mRNA_H-paniculata_contig2730.7475.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: D8LGM4_ECTSI (Putative carbonic anhydrase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGM4_ECTSI) HSP 1 Score: 192 bits (487), Expect = 1.840e-53 Identity = 130/198 (65.66%), Postives = 151/198 (76.26%), Query Frame = 1
Query: 259 MAGAVRTLGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVLAAGNVSIGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGQLWGGNPAVFMREITAEEKAQLIKSAEGYSALA 852
M RTLG+ LRETGQA+ RFG +C DS L++ETFSRHRQ+MPL + P+V DAWVAPSA+L+G+VDVS +ASVWYGAVVRGD G+V IG GSNVQDDA+L +G+VS+G GV XXXXXXXXXXXXXXXXXXXXXXXXXXX GQ+WGGNPAV+MR++T EKAQL KSAEGY ALA
Sbjct: 1 MTSVSRTLGRCLRETGQALHRFGHQCQDSTLIMETFSRHRQLMPLAASAPAVAKDAWVAPSATLVGEVDVSGEASVWYGAVVRGDTGAVAIGKGSNVQDDAILGSGDVSVGAGVTIGHGAIIKSSTVADGSMVXXXXXXXXXXXXXXXXXXXXXXXXXXXVVGAGQVWGGNPAVYMRDVTPAEKAQLTKSAEGYVALA 198
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: A0A835Z4X6_9STRA (Putative carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X6_9STRA) HSP 1 Score: 140 bits (353), Expect = 1.780e-34 Identity = 84/199 (42.21%), Postives = 108/199 (54.27%), Query Frame = 1
Query: 259 MAGAVRTLGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVLAAGNVSIGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGQLWGGNPAVFMREITAEEKAQLIKSAEGYSALAA 855
MA R +GKM+RETGQA++ G+ D + E F+RHR MPL P++ AWVAP+AS++G V +++ ASVWYGAVVRGD VT+GA SNVQDDAVL+ G ++GE V +GQ+W GNPAVF R +T +EKA L KSA Y+ALAA
Sbjct: 1 MAALTRMIGKMVRETGQALEVLGVIAGDDKIHQEYFTRHRHTMPLGANKPALAPGAWVAPTASVVGDVALATDASVWYGAVVRGDAQRVTVGARSNVQDDAVLSGG-AALGEDVTVGHGAIIAGSTVGDRCLIGMKAVLDGADVASDAIIAANAVVRPGSKVLSGQMWAGNPAVFRRALTPDEKAYLAKSAASYAALAA 198
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: A0A485KRQ9_9STRA (Aste57867_10750 protein n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A485KRQ9_9STRA) HSP 1 Score: 124 bits (311), Expect = 1.730e-28 Identity = 91/209 (43.54%), Postives = 122/209 (58.37%), Query Frame = 1
Query: 256 IMAGAVRTLGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVL---------AAGNVSIGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PTGQLWGGNPAVFMREITAEEKAQLIKSAEGYSALA 852
+M A+ LG+ +RETGQA+DR GL+ + + E FSRHRQVM L D +PS+ DAWVAP+AS+IG V++ + +SVWYG V+RGD V+IG +N+QD V+ A SIG V XXXXXXXXXXXXXXX P+GQLW G+PA ++R+++ +E A L+K A Y+ LA
Sbjct: 1 MMRKAIFELGRAVRETGQAVDRLGLRVLGNNQHREKFSRHRQVMALYDKVPSIAFDAWVAPNASVIGDVEICNDSSVWYGVVIRGDLNKVSIGNRTNIQDRTVIHTSSTATPGLAPGTSIGNDVTVGHGAILYSCTVENNVLVGMGSIVLDGALVXXXXXXXXXXXXXXXRRIPSGQLWAGSPAQYVRDVSEDEVADLVKQAAEYTKLA 209
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: M0ZVI4_SOLTU (Protein yrdA n=12 Tax=Solanaceae TaxID=4070 RepID=M0ZVI4_SOLTU) HSP 1 Score: 120 bits (302), Expect = 6.430e-27 Identity = 100/205 (48.78%), Postives = 128/205 (62.44%), Query Frame = 1
Query: 268 AVRTLGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVL--AAGNVS-------IGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PTGQLWGGNPAVFMREITAEEKAQLIKSAEGYSALA 852
A+ T+G +RETGQA+DR G + + E SRHR +M L D +P VE DA+VAPSAS+IG V + AS+WYG V+RGD SV+IGAG+NVQD++++ A N+S IG+ V XXXXXXXXXXXXXXXXXXXXX P G++WGGNPA F+R++T EE A + +SA YS LA
Sbjct: 7 AIYTVGFWIRETGQALDRLGCRLQGNYYFQEHLSRHRTLMNLFDKVPVVEKDAFVAPSASIIGDVHIGRSASIWYGCVLRGDVNSVSIGAGTNVQDNSLIHVAKSNISGKVLPTIIGKNVTIGHSAVLHGCTVEDEAFIGMGAXXXXXXXXXXXXXXXXXXXXXQNTRIPFGEVWGGNPARFLRKLTEEEIAFISESAANYSNLA 211
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: A0A8J5BTF2_ZINOF (Uncharacterized protein n=2 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5BTF2_ZINOF) HSP 1 Score: 120 bits (300), Expect = 6.900e-27 Identity = 75/205 (36.59%), Postives = 108/205 (52.68%), Query Frame = 1
Query: 268 AVRTLGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVL--AAGNVS-------IGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PTGQLWGGNPAVFMREITAEEKAQLIKSAEGYSALA 852
A+ T+G +RETGQA+DR G + + L E SRHR +M L D +PSV DA+VAPSAS+IG V V +S+WYG V++GD S+ +G+G+N+QD++++ A N+S IG+ V P G++WGGNPA FMR++T EE A +++SA Y+ LA
Sbjct: 7 AIYTVGFWIRETGQAIDRLGCRLQGNYLFQEQLSRHRTLMNLFDKVPSVHKDAFVAPSASIIGDVQVGQGSSIWYGCVLQGDVNSIHVGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTIGHSAVLHGCTVEDEAFVGTGAVLLDGVIVEKHGMVAAGSLVRQNTRVPCGEVWGGNPAKFMRKLTEEEMAFIVQSAANYANLA 211
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: A0A067C675_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C675_SAPPC) HSP 1 Score: 119 bits (299), Expect = 7.170e-27 Identity = 94/201 (46.77%), Postives = 119/201 (59.20%), Query Frame = 1
Query: 280 LGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVL---------AAGNVSIGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-TGQLWGGNPAVFMREITAEEKAQLIKSAEGYSALA 852
LG+ +RETGQAMDR GL+ + S E FSRHRQ+M L D +PSV D+WVAP+AS+IG V++ + ASVWYG V+RGD V+IG +N+QD V+ A SIG V XXXXXXXXXXXXXXXXXXX +GQLW G+PA ++R++T +E A L A+ Y LA
Sbjct: 9 LGRCVRETGQAMDRLGLRVLGSNEAREKFSRHRQIMNLYDKVPSVAYDSWVAPNASVIGDVEICNDASVWYGVVIRGDLNKVSIGNRTNIQDRTVIHTSSTTTPGLAPGASIGNDVTVGHGCILYSCTIENNCLIGMGSIVLDGAXXXXXXXXXXXXXXXXXXXXXSGQLWAGSPAQYVRDVTEDEIADLTNQAKEYKKLA 209
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: A0A7J7CZ61_TRIWF (Gamma carbonic anhydrase 1 mitochondrial n=3 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CZ61_TRIWF) HSP 1 Score: 118 bits (296), Expect = 4.480e-26 Identity = 102/205 (49.76%), Postives = 132/205 (64.39%), Query Frame = 1
Query: 268 AVRTLGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVL--AAGNVS-------IGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PTGQLWGGNPAVFMREITAEEKAQLIKSAEGYSALA 852
AV T+G +RETGQAMDR G + + E SRHR +M L D P V+ DA+VAPSAS+IG V + S +S+WYG VVRGD S++IG+G+N+QD++++ A N+S IG+ V XXXXXXXXXXXXXXXXXXXXXXXXX P G++WGGNPA F+R++T EE A + +SA Y+ LA
Sbjct: 7 AVYTVGFWIRETGQAMDRLGCRLQGNNYFKEQLSRHRTLMNLFDKAPMVDKDAFVAPSASVIGDVQIGSGSSIWYGCVVRGDVNSISIGSGTNIQDNSLVHVAKSNLSGKVLPTIIGDNVTVGHSAVLHGCTVEDEAFVGMGAXXXXXXXXXXXXXXXXXXXXXXXXXIPCGEVWGGNPAKFLRKLTDEEMAFISQSALNYTNLA 211
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: A0A2P6TR65_CHLSO (Gamma carbonic anhydrase mitochondrial-like n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TR65_CHLSO) HSP 1 Score: 117 bits (292), Expect = 5.000e-26 Identity = 95/205 (46.34%), Postives = 120/205 (58.54%), Query Frame = 1
Query: 274 RTLGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVL----------AAGNVSIGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGQLWGGNPAVFMREITAEEKAQLIKSAEGYSALAAE 858
R LGK LRETGQA+DR G + E +RHR + PL +PS+ DA+VAPSA++IG V + S++SV+YG+VVR DCGS+TIG SNVQD V+ +A V E XXXXXXXXXXXXXXXXX +G++WGGNPAVF+R++ EE A L +SAE Y+ LAAE
Sbjct: 3 RALGKALRETGQALDRLGRTLQGNFAFREELNRHRSLAPLLGKVPSLGRDAFVAPSAAVIGDVRLGSQSSVFYGSVVRADCGSITIGDKSNVQDGCVIRTAPAYLAGRSADTVIGREVTIGHQASLHGCTVGDRALVGMGATLLEGSEVEXXXXXXXXXXXXXXXXXXSGEIWGGNPAVFLRKLKPEEAAFLGESAEHYARLAAE 207
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: A0A2G3AAM4_CAPAN (gamma carbonic anhydrase 1, mitochondrial-like n=4 Tax=Capsicum TaxID=4071 RepID=A0A2G3AAM4_CAPAN) HSP 1 Score: 118 bits (295), Expect = 5.190e-26 Identity = 101/209 (48.33%), Postives = 129/209 (61.72%), Query Frame = 1
Query: 268 AVRTLGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVL--AAGNVS-------IGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PTGQLWGGNPAVFMREITAEEKAQLIKSAEGYSALAAEAH 864
A T+G +RETGQA+DR G + + E SRHR +M L D +P V+ DA+VAPSASL G V + AS+WYG V+RGD SV+IGAG+NVQD++++ A N+S IG+ V XXXXXXXXXXXXXXXXXXXXX P G++WGGNPA F+R++T EE A + +SA YS LA +AH
Sbjct: 7 AFYTVGFWIRETGQALDRLGCRLQGNYYFQEHLSRHRTLMNLFDKVPVVDEDAFVAPSASLTGDVHIGRNASIWYGCVLRGDVNSVSIGAGTNVQDNSLIHVAKSNISGKVLPTIIGKNVTIGHSAVLHGCTVEDEAFIGMGAXXXXXXXXXXXXXXXXXXXXXQNTRIPFGEVWGGNPARFLRKLTEEEIAFISESASNYSKLA-QAH 214
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Match: A0A7S1U829_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U829_9STRA) HSP 1 Score: 116 bits (291), Expect = 6.650e-26 Identity = 110/201 (54.73%), Postives = 133/201 (66.17%), Query Frame = 1
Query: 259 MAGAVRTLGKMLRETGQAMDRFGLKCVD-SPLVLETFSRHRQVMPLKDTIPSVETDAWVAPSASLIGKVDVSSKASVWYGAVVRGDCGSVTIGAGSNVQDDAVLAAGN---VSIGEGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTGQLWGGNPAVFMREITAEEKAQLIKSAEGYSAL 849
MA + T+G+ LRETGQAMDR GL +D L +RHRQ+M L+ +PS+ D WVAPSAS IG V VS+ ASVWYG V+RGD + +G GSN+QD + V+IG V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QLW GNPA +R++T +E ++K AE Y+ L
Sbjct: 1 MARFINTIGRALRETGQAMDRLGLAAMDVENTFLVPLNRHRQLMNLEGKVPSLSGDVWVAPSASAIGDVAVSAGASVWYGTVLRGDAAPIVVGPGSNIQDLTSITTSEGAGVTIGSKVTVGHKAMLHGCSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-QLWAGNPATHVRDLTPDEVQAMVKQAEAYATL 200 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2730.7475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2730.7475.1 >prot_H-paniculata_contig2730.7475.1 ID=prot_H-paniculata_contig2730.7475.1|Name=mRNA_H-paniculata_contig2730.7475.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=212bp MAGAVRTLGKMLRETGQAMDRFGLKCVDSPLVLETFSRHRQVMPLKDTIPback to top mRNA from alignment at H-paniculata_contig2730:10307..19563+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2730.7475.1 ID=mRNA_H-paniculata_contig2730.7475.1|Name=mRNA_H-paniculata_contig2730.7475.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9257bp|location=Sequence derived from alignment at H-paniculata_contig2730:10307..19563+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2730:10307..19563+ >mRNA_H-paniculata_contig2730.7475.1 ID=mRNA_H-paniculata_contig2730.7475.1|Name=mRNA_H-paniculata_contig2730.7475.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1272bp|location=Sequence derived from alignment at H-paniculata_contig2730:10307..19563+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |