mRNA_H-paniculata_contig273.7472.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig273.7472.1
Unique NamemRNA_H-paniculata_contig273.7472.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: D7FNP7_ECTSI (Caffeate O-Methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNP7_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 4.750e-155
Identity = 229/329 (69.60%), Postives = 264/329 (80.24%), Query Frame = 1
Query:   67 MNRKEQVLALCEKVQRDLKLAGLVGDGAASDGTLYSNIAEMWSAQLGLGRPGAPPPIGTRGNKEEGEEEAADGT-----EIDDVDATLK-QSPPPAPHAAPAA--GAGSAQWYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRTECLCIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNVVPVGGEEGAFIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEGFPGEIFPVYMFALE 1029
            M+RK+QVL LC+KV RDLKLAGL  DG A+DGT +S+IA MWS++LG G   A P  G       GE   A GT     +I D  A  + QS  PA   +     G G+ QWYERAYDYWEDG+NC +DDDGVLGGYGHISPTDI+GSA+FLD +K MRPLLGDE AADCGAGIGR+TKHLLLDRFD+VDIVEQSPRL++AAPKYVG++RDRT C+C+GLQDFFP ED YDL WIQWVVGHFTDVDL+KL+ RCR AL+KGGL+V+KDNV+  G  EGAF VD EDSSMTRSLGYFRSLFNHGG++VVHQ RQ+GFPGE+FPVYMFALE
Sbjct:    1 MSRKQQVLELCDKVHRDLKLAGLPTDGCATDGTEHSSIAAMWSSELGFGPMQALPAGG-------GE---ATGTTTPPEKIGDKSAKARPQSTKPASSNSTGGDGGGGAVQWYERAYDYWEDGDNCPVDDDGVLGGYGHISPTDIAGSAAFLDELKRMRPLLGDETAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLIQAAPKYVGRDRDRTTCVCVGLQDFFPPEDSYDLVWIQWVVGHFTDVDLLKLLARCRSALRKGGLIVVKDNVIGQG--EGAFKVDSEDSSMTRSLGYFRSLFNHGGVRVVHQTRQDGFPGELFPVYMFALE 317          
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: A0A1V9YYT0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYT0_9STRA)

HSP 1 Score: 246 bits (628), Expect = 4.990e-76
Identity = 114/220 (51.82%), Postives = 154/220 (70.00%), Query Frame = 1
Query:  370 AQWYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRT-ECLCIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNVVPVGGEEGAFIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEGFPGEIFPVYMFAL 1026
            A WY +  DYWED  NC  D  GVLGGYG+ISP DI GS SFLD ++++RP      A DCG GIGR+ KHLLL  F +VD++EQSPRLL+AAP+Y+G+++ R  + LC+G+QDF PA   YDL W QWV  H  DVD I  + RC+ AL+ GG++ IK+N++  G     + VD EDSS+TRS  Y++S+F   G+K++ ++RQ GFP E++PV  +AL
Sbjct:   52 AAWYTQGADYWEDEVNCPPDVGGVLGGYGYISPVDIEGSLSFLDRVQALRPEFTRSHAIDCGGGIGRVVKHLLLPHFQTVDLLEQSPRLLKAAPRYIGKDKSRVRQLLCMGMQDFDPAPMSYDLIWCQWVCPHLMDVDFITFLQRCQRALRPGGVICIKENIIVDG---SPYEVDEEDSSLTRSTAYYKSIFRQAGLKILTEERQTGFPEELYPVMSYAL 268          
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: A0A836CCK3_9STRA (AdoMet dependent proline di-methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCK3_9STRA)

HSP 1 Score: 245 bits (625), Expect = 9.570e-76
Identity = 125/238 (52.52%), Postives = 160/238 (67.23%), Query Frame = 1
Query:  379 YERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRTECLCIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNV--------VPVG------------GEEGAFIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEG-FPGEIFPVYMFALE 1029
            + +AYDYWE   +     +GVLGGYG +SP DI+GS  FL  +KS+RP LG E+AADCGAGIGRIT+  LL  FD+VD+VEQSP+LL AAP+++G  RD  E +C+GLQDF P  D YD+ W+QWVVGH TDVD +K + RCR AL+  G++V+KDN          P G            G   AF++D +DSS+ RS+ YFRSLF H  + VV Q+R+   FP EIFPV+ FALE
Sbjct:   23 FPKAYDYWEASPST---IEGVLGGYGELSPIDIAGSTKFLAELKSLRPGLGCERAADCGAGIGRITRDFLLQHFDAVDMVEQSPKLLEAAPRFLGPLRDCVEYICMGLQDFCPPADTYDVIWVQWVVGHLTDVDFVKFLRRCRQALRPHGVLVLKDNCCSCDGSADAPDGTDNSCEDSGGNAGASSAFVLDSDDSSVARSVAYFRSLFKHADMDVVLQRREASIFPEEIFPVFYFALE 257          
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: A0A067BRJ5_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BRJ5_SAPPC)

HSP 1 Score: 243 bits (620), Expect = 7.930e-75
Identity = 112/220 (50.91%), Postives = 155/220 (70.45%), Query Frame = 1
Query:  370 AQWYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRTECL-CIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNVVPVGGEEGAFIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEGFPGEIFPVYMFAL 1026
            A WY +  DYWED ENC  D  GVLGGYG+ISP DI GS +FL  ++++RP    ++A DCG GIGR+ KHLLL  F SVD++EQSPRLL+AAP+Y+G E+ R E L C+G+QDF P+ + YDL W QWV  H  D+D IK + RC+ AL+ GG++ IK+N++  G     + +D +DSS+TRS  Y++S+F    + ++  +RQEGFP E++PV  +AL
Sbjct:   52 AAWYTQGADYWEDEENCPPDVGGVLGGYGYISPIDIEGSTAFLARVQALRPAFKRDRAIDCGGGIGRVVKHLLLPLFASVDLLEQSPRLLKAAPRYIGAEKHRVETLLCMGMQDFDPSPNSYDLIWCQWVCPHLMDLDFIKFLQRCQQALRPGGVICIKENIIVDG---SPYELDEDDSSVTRSAAYYKSIFRQANLTLLADERQEGFPEELYPVMTYAL 268          
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: K3X303_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X303_GLOUD)

HSP 1 Score: 234 bits (598), Expect = 4.440e-71
Identity = 111/221 (50.23%), Postives = 151/221 (68.33%), Query Frame = 1
Query:  376 WYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRTECL----CIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNVVPVGGEEGAFIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEGFPGEIFPVYMFAL 1026
            WY  A+D+WED +NC + D+GVLGG+ H+SP DI GS  FL  ++ +RP    + A DCGAGIGR++K LLL  F  VD+VEQSPRLL++ P+YVG+    T+ +    C+GLQDF+P E KYDL WIQWV  H TDVD +  + RC+ AL   G + +K+NVV  G     F +D EDSS+TRS  Y++SLF   G+ ++ ++ Q+ FP E++PV MFAL
Sbjct:   84 WYSSAHDFWEDEKNCPVTDNGVLGGFAHVSPVDIKGSERFLARVQKLRPGWERQLAVDCGAGIGRVSKFLLLPTFKQVDLVEQSPRLLQSVPQYVGRTSSDTKRIRNLYCMGLQDFYPEEQKYDLIWIQWVSSHLTDVDFVHFLKRCKQALAPNGWIGVKENVVLSG---TPFELDREDSSITRSAAYYKSLFKQAGLTIIVEELQQHFPRELYPVKMFAL 301          
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: A0A485KWK6_9STRA (Aste57867_12822 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWK6_9STRA)

HSP 1 Score: 232 bits (591), Expect = 3.640e-70
Identity = 110/221 (49.77%), Postives = 147/221 (66.52%), Query Frame = 1
Query:  370 AQWYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRTECL-CIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNVVPVGGEEGA-FIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEGFPGEIFPVYMFAL 1026
            A WY    DYWE  ENC   D GVLGGYGHISP D+ GSA+FLD ++  RP +    A DCG G+GR+ K+LLL R+ +VD +EQS RLL AAP Y+G E+ R   L C+G+QDF P    YDL W QWV+GH TDVD +  + RC+ AL  GG++ IK+N +     EG  + VD +DSS+ RS  Y++S+F   G+ ++ ++RQ GFP E++PV  +AL
Sbjct:   75 ATWYTSGADYWEAEENCPPTDMGVLGGYGHISPIDVEGSAAFLDRLQKSRPTMQQNLAIDCGCGVGRVVKNLLLPRYTAVDCLEQSQRLLAAAPSYIGAEKARVRNLYCMGMQDFEPVARSYDLIWCQWVLGHLTDVDFVAFLKRCQAALAPGGVICIKENAI----NEGVPYYVDKDDSSLGRSSAYYKSIFRQAGLTLLAEERQCGFPEELYPVITYAL 291          
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: A0A6G0WSU0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSU0_9STRA)

HSP 1 Score: 231 bits (589), Expect = 3.650e-70
Identity = 107/221 (48.42%), Postives = 150/221 (67.87%), Query Frame = 1
Query:  370 AQWYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRTECL-CIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNVVPVGGEEGA-FIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEGFPGEIFPVYMFAL 1026
            A WY    +YWE+ ENC  +D GVLGGYGHISP D+ GS++FLD+I+++RP +    A DCG G+GR+  +LLL R+ +VD +EQS RLL+  P YVG E+ R   L C+G+QDF P    YDL W QWV+GH TDVD +  + RC+ AL  GG++ IK+N +     EG  + VD +DSS+ RS  Y++S+F   G+ ++ + +QEGFP E++PV  +AL
Sbjct:   53 AVWYTSGAEYWENEENCPPNDQGVLGGYGHISPVDVEGSSAFLDHIQTLRPAMQRNLAIDCGCGVGRVVNNLLLPRYTAVDCLEQSQRLLQTIPSYVGPEKARIRNLYCMGMQDFDPKPGSYDLIWCQWVLGHLTDVDFVAFLKRCQAALAPGGVICIKENAI----NEGVPYYVDKDDSSLGRSSVYYKSIFRQAGLTLLAETKQEGFPDELYPVITYAL 269          
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: A0A8K1CPE5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPE5_PYTOL)

HSP 1 Score: 226 bits (576), Expect = 8.670e-68
Identity = 111/232 (47.84%), Postives = 147/232 (63.36%), Query Frame = 1
Query:  352 AAGAGSAQWYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRTECL-------CIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNVVPVGGEEGAFIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEGFPGEIFPVYMFAL 1026
            A+GA  A WY  A DYW+D E C LDD+GVLGG+ HISP D+  S  F+  +   RP    +   DCGAGIGR+TK+LLL  F  VD++EQS RLLR  P+Y+G  RD    L       C+GLQDF PA   YDL WIQWV  H TDVD +  + RC+  L   G + +K+NV+  G     + +D +DSSMTRS  YF+S+F   G++V+ ++ Q+ FP E++PV M+AL
Sbjct:   75 ASGAKQAVWYSSANDYWQDEEKCSLDDNGVLGGFAHISPADVHDSKEFIYKLALKRPQWKRDVVVDCGAGIGRVTKNLLLPLFQRVDLIEQSERLLRGVPQYIG--RDDAAALSRVRNLYCMGLQDFTPASRSYDLVWIQWVSSHLTDVDFVDFLKRCKAGLAPHGWIAVKENVLLAG---SPYEIDRQDSSMTRSDVYFKSIFRQAGLEVIAEETQKNFPEELYPVKMYAL 301          
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: A0A1W0A7R8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A7R8_9STRA)

HSP 1 Score: 239 bits (610), Expect = 1.390e-67
Identity = 111/215 (51.63%), Postives = 150/215 (69.77%), Query Frame = 1
Query:  370 AQWYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRT-ECLCIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNVVPVGGEEGAFIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEGFPGEIFPV 1011
            A WY +  DYWED  NC  D  GVLGGYG+IS  DI GS SFL  ++S+RP L  E A DCG GIGR+ KHLLL +F +VD++EQSPRLL+AAPKY+G E  R  E +C+G+QDF P+   YDL W QWV  H TD+D I  + +C+ +L+ GG++ IK+N +  G     F VD EDSS+TRS  Y++S+F   G+ +++++RQ GFP E++P+
Sbjct:   29 AAWYSQGADYWEDEVNCPSDVGGVLGGYGYISQVDIEGSISFLKRVQSIRPELKHEYAIDCGGGIGRVVKHLLLLQFQTVDLLEQSPRLLKAAPKYIGDENHRVREYICLGMQDFNPSPKSYDLIWCQWVCPHLTDIDFIDYLTKCQLSLRDGGVICIKENTIADG---SPFEVDEEDSSLTRSAAYYKSIFRQAGLTILYEERQRGFPEELYPL 240          
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Match: W4G1H4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1H4_9STRA)

HSP 1 Score: 224 bits (570), Expect = 2.810e-67
Identity = 107/226 (47.35%), Postives = 142/226 (62.83%), Query Frame = 1
Query:  361 AGSAQWYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSMRPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQERDRTEC---LCIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGALKKGGLVVIKDNVVPVGGEEGA-FIVDCEDSSMTRSLGYFRSLFNHGGIKVVHQQRQEGFPGEIFPVYMFAL 1026
            A  A WY     YWED  NC   DDGVLGGYG ISP D+ GSASFLD I+++RP +    A DCG G+GR+ KHLLL R+DSVD +EQS RLL   P Y+G+  D +      C+G+QDF P    YDL W QWV+GH TD D +  + RC+ AL   G++ IK+N +     EG  + VD +DSS+ RS  Y++S+F   G+ ++ +  Q  FP E++PV  +AL
Sbjct:   51 AAPAGWYTSGAKYWEDESNCPPTDDGVLGGYGRISPADVEGSASFLDRIQTLRPTMKRNLAIDCGCGVGRVVKHLLLPRYDSVDCLEQSQRLLNTVPSYIGRSSDTSRIRNLYCMGMQDFQPEPHAYDLIWCQWVLGHLTDSDFVAFLKRCQKALAPDGVICIKENAI----NEGVPYYVDKDDSSLGRSSVYYKSIFRQAGLTLLAETEQSDFPDELYPVITYAL 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig273.7472.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNP7_ECTSI4.750e-15569.60Caffeate O-Methyltransferase n=2 Tax=Ectocarpus Ta... [more]
A0A1V9YYT0_9STRA4.990e-7651.82Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A836CCK3_9STRA9.570e-7652.52AdoMet dependent proline di-methyltransferase-doma... [more]
A0A067BRJ5_SAPPC7.930e-7550.91Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
K3X303_GLOUD4.440e-7150.23Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A485KWK6_9STRA3.640e-7049.77Aste57867_12822 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0WSU0_9STRA3.650e-7048.42Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1CPE5_PYTOL8.670e-6847.84Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1W0A7R8_9STRA1.390e-6751.63Uncharacterized protein (Fragment) n=1 Tax=Thraust... [more]
W4G1H4_9STRA2.810e-6747.35Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig273contigH-paniculata_contig273:19817..23396 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score452.2
Seed ortholog evalue2e-124
Seed eggNOG ortholog2880.D7FNP7
Preferred nameNTMT1
KEGG koko:K14317,ko:K16219,ko:K19579
KEGG TC1.I.1
KEGG Pathwayko03013,ko05169,map03013,map05169
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0002181,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006325,GO:0006412,GO:0006464,GO:0006479,GO:0006480,GO:0006518,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018013,GO:0018016,GO:0018193,GO:0018194,GO:0018201,GO:0018208,GO:0018209,GO:0019538,GO:0022402,GO:0031365,GO:0031974,GO:0031981,GO:0032259,GO:0034641,GO:0034645,GO:0035568,GO:0035570,GO:0035572,GO:0035573,GO:0036211,GO:0042054,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0051276,GO:0070013,GO:0071704,GO:0071840,GO:0071885,GO:0071891,GO:0140096,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.O-methyltransferase activity
EggNOG OGsKOG3178@1,KOG3178@2759
Ec32 ortholog descriptionCaffeate O-Methyltransferase
Ec32 orthologEc-01_004720.1
EC2.1.1.244,2.1.1.299
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Exons4
Model size1234
Cds size966
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig273.7472.1prot_H-paniculata_contig273.7472.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig273 20019..23330 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929823.2198188-UTR-H-paniculata_contig273:19816..200181622929823.2198188-UTR-H-paniculata_contig273:19816..20018Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig273 19817..20018 -
1691481027.0009837-UTR-H-paniculata_contig273:19816..200181691481027.0009837-UTR-H-paniculata_contig273:19816..20018Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig273 19817..20018 -
1622929823.287483-UTR-H-paniculata_contig273:23330..233961622929823.287483-UTR-H-paniculata_contig273:23330..23396Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig273 23331..23396 -
1691481027.0505848-UTR-H-paniculata_contig273:23330..233961691481027.0505848-UTR-H-paniculata_contig273:23330..23396Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig273 23331..23396 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929823.2336876-CDS-H-paniculata_contig273:20018..203451622929823.2336876-CDS-H-paniculata_contig273:20018..20345Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig273 20019..20345 -
1691481027.0141013-CDS-H-paniculata_contig273:20018..203451691481027.0141013-CDS-H-paniculata_contig273:20018..20345Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig273 20019..20345 -
1622929823.2470703-CDS-H-paniculata_contig273:20953..211111622929823.2470703-CDS-H-paniculata_contig273:20953..21111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig273 20954..21111 -
1691481027.0254662-CDS-H-paniculata_contig273:20953..211111691481027.0254662-CDS-H-paniculata_contig273:20953..21111Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig273 20954..21111 -
1622929823.2590868-CDS-H-paniculata_contig273:21539..218521622929823.2590868-CDS-H-paniculata_contig273:21539..21852Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig273 21540..21852 -
1691481027.0353472-CDS-H-paniculata_contig273:21539..218521691481027.0353472-CDS-H-paniculata_contig273:21539..21852Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig273 21540..21852 -
1622929823.271346-CDS-H-paniculata_contig273:23162..233301622929823.271346-CDS-H-paniculata_contig273:23162..23330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig273 23163..23330 -
1691481027.0430295-CDS-H-paniculata_contig273:23162..233301691481027.0430295-CDS-H-paniculata_contig273:23162..23330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig273 23163..23330 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig273.7472.1

>prot_H-paniculata_contig273.7472.1 ID=prot_H-paniculata_contig273.7472.1|Name=mRNA_H-paniculata_contig273.7472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp
MNRKEQVLALCEKVQRDLKLAGLVGDGAASDGTLYSNIAEMWSAQLGLGR
PGAPPPIGTRGNKEEGEEEAADGTEIDDVDATLKQSPPPAPHAAPAAGAG
SAQWYERAYDYWEDGENCGLDDDGVLGGYGHISPTDISGSASFLDYIKSM
RPLLGDEKAADCGAGIGRITKHLLLDRFDSVDIVEQSPRLLRAAPKYVGQ
ERDRTECLCIGLQDFFPAEDKYDLFWIQWVVGHFTDVDLIKLMNRCRGAL
KKGGLVVIKDNVVPVGGEEGAFIVDCEDSSMTRSLGYFRSLFNHGGIKVV
HQQRQEGFPGEIFPVYMFALE*
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mRNA from alignment at H-paniculata_contig273:19817..23396-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig273.7472.1 ID=mRNA_H-paniculata_contig273.7472.1|Name=mRNA_H-paniculata_contig273.7472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3580bp|location=Sequence derived from alignment at H-paniculata_contig273:19817..23396- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTGCTGCTTCGAAGCGGCCGGCTGTTGTGTGTGTACCTGCTGGCGTCT TCCGGCTAGCAAAGCCATGAATCGAAAAGAGCAAGTATTAGCTTTGTGCG AAAAAGTGCAAAGAGATTTAAAACTCGCCGGCCTAGTCGGGGACGGTGCG GCATCCGACGGTACCTTGTACTCAAACATCGCAGAGATGTGGTCAGCGCA GCTAGGCTTGGGTCGACCAGGAGCTCCGCCACCGGTGGGTGCTGTTGCCC ATGTCACGGCCGGTCTGCTTGATTGCTATGATACAGGCATAAATGCTGCA GTGCTCAATTTGGCTGGATAAGAAATAGCATGTATTGGACTACAAGTATC GTGGAATGCTTGGATGCTTGAGCACACCATGGGAACGAGCGCTTAAACTT GGCATATCACGTTGATAACAAACAACCCAGAGTTTTGGCGTCTGTCAGTG GTACAGTATCTCGCGCTTACGGTGCTCATGAATGTCGTAAACCTTCGCGG CAACCCAACCGTTGGCAGACAGGTGCATCCAAAATTTCGACGAACGCTCA ACCACCGACAAACCTACAGTGGACCATGGCCTCTGACAGCACGAAGCACG CATTTTGCCCTCGATTTGTAAGCTAGGTGCTATGCAAAATCCTGCCAACA TTATTATTTTGATCATTTTCATGACTAAACTGTAGTGACTGGAGTTGGTA TTTCAATCCGATTTGACTGTGCATAACGTACAACTAGTAGACGGCGCGTC TTTTCTACAACTAGCAGTTGCTGCCGCTGTACCAGGTTTGTGACCATGCC AAATTGCATCCACGTTTTCTCAGTGAAGGTAGTCATCTGTCAATACATGA CGCGTCCGCTAGGGGGGTCTTTATGTGGAGAACCCGGTCAAAGAGATGAC TACAATATCGGGCATGGAACCCCCTGACGCACCACTATTGGTCAGTCGAT TCCACCGCGCGGTTACGTTTTCGGTACTTGTTCGTCAGGATTTTTAATTC GAGTGAGCCCGAAATAGTCCAGCCTTATCTCCGTAACTCTTGAGAAATAA AAGCACGAAAAAGCCCCAGTCCTGTAGCCGAGGATATTTTCAAGAGAGGG AGGGAACGGAGGTAAAAGTTTTGGTCAACAGTACGCGCAGCCCGTAGTCT ATGGGTGCAGGTAGTACAATTGATAGGATTGTAGTGCTCTGGGATCAGTG ATGATGGAAGGTTGCGCATCCATTTTTGCGTATCACAACACAGTTTGTGG ACTTTCGTACAGATTTACATATTCCAACAGTCCAAGGGAACGGTGGGGGT GTCAATAATTTTCCCGTCAAGTTGAGCAGCCCTAACTTTGATGGAGATAA TCAAGAGCCAACGCTGGATCCGTGGCCTTGCGGTTAGTAATTGTCTTTTC TTGTCTGCGCCGGTATCTCCATCATTTCGTTGCCCTTAAGTACAATATGC TGGATAACGTCACCGTACATATTCTCACAGTGGGGTAGAAACTCCTGACT AGTGAAGATATAAACATCCTCGTTCCTCGTATATATTATAACAGATTGGT ACAAGAGGGAATAAGGAAGAGGGAGAGGAGGAGGCAGCTGACGGAACAGA AATTGATGACGTCGATGCTACATTGAAACAGTCACCACCGCCCGCGCCCC ACGCCGCCCCTGCCGCCGGTGCGGGCTCGGCGCAATGGTATGAACGAGCG TACGACTATTGGGAAGATGGCGAAAACTGTGGACTTGATGACGATGGCGT TCTCGGCGGCTACGGACACATTTCTCCCACAGACATATCAGGCTCGGCCT CTTTCTTGGATTATATTAAGTCCATGAGACCATTGCTCGGGGACGAAAAA GCGGCAGGTGACGTACTCTTGGGTATGGAACTTACGGAAGTTACGCCTGT ATGGTTGCCTCGACAGTGTCGGCTATGTACATGACCTGCACCACCTACCG CGCAAGTATCAGGACTAACCTTGTGATTCAACATCTTTGGGCGTGCGCGT GGGCTATTCAAACAAGATCTCTGTGCTCCAGGGTATACATGTCCTCGAAC AAGCAATAAGCCGACTTGGATGATAAGGATATATGTGCAACCTAGTTGCC GATATGCTAAGCTATCGCAGTTCTGCCTTTTCATGTACATAGTGCCCTCG GATGCTCCAGCTTAATACCCACAACGAGATGTGATAGGTTTCAGCTGCCT CTGACCTCCCCCTCTCGCCTGATTAGTCAACCTATTTTGTCTCTTCTTTC ATCCGTTTGCCCCTGAAATGGTGATGTGCAACAAGATTGTGGCGCCGGCA TTGGAAGGATAACGAAGCATCTTCTTCTTGATCGTTTTGATTCGGTCGAC ATAGTGGAACAGAGCCCACGCCTGTTAAGAGCGGCGCCGAAGTATGTGGG ACAGGAAAGAGACCGCACGGAGTGCCTATGCATAGGGCTACAGGTGAGGA TCGTTCACTTCTTTATAATTGCCCCGTGTACAGCGTTTGCCGCTGTGCAC GTGGGGTTGGAGTCGAGCGTACACATTGTTTACCCAGCTTGAATCAGCTC AAGACAGTTGGTTGGCATATCTACCTCAGGCTCAAAAGCGGGCGATTTTT TGCCGACCTGGATATTTCTCACTTGAAATTCAGCGTAGAGCGAGATCAGC TCTTTCAACATCGAGCTTTTTTCTTCCAAGACGTAGATGATGGTTTTACC CTGTGGACGTGGAAAGAACAATACGGTCGCGGAGTGAATGCCTACGCCTT TTGCTCGAGCATGCTTGTGTGTTTGAATGAATCGCTACAACACCTTTCTC CTCCGGCCGTCTTTTCTGTGATTTTGGGCTCTCGCCCCGAACGTCCGAAG ACAAATTATTTTCCGAGGATGACGTATTTCTGAAGACGTTTTGTGTACCT GATCTTAATCATGTTATATTTGACGTTGGTGTGCTTTTGTGCTGATACAT ATTTCTTCGACAAAAAAGCACACCCCAATCCCTGACCTCAGCTCCCCCCT TCCCCCCCGCATTCCCGGTTGACACCAATGGTCTTACTCAAACTGGTGCA GGATTTTTTTCCAGCCGAGGACAAGTACGATCTATTCTGGATACAGTGGG TCGTTGGTCATTTCACAGATGTGGACCTCATCAAATTGATGAACCGTTGC CGGGGGGCTCTCAAGAAAGGTGGTTTGGTAGTGATAAAGGACAACGTGGT GCCGGTGGGGGGGGAAGAGGGCGCTTTCATAGTCGATTGCGAGGACAGTA GCATGACGCGATCTCTGGGGTACTTTCGGAGTCTGTTCAATCACGGAGGA ATTAAAGTCGTGCATCAGCAACGGCAAGAGGGATTTCCCGGAGAAATTTT CCCCGTGTACATGTTCGCGTTGGAGTAGTTTGCGTGCTGAGCTGCCCTTG ATGGTGTCGCTGTGCTCGTTGTGCACAGCACAACTGTGGAGTCGCCCACT CGCGTAAATGATGGCGTCCAATGGCTGTCCTTCTACAGAAAACAATTATG TCAGTCGTTTTTTGTTGTTGCGGGTAATGGACAAGAAGAGGTACACTCAC CCTGAAAACGGCAGAAAAGGATACAATGGC
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Coding sequence (CDS) from alignment at H-paniculata_contig273:19817..23396-

>mRNA_H-paniculata_contig273.7472.1 ID=mRNA_H-paniculata_contig273.7472.1|Name=mRNA_H-paniculata_contig273.7472.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig273:19817..23396- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATCGAAAAGAGCAAGTATTAGCTTTGTGCGAAAAAGTGCAAAGAGA
TTTAAAACTCGCCGGCCTAGTCGGGGACGGTGCGGCATCCGACGGTACCT
TGTACTCAAACATCGCAGAGATGTGGTCAGCGCAGCTAGGCTTGGGTCGA
CCAGGAGCTCCGCCACCGATGAATCGAAAAGAGCAAGTATTAGCTTTGTG
CGAAAAAGTGCAAAGAGATTTAAAACTCGCCGGCCTAGTCGGGGACGGTG
CGGCATCCGACGGTACCTTGTACTCAAACATCGCAGAGATGTGGTCAGCG
CAGCTAGGCTTGGGTCGACCAGGAGCTCCGCCACCGATTGGTACAAGAGG
GAATAAGGAAGAGGGAGAGGAGGAGGCAGCTGACGGAACAGAAATTGATG
ACGTCGATGCTACATTGAAACAGTCACCACCGCCCGCGCCCCACGCCGCC
CCTGCCGCCGGTGCGGGCTCGGCGCAATGGTATGAACGAGCGTACGACTA
TTGGGAAGATGGCGAAAACTGTGGACTTGATGACGATGGCGTTCTCGGCG
GCTACGGACACATTTCTCCCACAGACATATCAGGCTCGGCCTCTTTCTTG
GATTATATTAAGTCCATGAGACCATTGCTCGGGGACGAAAAAGCGGCAGA
TTGGTACAAGAGGGAATAAGGAAGAGGGAGAGGAGGAGGCAGCTGACGGA
ACAGAAATTGATGACGTCGATGCTACATTGAAACAGTCACCACCGCCCGC
GCCCCACGCCGCCCCTGCCGCCGGTGCGGGCTCGGCGCAATGGTATGAAC
GAGCGTACGACTATTGGGAAGATGGCGAAAACTGTGGACTTGATGACGAT
GGCGTTCTCGGCGGCTACGGACACATTTCTCCCACAGACATATCAGGCTC
GGCCTCTTTCTTGGATTATATTAAGTCCATGAGACCATTGCTCGGGGACG
AAAAAGCGGCAGATTGTGGCGCCGGCATTGGAAGGATAACGAAGCATCTT
CTTCTTGATCGTTTTGATTCGGTCGACATAGTGGAACAGAGCCCACGCCT
GTTAAGAGCGGCGCCGAAGTATGTGGGACAGGAAAGAGACCGCACGGAGT
GCCTATGCATAGGGCTACAGATTGTGGCGCCGGCATTGGAAGGATAACGA
AGCATCTTCTTCTTGATCGTTTTGATTCGGTCGACATAGTGGAACAGAGC
CCACGCCTGTTAAGAGCGGCGCCGAAGTATGTGGGACAGGAAAGAGACCG
CACGGAGTGCCTATGCATAGGGCTACAGGATTTTTTTCCAGCCGAGGACA
AGTACGATCTATTCTGGATACAGTGGGTCGTTGGTCATTTCACAGATGTG
GACCTCATCAAATTGATGAACCGTTGCCGGGGGGCTCTCAAGAAAGGTGG
TTTGGTAGTGATAAAGGACAACGTGGTGCCGGTGGGGGGGGAAGAGGGCG
CTTTCATAGTCGATTGCGAGGACAGTAGCATGACGCGATCTCTGGGGTAC
TTTCGGAGTCTGTTCAATCACGGAGGAATTAAAGTCGTGCATCAGCAACG
GCAAGAGGGATTTCCCGGAGAAATTTTCCCCGTGTACATGTTCGCGTTGG
AGTAGGATTTTTTTCCAGCCGAGGACAAGTACGATCTATTCTGGATACAG
TGGGTCGTTGGTCATTTCACAGATGTGGACCTCATCAAATTGATGAACCG
TTGCCGGGGGGCTCTCAAGAAAGGTGGTTTGGTAGTGATAAAGGACAACG
TGGTGCCGGTGGGGGGGGAAGAGGGCGCTTTCATAGTCGATTGCGAGGAC
AGTAGCATGACGCGATCTCTGGGGTACTTTCGGAGTCTGTTCAATCACGG
AGGAATTAAAGTCGTGCATCAGCAACGGCAAGAGGGATTTCCCGGAGAAA
TTTTCCCCGTGTACATGTTCGCGTTGGAGTAG
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