHITLPSNR 1190
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A1W5IZH8_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Pleodorina californica TaxID=47285 RepID=A0A1W5IZH8_9CHLO) HSP 1 Score: 157 bits (397), Expect = 3.160e-43 Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 4 RLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFIDNWGMGPEVVSLGHNPYAGQWIDRHITLPTSRSK 375
R+GKRT+V+ D P VHQ+ E+F+SK++++SY +EVHG N DHFVHRFTHRV RG+LIA+GRPDGRL S T +ES LL QA I +WG PEVVS+GHNPY +D H+ LPT+R +
Sbjct: 85 RMGKRTIVVADVPYVHQIIETFVSKMYALSYGIASVEVHGANPVDHFVHRFTHRVVRGLLIALGRPDGRLYSQTKSESWVLLGLLQAKVITSWGHQPEVVSIGHNPYHPAVVDTHLQLPTNRPR 208
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A8J5X648_DIALT (Uncharacterized protein n=4 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X648_DIALT) HSP 1 Score: 159 bits (401), Expect = 1.310e-42 Identity = 80/133 (60.15%), Postives = 99/133 (74.44%), Query Frame = 1
Query: 1 ARLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFI--------DNWGMGPEVVSLGHNPYAGQWIDRHITLPTSRSK 375
AR GKRT+VIV++P HQ+ E+F+SKLF+ SYSF ++VHG + DHFVHRFTHRVSRGVLIAVGRPDGRL L TE+S +LACKQAAFI D+ G PE+VSLGHNP+ + HI LP+S+ +
Sbjct: 1001 ARHGKRTLVIVESPTNHQMLEAFVSKLFAQSYSFCSLDVHGASGVDHFVHRFTHRVSRGVLIAVGRPDGRLCCLAKTEASLILACKQAAFIANPAYSMADDSGNAPEIVSLGHNPFKPAGVVSHIALPSSQRR 1133
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A7S0WIU0_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WIU0_9CRYP) HSP 1 Score: 152 bits (383), Expect = 1.610e-42 Identity = 75/126 (59.52%), Postives = 92/126 (73.02%), Query Frame = 1
Query: 1 ARLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFIDNWGMGPEVVSLGHNPYAG-QWIDRHITLPTSRSK 375
ARLGKRT+V+ D P VHQL ES++SKLFS+SYS ++VHG N DH VHRFTHRVSRGVL+A GRPDGRL S+T ES L+A +Q I + G PEV++LGHNPY +D H+ LP+ R K
Sbjct: 41 ARLGKRTLVVGDVPYVHQLLESYVSKLFSLSYSIASLDVHGANAIDHLVHRFTHRVSRGVLVAAGRPDGRLFSMTKAESWVLMALQQCKAIVHLGAPPEVLTLGHNPYRDPSVVDTHVCLPSLRPK 166
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A1W5IU17_PANMO (Uncharacterized protein (Fragment) n=1 Tax=Pandorina morum TaxID=33099 RepID=A0A1W5IU17_PANMO) HSP 1 Score: 157 bits (398), Expect = 2.280e-42 Identity = 73/124 (58.87%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 4 RLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFIDNWGMGPEVVSLGHNPYAGQWIDRHITLPTSRSK 375
R+GKRT+VI D P VHQ+ E+F+SK++++SY +EVHG N DHFVHRFTHRV RG+LIA+GRPDGRL S T +ES LL QA I +WG PEVVS+GHNPY +D H+ LPT+R +
Sbjct: 329 RMGKRTIVIADVPYVHQILETFVSKMYALSYGIASVEVHGANPVDHFVHRFTHRVVRGLLIALGRPDGRLYSQTKSESWVLLGLLQAKVITSWGHQPEVVSIGHNPYHPAVVDTHLQLPTNRPR 452
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A8J4EV38_9CHLO (Uncharacterized protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EV38_9CHLO) HSP 1 Score: 158 bits (399), Expect = 2.480e-42 Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 4 RLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFIDNWGMGPEVVSLGHNPYAGQWIDRHITLPTSRSK 375
R+GKRT+V+ D P VHQ+ E+F+SK++++SY +EVHG N DHFVHRFTHRV RG+LIA+GRPDGRL S T +ES LL QA I +WG PEVVS+GHNPY +D H+ LPT+R +
Sbjct: 1767 RMGKRTIVVADVPYVHQIIETFVSKMYALSYGIASVEVHGANPVDHFVHRFTHRVVRGLLIALGRPDGRLYSQTKSESWVLLGLLQAKVITSWGHQPEVVSIGHNPYHPSVVDHHLQLPTNRPR 1890
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A8J4C7G7_9CHLO (Uncharacterized protein n=2 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4C7G7_9CHLO) HSP 1 Score: 158 bits (399), Expect = 2.480e-42 Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 4 RLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFIDNWGMGPEVVSLGHNPYAGQWIDRHITLPTSRSK 375
R+GKRT+V+ D P VHQ+ E+F+SK++++SY +EVHG N DHFVHRFTHRV RG+LIA+GRPDGRL S T +ES LL QA I +WG PEVVS+GHNPY +D H+ LPT+R +
Sbjct: 1781 RMGKRTIVVADVPYVHQIIETFVSKMYALSYGIASVEVHGANPVDHFVHRFTHRVVRGLLIALGRPDGRLYSQTKSESWVLLGLLQAKVITSWGHQPEVVSIGHNPYHPSVVDHHLQLPTNRPR 1904
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A1W6R6N1_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Yamagishiella unicocca TaxID=51707 RepID=A0A1W6R6N1_9CHLO) HSP 1 Score: 157 bits (398), Expect = 2.890e-42 Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 4 RLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFIDNWGMGPEVVSLGHNPYAGQWIDRHITLPTSRSK 375
R+GKRT+V+ D P VHQ+ E+F+SK++++SY +EVHG N DHFVHRFTHRV RG+LIA+GRPDGRL S T +ES LL QA I +WG PEVVS+GHNPY +D H+ LPT+R +
Sbjct: 406 RMGKRTIVVADVPYVHQIIETFVSKMYALSYGIASVEVHGANPADHFVHRFTHRVVRGLLIALGRPDGRLYSQTKSESWVLLGLLQAKVITSWGHQPEVVSVGHNPYHPSVVDTHLQLPTNRPR 529
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A7S1UHH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHH6_9STRA) HSP 1 Score: 152 bits (385), Expect = 4.030e-42 Identity = 77/130 (59.23%), Postives = 97/130 (74.62%), Query Frame = 1
Query: 1 ARLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFIDNWGM----GPEVVSLGHNPYAGQWI-DRHITLPTSRSK 375
+RLG RTVVIVDTP VH+L E+FLSKLFS +YSF I+VH GN D FVH +THRV RGVL+AVGR DGR+ +LT TE + +L+CKQA FI+N + GPEV+S GHNPY + D H+TLP+ + +
Sbjct: 9 SRLGSRTVVIVDTPLVHRLLEAFLSKLFSQAYSFVSIDVHSGNGVDDFVHWYTHRVVRGVLLAVGRVDGRMSALTKTEQATILSCKQARFIENPDLPGHTGPEVISCGHNPYWDAALEDEHVTLPSHQRR 138
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Match: A0A835Y6D4_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y6D4_9CHLO) HSP 1 Score: 157 bits (396), Expect = 6.290e-42 Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 1
Query: 4 RLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHRFTHRVSRGVLIAVGRPDGRLRSLTVTESSALLACKQAAFIDNWGMGPEVVSLGHNPYAGQWIDRHITLPTSRSK 375
R+GKRT+V+ D P VHQ+ E+F+SK++++SY +EVHG N DHFVHRFTHRV RG+LIA+GRPDGRL S T +ES LL QA I +WG PEVVS+GHNPY +D H+ LPT+R +
Sbjct: 1749 RMGKRTIVVADVPYVHQILETFVSKMYALSYGIASVEVHGANPLDHFVHRFTHRVVRGLLIALGRPDGRLYSQTKSESWVLLGLLQAKVITSWGHQPEVVSVGHNPYHPPVVDTHLCLPTNRPR 1872 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27317.7477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27317.7477.1 >prot_H-paniculata_contig27317.7477.1 ID=prot_H-paniculata_contig27317.7477.1|Name=mRNA_H-paniculata_contig27317.7477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp ARLGKRTVVIVDTPCVHQLAESFLSKLFSMSYSFNGIEVHGGNICDHFVHback to top mRNA from alignment at H-paniculata_contig27317:482..1987- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27317.7477.1 ID=mRNA_H-paniculata_contig27317.7477.1|Name=mRNA_H-paniculata_contig27317.7477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1506bp|location=Sequence derived from alignment at H-paniculata_contig27317:482..1987- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27317:482..1987- >mRNA_H-paniculata_contig27317.7477.1 ID=mRNA_H-paniculata_contig27317.7477.1|Name=mRNA_H-paniculata_contig27317.7477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at H-paniculata_contig27317:482..1987- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |