mRNA_H-paniculata_contig2730.7474.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: A0A6H5L555_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L555_9PHAE) HSP 1 Score: 364 bits (934), Expect = 9.010e-111 Identity = 191/267 (71.54%), Postives = 218/267 (81.65%), Query Frame = 2
Query: 806 SLFVRFSAQGRVAARLLGDFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGWADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIRKHLHAAVASREA*KTH 1606
++ R A+G +AARL+ DF AA++AS+MVSPFISI DRA+IQSASGSM M+ SV QG RV+ TKP LFLARPDF+ TF L+G TYLAAN IST+A E RSDT P+F GTTA+NMPGSI KDQALTKIFG VG AA VP ASFALFTVRD+ATMAAAFTLPTPMSA+MQE GV+SG AD SQLVSPGLVQVFSTPVHILGLD+YNHP SS R++VVQ SF PAI +R+ARIGVAFG+GGLGNT+IR LH A+A K H
Sbjct: 49 NILERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEYSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSARMQESFGVDSGMADVTSQLVSPGLVQVFSTPVHILGLDLYNHPRSSCRARLRVVQDSFMPAIAMRVARIGVAFGVGGLGNTSIRNMLHGAIAKSSWAKQH 315
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: D8LGM5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGM5_ECTSI) HSP 1 Score: 312 bits (799), Expect = 3.420e-92 Identity = 177/276 (64.13%), Postives = 202/276 (73.19%), Query Frame = 2
Query: 782 GSAAGT-LPSLFVRFSAQGRVAARLLGDFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGWADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIRKHLHAAVASREA*KTH 1606
GSA G + +L R A+G +AARL+ DF AA++AS+MVSPFISI DRA+IQSASGSM M+ SV QG RV+ TKP LFLARPDF+ TF L+G TYLAAN IST+A E RSDT P+F GTTA+NMPGSI KDQALTKIFG VG AA VP ASFALFTVRD+ATMAAAFTLPTPMS KMQ+ GV+SG AD SQLVSPGLVQ+FSTP SF PAI +R+ARIGVAFG+GGLGNT+IR LH A+A K H
Sbjct: 73 GSAGGVGVGNLLERLGARGVLAARLVSDFAAASMASLMVSPFISIVDRAIIQSASGSMGMKASVAQGFRVLATKPALFLARPDFICTFCLYGATYLAANTISTMADEFSRSDTMPKFLGTTAINMPGSIAKDQALTKIFGVVGSAAKVPAASFALFTVRDVATMAAAFTLPTPMSTKMQD-FGVDSGMADVTSQLVSPGLVQLFSTP------------------------DSFMPAIAMRVARIGVAFGVGGLGNTSIRNKLHGAIAKSAWAKQH 323
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: A0A835Z5G8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G8_9STRA) HSP 1 Score: 211 bits (538), Expect = 9.400e-58 Identity = 109/241 (45.23%), Postives = 160/241 (66.39%), Query Frame = 2
Query: 860 DFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGWADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIRKHLHAAVA 1582
D +A AS MVSPFI+I DR++IQ+ASG M M +S+R G++ ++ +P +FL RP+FL FG++ TY ANA++T K WPRF T+AVNM I KD+A T++FG+ A +P++++ALFT+RD T+ A+F LP P+S +Q + G++ AD +Q+ P VQ STP+H++GLD+YN+P S+ +R + + ++ RI RIG AFG+GG+GNTA RK L A A
Sbjct: 40 DVLSAFGASFMVSPFITIVDRSIIQNASGVMQMGDSIRAGIKELVMRPHVFLRRPEFLMIFGVYSATYTTANAVNTTCEHRKVDSAWPRFLSTSAVNMTSCIAKDRAFTRMFGSSAPMA-LPLSTYALFTIRDAGTVGASFNLPGPVSEWLQAQ-GMSKARADFTAQMACPAAVQFLSTPLHLIGLDLYNNPKSTARDRWTFMCSKYTSSVAARIGRIGPAFGIGGVGNTAFRKGLRARFA 278
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: A0A8K1CT18_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT18_PYTOL) HSP 1 Score: 206 bits (525), Expect = 2.970e-56 Identity = 114/245 (46.53%), Postives = 160/245 (65.31%), Query Frame = 2
Query: 848 RLLGDFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGWADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIRKHLHAAVA 1582
RL D AAA AS+ VSPFI+I DRA+I++ASG+ + + V+Q L P FL R +F FGL+ TY +AN+I T+ + P+F GTTAVNM I KD+A T++FG + AA P+AS LF +RD T+AA+F P M+ ++QE+ V + +ISQLV P VQ STP+H++GLD+YNH G+SMS+R+ VQ+ + ++ RIARIG AFG+GG+GNT R+ L A++
Sbjct: 19 RLGVDVAAAATASLGVSPFIAIVDRAIIENASGARRLSDGVKQLSMEFLRHPLRFLHRREFRLVFGLYTATYASANSIETLCDATDTDNQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASVGLFAIRDSMTVAASFNAPKIMAQQLQEKAHVKPSTSATISQLVCPAAVQFVSTPLHLVGLDLYNHKGASMSQRLVFVQREYIKSVFARIARIGPAFGIGGVGNTYCRQRLRTALS 262
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: A0A5D6XW10_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XW10_9STRA) HSP 1 Score: 193 bits (491), Expect = 1.240e-51 Identity = 105/249 (42.17%), Postives = 156/249 (62.65%), Query Frame = 2
Query: 833 GRVAARLLGDFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGWADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIRKHLHAAV 1579
G + RL D TAAA AS V+PFI+I DRA+I++ASG+ + +R+ R +P F+ +F FGL+ TY +ANA ++ +R P+F TTAVNM I KD+A ++FG V +A P+A+ LF VRD T+AA+F P ++ K+Q++ GV+ A + +QL+ P LVQ STP+H+LGLD+YNH G+ + ++VV++ + + RI RIG AFG+GG+GN R+ L AA+
Sbjct: 18 GLLTRRLAADVTAAATASFAVAPFITIVDRAIIENASGARPLGVGIRELARAFARRPLAFVRTREFAIVFGLYTATYASANATDSLCDFAERDSQMPKFAATTAVNMSLCIAKDRAFAQMFGVVAPSA-FPLAAVGLFAVRDSLTVAASFNAPKAVARKLQDDTGVDPARARTAAQLLCPALVQFVSTPLHLLGLDLYNHKGAGAAAHLRVVRREYLKSAIARIGRIGPAFGIGGIGNAHCRETLRAAL 265
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: A0A662XCZ4_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XCZ4_9STRA) HSP 1 Score: 191 bits (486), Expect = 4.830e-51 Identity = 105/248 (42.34%), Postives = 156/248 (62.90%), Query Frame = 2
Query: 839 VAARLLGDFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGWADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIRKHLHAAVA 1582
+A RL D AA AS+ V+PFI+I DRA+I++ASG+ + ++Q + P F+ + +FL FGL+ TY++ANAI T+ ++ + P+F GTTAVNM I KD+A ++FG + AA P+AS LF VRD T+AA+F P ++ K++++ + A +I+QLV P VQ STP+H+LGLD+YN+ G S ++R VQ+ + ++ RI RIG AFG+GG+GNT R L A
Sbjct: 16 LAKRLGIDLAAAMAASVSVAPFITIVDRAIIENASGARPLGVGLKQLAADFVRHPLRFVVKREFLLIFGLYSATYVSANAIDTMCEFAEKDNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLASIGLFAVRDSLTVAASFNAPKFLAKKLEDDAKMQPSRAGTIAQLVCPAAVQFISTPLHLLGLDLYNNKGLSAAKRASFVQREYLKSVFARIGRIGPAFGIGGVGNTYFRDQLRTTFA 262
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: K3WSU5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSU5_GLOUD) HSP 1 Score: 189 bits (480), Expect = 3.160e-50 Identity = 101/245 (41.22%), Postives = 155/245 (63.27%), Query Frame = 2
Query: 839 VAARLLGDFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGWADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIRKHLHA 1573
VA L D AAA AS VSPFI+I DRA+I++ASG+ + +++ + + P F+ + +F+ FGL+ TY +ANAI T+ + + P+F GTTAVNM I KD+A ++FG V +A P+ + LF +RD T+ A+F P ++ K++ + GV A +++QL+ P VQ STP+H+LGLD+YN+ G+S++ R + VQ+ + + RI RIG AFG+GG+GNT R++L A
Sbjct: 17 VAKNLAIDLAAAAAASFAVSPFITIVDRAIIENASGARPLAVGIKELSKAFVANPFQFVRKREFIIVFGLYTSTYASANAIDTVCEWAEADNQMPKFLGTTAVNMTLCIAKDRAFAQMFGVVAPSA-FPIGAIGLFAIRDSLTVGASFNAPKTVAKKLEVDGGVEPSRAKTLAQLLCPAAVQFVSTPLHLLGLDLYNNKGASVAARFRFVQREYLKSAVARIGRIGPAFGIGGVGNTYCRENLRA 260
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: A0A2D4BK36_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BK36_PYTIN) HSP 1 Score: 189 bits (480), Expect = 3.260e-50 Identity = 105/248 (42.34%), Postives = 158/248 (63.71%), Query Frame = 2
Query: 839 VAARLLG-DFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGWADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIRKHLHAAV 1579
+AA+ LG D AA +AS+ VSPFI+I DR++I++ASG+ + +++ L P FL R +F FGL+ TY +ANAI T+ + P+F GTTAVNM I KD+A T++FG + AA P+AS LF VRD T+AA+F P ++ +++E + A +++QL+ P +VQ STP+H+LGLD+YNH + + +R+ VQ+ + + RI RIG AFG+GG+GNT R+ L A++
Sbjct: 16 LAAKRLGVDAAAAMIASLGVSPFITIVDRSIIENASGARQLTTGLKELSIDFLRHPLQFLRRREFRLVFGLYTATYASANAIDTLCDVTDTNSQMPKFVGTTAVNMTLCIAKDRAFTQMFGVIAPAA-FPLASIGLFAVRDALTVAASFNAPRVVAKELRERAQLEPSRASTVAQLLCPAVVQFVSTPLHLLGLDLYNHRTAMVRQRINFVQREYLKSAVARIGRIGPAFGVGGVGNTFCRERLRASL 262
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: A0A433PI02_9FUNG (Uncharacterized protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PI02_9FUNG) HSP 1 Score: 186 bits (473), Expect = 1.210e-48 Identity = 102/237 (43.04%), Postives = 149/237 (62.87%), Query Frame = 2
Query: 860 DFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGW----ADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIR 1558
D AA LAS +VSPFI+I DR++I++A+G + +RQGL+ ++ +P F+ P F GL+ TYL ANA++T ++R+ + P+F TT VNM I KD+A T++FG + A +P+A++ LF RD T+AA+F P +SA + L + W AD ++QL P VQ STPVH+LGLD+YN PG S +R+ +V + + + RIARIG AFG+GG+GN R
Sbjct: 48 DAAAAFLASFLVSPFITIVDRSIIENANGKTPLATGLRQGLQHLVIRPHRFVVTPQFRLILGLYFSTYLTANAVTTTCEHLERNASAPKFVSTTLVNMSFCIYKDRAFTRMFG-LTAARPLPLATYGLFASRDALTVAASFNAPEVVSATL---LRYGAVWDKRSADVVAQLACPAAVQFLSTPVHLLGLDLYNRPGVSAGQRITLVGREYFKSAIARIARIGPAFGIGGIGNAGFR 280
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Match: G4ZUB7_PHYSP (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZUB7_PHYSP) HSP 1 Score: 183 bits (465), Expect = 3.320e-48 Identity = 97/245 (39.59%), Postives = 151/245 (61.63%), Query Frame = 2
Query: 839 VAARLLGDFTAAALASMMVSPFISIADRAVIQSASGSMTMENSVRQGLRVMLTKPKLFLARPDFLFTFGLFGGTYLAANAISTIASEIKRSDTWPRFFGTTAVNMPGSIIKDQALTKIFGAVGGAASVPMASFALFTVRDLATMAAAFTLPTPMSAKMQEELGVNSGWADSISQLVSPGLVQVFSTPVHILGLDMYNHPGSSMSERVKVVQKSFAPAIGLRIARIGVAFGLGGLGNTAIRKHLHA 1573
+A +L+ D AA AS+ V+PFI+I DRA+I++ASG+ + +++ L P F+ + +F FGL+ TY+ AN + ++ + + P+F GTTAVNM I KD+A ++FG + AA P+ S LF VRD T A+F P ++ K+++ + G A + +QLV P VQ STP+H++GLD+YN+ G +M++RV VQ+ + ++ R+ RIG AFG+GG+GNT R L A
Sbjct: 18 LAKQLVADTVAAMAASLGVAPFITIVDRAIIENASGARPLGRGLKELSVEFLKHPLRFVGKREFHLIFGLYTATYVTANVVDSVCEYAEADNQMPKFIGTTAVNMSLCIAKDRAFARMFGVIAPAA-FPLTSIGLFAVRDSMTCGASFNAPKVLAKKIEDNGLMEKGNASTFAQLVCPAAVQFLSTPLHLMGLDLYNNKGHAMAQRVSFVQREYVKSVFARVGRIGPAFGIGGVGNTYFRNSLRA 261 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2730.7474.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2730.7474.1 >prot_H-paniculata_contig2730.7474.1 ID=prot_H-paniculata_contig2730.7474.1|Name=mRNA_H-paniculata_contig2730.7474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=370bp MLRSMFARNSNQGRRVSALRLPCLLLVLLLDFHGAASTFAMPRVRRCLQSback to top mRNA from alignment at H-paniculata_contig2730:1924..10159- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2730.7474.1 ID=mRNA_H-paniculata_contig2730.7474.1|Name=mRNA_H-paniculata_contig2730.7474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8236bp|location=Sequence derived from alignment at H-paniculata_contig2730:1924..10159- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2730:1924..10159- >mRNA_H-paniculata_contig2730.7474.1 ID=mRNA_H-paniculata_contig2730.7474.1|Name=mRNA_H-paniculata_contig2730.7474.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2220bp|location=Sequence derived from alignment at H-paniculata_contig2730:1924..10159- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |