prot_H-paniculata_contig273.7473.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig273.7473.1
Unique Nameprot_H-paniculata_contig273.7473.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length556
Homology
BLAST of mRNA_H-paniculata_contig273.7473.1 vs. uniprot
Match: D7FNK0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNK0_ECTSI)

HSP 1 Score: 399 bits (1024), Expect = 4.850e-123
Identity = 367/581 (63.17%), Postives = 436/581 (75.04%), Query Frame = 0
Query:    1 KPAWVEDPYVFRVKKWIRAAGRKRDHERVVMYLRKFQDGRTLKGKSVAVHVYNAALKALDECHRWQLALTVFREMQAAGVAADRNSYFFTISACSRRGEARTALQLLSEMTA-------------------AHARLE----APAPDLLLYGVAVKACAHGRAWRQALRLVEDMSAVGVKPNIVVLNTALSACAKCGQTTRATDLLRDMEEMHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVLSLMRRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFKELSNSSDTSLVXXXXXXXXXXXXXXXXXXXXXXXXXXXEMKALELRPDVVTYSTVIRACERALPPQPDVALRLLSHMETAGVKPNNTTFVSVLLSLGRAGRCLECLEVLKGMSARGTPPDAVSCQTVLRVLDRWDRPKEAFRLFKRMQD--KGLATRPEVAEEAYCCGIRALERLGRWSSAVSLLEEWRKTDAAIRGATADPGKDAKYDQWYRALNLLAMGGSPGEFDPKTAR 556
            +P+WV+DP   RVK W+R+A  K DH RV MYLRK+++ + LKG+   + +YN AL+ALD C +W+LAL+VFREMQ+ GV  DR+SYFF +SACS+RGEA+TAL LL+EM A                    +  +E    APAPDLLLY V +KACA G+ W+QA+RL++DMSA GV PN+VV+NTALSACAKCGQ +RAT LL++M+E + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AVL ++RR+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXF EL  S D SL XXXXXXXXXXX                E KA  LR       T+IRACER++P QPDVAL+L+S ME  GV+PNNTT+V V +SLGR+ R LECL++L+ M  +GTPPDA+    VL+VLDRWD  +EA  LF+ M +  + +A  P +AEE YCCGIRALERLG+WS AV+LL++WR+        + D   D  YDQWYRAL LL+ GG P E D KT+R
Sbjct:  118 EPSWVQDPGESRVKMWMRSAASKGDHNRVAMYLRKYREAKVLKGELPRIALYNTALRALDRCKKWRLALSVFREMQSDGVDPDRDSYFFVMSACSKRGEAKTALALLAEMKARXXXXXXXXXXXXXXXXPGGYGEVEDEDGAPAPDLLLYAVVMKACAWGKRWQQAIRLLDDMSAAGVAPNVVVVNTALSACAKCGQVSRATQLLQEMQEKYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLGMLRRKGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDELVASGDESLRXXXXXXXXXXXVFSDAGMLPRALELLEEAKAKRLRXXXXXXXTLIRACERSMPSQPDVALKLVSDMEAEGVRPNNTTYVGVAISLGRSARPLECLDLLRSMHGKGTPPDAICYLAVLKVLDRWDLAEEASLLFEEMVETIEQIALMPAIAEETYCCGIRALERLGKWSEAVALLDQWRQK------GSYDADNDRMYDQWYRALRLLSTGGLPEETDVKTSR 692          
BLAST of mRNA_H-paniculata_contig273.7473.1 vs. uniprot
Match: A0A452XFJ6_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452XFJ6_AEGTS)

HSP 1 Score: 60.1 bits (144), Expect = 4.840e-6
Identity = 39/140 (27.86%), Postives = 64/140 (45.71%), Query Frame = 0
Query:   50 HVYNAALKALDECHRWQLALTVFREMQAAGVAADRNSYFFTISACSRRGEARTALQLLSEMTAAH----ARLEAPAPDLLLYGVAVKACAHGRAWRQALRLVEDMSAVGVKPNIVVLNTALSACAKCGQTTRATDLLRDM 185
            HV+N+ + A    H      +V++ MQ  GV  D  SY   +  C    E  TA ++  EM         +L     D+  Y   +K  A  + W+ A  + +DM AVG + N+V  ++ ++A A  G    A ++L +M
Sbjct:   17 HVFNSLMNA--NAHSMSYNFSVYKHMQKLGVRPDLASYNILLKTCCNAREFNTAQEIYEEMKKKEHDGILKL-----DVFTYSTMMKVFAEAKMWKMASNIKDDMRAVGARLNLVTWSSLINAYANSGLVDGAIEILEEM 149          
BLAST of mRNA_H-paniculata_contig273.7473.1 vs. uniprot
Match: A0A813HZR6_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HZR6_POLGL)

HSP 1 Score: 58.5 bits (140), Expect = 2.050e-5
Identity = 50/165 (30.30%), Postives = 73/165 (44.24%), Query Frame = 0
Query:   59 LDECHR---WQLALTVFREMQAA-GVAADRNSYFFTISACSRRGEARTALQLLSEMTAAHARLEAPAP-------------------------------DLLLYGVAVKACAHGRA-WRQALRLVEDMSAVG--VKPNIVVLNTALSACAKCGQTTRATDLLRDM 185
            +  C R   WQ AL +  +M A   V A   SY   ++ACSR G+ + AL+LL    A H +L + AP                               D  +YG A+ AC  G   W +AL L+  +S     +  N+++ N+A+SAC K G+   A +LL  M
Sbjct:   48 ISSCRRSDGWQQALGILAQMPACYSVQASLASYNAAMAACSRAGQWQVALELLQ---AVHEKLGSLAPSAXXXXXXXXXXXXXXXXXXXXXXLFGFSDPDEFMYGAAISACEKGGGQWDKALGLLSHLSMASRRIPLNVIIHNSAISACEKAGRWRCALELLHGM 209          
BLAST of mRNA_H-paniculata_contig273.7473.1 vs. uniprot
Match: A0A812USN0_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812USN0_9DINO)

HSP 1 Score: 58.5 bits (140), Expect = 2.750e-5
Identity = 38/103 (36.89%), Postives = 53/103 (51.46%), Query Frame = 0
Query:   53 NAALKALDECHRWQLALTVF----REMQAAGVAADRNSYFFTISACSRRGEARTALQLLSEMTAAHARLEAPAPDLLLYGVAVKACAHGRAWRQALRLVEDMS 151
            NAAL AL  CHRWQLAL +     RE++A     +  SY   I+AC+R        +L  E+      L    PDL+ Y  A+ A A    W+QA+ L ++M+
Sbjct:   69 NAALSALGNCHRWQLALRLLGGASRELRA-----EVQSYSICITACTRAAAPTMGRELFDELKLQRQLL----PDLVAYAAAISAEASAGHWQQAMALFQEMT 162          
BLAST of mRNA_H-paniculata_contig273.7473.1 vs. uniprot
Match: A0A813K801_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K801_POLGL)

HSP 1 Score: 58.5 bits (140), Expect = 3.250e-5
Identity = 50/165 (30.30%), Postives = 73/165 (44.24%), Query Frame = 0
Query:   59 LDECHR---WQLALTVFREMQAA-GVAADRNSYFFTISACSRRGEARTALQLLSEMTAAHARLEAPAP-------------------------------DLLLYGVAVKACAHGRA-WRQALRLVEDMSAVG--VKPNIVVLNTALSACAKCGQTTRATDLLRDM 185
            +  C R   WQ AL +  +M A   V A   SY   ++ACSR G+ + AL+LL    A H +L + AP                               D  +YG A+ AC  G   W +AL L+  +S     +  N+++ N+A+SAC K G+   A +LL  M
Sbjct:  508 ISSCRRSDGWQQALGILAQMPACYSVQASLASYNAAMAACSRAGQWQVALELLQ---AVHEKLGSLAPSAXXXXXXXXXXXXXXXXXXXXXXLFGFSDPDEFMYGAAISACEKGGGQWDKALGLLSHLSMASRRIPLNVIIHNSAISACEKAGRWRCALELLHGM 669          
BLAST of mRNA_H-paniculata_contig273.7473.1 vs. uniprot
Match: D7FTF0_ECTSI (PPR_long domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTF0_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 3.770e-5
Identity = 35/108 (32.41%), Postives = 56/108 (51.85%), Query Frame = 0
Query:   51 VYNAALKALDECHRWQLALTVFREMQAAGVAADRNSYFFTISACSRRGEARTALQLLSEMTAAHARLEAPAPDLLLYGVAVKACAHGRAWRQALRLVEDMSAVGVKPN 158
            V+ AA++A  +  + +  L     M+A G   + + Y   IS C R+G    A+ LL +     +  +    D++ +  AV AC  G  WRQAL L+E+M A G+KP+
Sbjct:   69 VHTAAIRAALDGGKARPVLATIAAMRADGFVPNISLYNKAISLCGRQGAWEDAVFLLRDAQRVSSPGQRRGVDVVTFSAAVAACRDGGEWRQALALMEEMQAAGIKPD 176          
BLAST of mRNA_H-paniculata_contig273.7473.1 vs. uniprot
Match: A0A6A3CXC7_HIBSY (Uncharacterized protein n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3CXC7_HIBSY)

HSP 1 Score: 53.1 bits (126), Expect = 6.230e-5
Identity = 32/80 (40.00%), Postives = 44/80 (55.00%), Query Frame = 0
Query:  365 MKALELRPDVVTYSTVIRACERALPPQPDVALRLLSHMETAGVKPNNTTFVSVLLSLGRAGRCLECLEVLKGMSARGTPP 444
            MKA  L P V++Y+T+I+        Q DV LRL   M+  G+KPN TT+ ++L  L  AG+  E   +LK M  R   P
Sbjct:    1 MKAKNLTPTVISYTTMIKGYVAV--GQVDVGLRLFEEMKCFGIKPNATTYSTILPGLCDAGKTNEAKTILKEMLERYVAP 78          
BLAST of mRNA_H-paniculata_contig273.7473.1 vs. uniprot
Match: A0A812Q5L8_9DINO (Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812Q5L8_9DINO)

HSP 1 Score: 57.0 bits (136), Expect = 6.690e-5
Identity = 35/120 (29.17%), Postives = 60/120 (50.00%), Query Frame = 0
Query:   52 YNAALKALDECHRWQLALTVFREMQAAGVAADRNSYFFTISACSRRGEARTALQLLSEMTAAHARLEAPAPDLLLYGVAVKACAHGRAWRQALRLVEDMSAVGVKPNIVVLNTALSACAK 171
            YNAA++A +    WQ+A+++F EM    +A D+ +      A +  G+ + A   LS +     + EA     + Y   V AC+  + W+ AL  +   S+ G   N + +N A+SAC +
Sbjct:  316 YNAAIRACERAGMWQVAVSLFEEMDVRRLAPDQFTGSTVAPALAASGKRQAASHFLSRLEEQSVQHEA-----IAYSGMVNACSKMQEWQPALAWLLSASSKGFCSNAIAVNAAVSACCE 430          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig273.7473.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FNK0_ECTSI4.850e-12363.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A452XFJ6_AEGTS4.840e-627.86Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]
A0A813HZR6_POLGL2.050e-530.30Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A812USN0_9DINO2.750e-536.89Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
A0A813K801_POLGL3.250e-530.30Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
D7FTF0_ECTSI3.770e-532.41PPR_long domain-containing protein n=1 Tax=Ectocar... [more]
A0A6A3CXC7_HIBSY6.230e-540.00Uncharacterized protein n=1 Tax=Hibiscus syriacus ... [more]
A0A812Q5L8_9DINO6.690e-529.17Hypothetical protein n=1 Tax=Symbiodinium sp. CCMP... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 161..195
e-value: 3.8E-4
score: 18.5
coord: 267..300
e-value: 4.7E-5
score: 21.3
coord: 340..374
e-value: 1.3E-7
score: 29.3
coord: 303..329
e-value: 1.1E-5
score: 23.2
coord: 196..230
e-value: 3.3E-7
score: 28.1
coord: 232..266
e-value: 1.1E-6
score: 26.5
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 458..477
e-value: 0.083
score: 13.2
coord: 91..111
e-value: 0.67
score: 10.3
coord: 413..441
e-value: 0.22
score: 11.8
coord: 160..188
e-value: 0.018
score: 15.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 254..312
e-value: 1.3E-11
score: 44.4
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 337..384
e-value: 1.5E-13
score: 50.7
coord: 193..242
e-value: 9.4E-13
score: 48.1
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 338..372
score: 12.474
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 83..117
score: 7.53
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 410..444
score: 8.955
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 230..264
score: 10.654
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 194..229
score: 10.665
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 123..157
score: 9.295
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 48..82
score: 8.868
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 300..334
score: 10.271
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 484..518
score: 6.478
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 445..479
score: 9.361
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 158..188
score: 8.374
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 265..299
score: 11.575
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 373..409
score: 10.008
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 117..204
e-value: 4.8E-22
score: 80.2
coord: 422..522
e-value: 9.2E-12
score: 46.6
coord: 312..421
e-value: 3.1E-30
score: 106.9
coord: 205..311
e-value: 9.5E-36
score: 124.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 13..116
e-value: 8.3E-12
score: 47.1
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 195..515
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 20..186
coord: 161..328
coord: 263..384
coord: 391..512

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig273contigH-paniculata_contig273:26427..42417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig273.7473.1mRNA_H-paniculata_contig273.7473.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig273 26427..42417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig273.7473.1 ID=prot_H-paniculata_contig273.7473.1|Name=mRNA_H-paniculata_contig273.7473.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=556bp
KPAWVEDPYVFRVKKWIRAAGRKRDHERVVMYLRKFQDGRTLKGKSVAVH
VYNAALKALDECHRWQLALTVFREMQAAGVAADRNSYFFTISACSRRGEA
RTALQLLSEMTAAHARLEAPAPDLLLYGVAVKACAHGRAWRQALRLVEDM
SAVGVKPNIVVLNTALSACAKCGQTTRATDLLRDMEEMHGVTPDAVSYNC
VINAYERTGEWREALALYRTMEKVKGVSPTVCTFNSVIGACKTAKRPTEA
LAVLSLMRRRGLKPDVISFNSAISACARKGVWKTALQLLETMPGEGVQPN
LTTYNAALDACAKSGQWEMALSLFKELSNSSDTSLVPDLYTYNTVMTVYS
RSGMLARALELLEEMKALELRPDVVTYSTVIRACERALPPQPDVALRLLS
HMETAGVKPNNTTFVSVLLSLGRAGRCLECLEVLKGMSARGTPPDAVSCQ
TVLRVLDRWDRPKEAFRLFKRMQDKGLATRPEVAEEAYCCGIRALERLGR
WSSAVSLLEEWRKTDAAIRGATADPGKDAKYDQWYRALNLLAMGGSPGEF
DPKTAR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf