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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1903 |
| Cds size | 1152 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig273.7469.1 >prot_H-paniculata_contig273.7469.1 ID=prot_H-paniculata_contig273.7469.1|Name=mRNA_H-paniculata_contig273.7469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=384bp
MGFDHKKNTNPGDIRLLDARDGDATAELKENGDDGRYPTTESMPLYSPNH
AVYTGQQGVVRQPVRPREPRPQSGDATPHARTRTSSPLFLGNTTSERRRP
PGKTNEVDSNGDDNCNESRRTLNRLLRDERSKLGTLTRRFTVAAAGYGGY
EGRNFCAIRSKESAGTMNVISTPASSVGVSEDENDPFSLHNSRVSAEYSP
PCPPSPQSTASYESCPADSARNPGDIGNYARSAENLNTSYSLKHLGSEGC
GCPQPRSQSWAVQGFQEPGGGGGLGSGFDVDSIGASERFSTLCCSNPTMT
LPRSDAGASGGTSSVGSGGMAVATTITTGKGGARTTPPSFSGRSTLATLE
GASRLWHPRETWNSEQPTAVVNSVAAADDQSIT* back to topmRNA from alignment at H-paniculata_contig273:3492..5425+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig273.7469.1 ID=mRNA_H-paniculata_contig273.7469.1|Name=mRNA_H-paniculata_contig273.7469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1934bp|location=Sequence derived from alignment at H-paniculata_contig273:3492..5425+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAACGGCAAGCATATCAGGCGAAGTGCCACATAACGAAGGGGTTTCTTGC
CGCAAGCAGGAAGGCGGACAATCGAGCGAAACAACAACCGCCCCCTCATC
GGATGTGACCTTAGGCACATGTACAAGCGACTTCTTCCCGCTTGAAGTTA
CAGACCGTGAATCGCCGTCACCAGGACACCACCGGGGGGGAATACTCGGT
ACAGAAGAGGAACCAACAACCTCTGAGAGAACAAAGCTGACAAGTCTGGG
CAACCTATTAACACAGGGCAAGGGTAGTGGGACTCGCGTAGTCGCAAAGT
GCAAGGAAAAGGAGGCGCGCACTGACGTTGATGCGGAAACAATTATTTCC
GGTGCCCCCTTACGGAACTACATGGGTTTTGACCATAAAAAAAATACCAA
TCCCGGCGATATTCGCCTACTCGATGCTAGGGATGGCGATGCAACGGCAG
AGCTAAAGGAGAACGGCGATGATGGGCGTTACCCGACGACAGAATCCATG
CCGCTCTACTCTCCCAACCACGCTGTCTACACGGGGCAACAAGGGGTCGT
CAGGCAGCCAGTCCGCCCTCGCGAACCTAGACCTCAATCAGGAGACGCGA
CCCCTCATGCGCGGACTCGGACATCGTCGCCTTTGTTTTTGGGGAATACG
ACTAGCGAACGCCGCCGTCCACCGGGGAAAACAAACGAAGTAGATAGCAA
CGGCGACGACAATTGTAACGAGAGTAGGAGGACGTTAAACCGGTTGCTGC
GAGACGAACGTTCCAAGCTGGGAACACTCACGAGGCGCTTCACAGTAGCA
GCAGCCGGCTACGGCGGGTATGAAGGAAGAAATTTTTGTGCGATACGGTC
AAAAGAGAGTGCGGGAACAATGAATGTCATCTCCACTCCAGCTTCAAGTG
TGGGAGTCTCTGAGGATGAAAATGATCCATTCAGCCTTCATAACTCCCGA
GTTTCGGCTGAATATTCACCTCCTTGCCCTCCATCTCCACAGTCAACAGC
AAGCTACGAGTCGTGTCCGGCCGATAGTGCGCGCAATCCCGGTGACATCG
GAAACTACGCACGCTCAGCGGAAAATCTAAATACGTCGTATTCACTAAAG
CACCTTGGCAGCGAAGGTTGTGGTTGCCCACAACCACGGAGTCAGTCTTG
GGCAGTGCAAGGTTTCCAAGAACCAGGTGGGGGTGGAGGACTAGGAAGCG
GGTTCGACGTCGACTCTATCGGCGCGTCCGAAAGATTCAGTACCCTCTGC
TGCAGCAACCCCACGATGACGTTACCCCGCAGTGATGCCGGTGCGTCTGG
AGGTACATCAAGCGTTGGGTCTGGCGGCATGGCAGTTGCCACCACTATCA
CCACAGGAAAAGGTGGAGCGAGAACAACACCACCATCATTTTCTGGTCGT
TCTACACTGGCGACTCTCGAAGGAGCCTCGAGACTGTGGCACCCTCGAGA
AACGTGGAATAGCGAACAGCCTACGGCTGTTGTTAATAGTGTGGCTGCCG
CAGATGACCAATCGGTCATAACGAGTGGGTCAACGAGATCCTCAGATAAC
ATAGATACCGCGTGCGCAATCTTAGGTGGCGAAAGTTGGGCGTCGATATG
TATCGTCGCCGGAAAGTTAGTGCCATCCGGGGGAGTCGCTGATGAGGCCA
CTCATGAGCGTCCTTCCGACGAAGGAATCCCGCCCCTCGGCTCGGTTGAA
GAGCGGTCGACACATGTGGCGGGAAACGCGGGGTCGGGGCCCCCATAAGC
GCTTTAACTGCAACCCCGGGGGCATTTTGACATCGTGGGGGAAAATCCTG
TTGAACGATATCGATGTATCTTGTAGAGTTTTAAAACGTTGAAAATGAAG
AAGATAGTAGGCCGAGTAAACGCCTTTTAAGTAGAGCAATGTAGTGTCAT
AATGAGCCCTTACGCTAAAGGTATAGATTAATAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig273:3492..5425+ >mRNA_H-paniculata_contig273.7469.1 ID=mRNA_H-paniculata_contig273.7469.1|Name=mRNA_H-paniculata_contig273.7469.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2304bp|location=Sequence derived from alignment at H-paniculata_contig273:3492..5425+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTTTTGACCATAAAAAAAATACCAATCCCGGCGATATTCGCCTACT
CGATGCTAGGGATGGCGATGCAACGGCAGAGCTAAAGGAGAACGGCGATG
ATGGGCGTTACCCGACGACAGAATCCATGCCGCTCTACTCTCCCAACCAC
GCTGTCTACACGGGGCAACAAGGGGTCGTCAGGCAGCCAGTCCGCCCTCG
CGAACCTAGACCTCAATCAGGAGACGCGACCCCTCATGCGCGGACTCGGA
CATCGTCGCCTTTGTTTTTGGGGAATACGACTAGCGAACGCCGCCGTCCA
CCGGGGAAAACAAACGAAGTAGATAGCAACGGCGACGACAATTGTAACGA
GAGTAGGAGGACGTTAAACCGGTTGCTGCGAGACGAACGTTCCAAGCTGG
GAACACTCACGAGGCGCTTCACAGTAGCAGCAGCCGGCTACGGCGGGTAT
GAAGGAAGAAATTTTTGTGCGATACGGTCAAAAGAGAGTGCGGGAACAAT
GAATGTCATCTCCACTCCAGCTTCAAGTGTGGGAGTCTCTGAGGATGAAA
ATGATCCATTCAGCCTTCATAACTCCCGAGTTTCGGCTGAATATTCACCT
CCTTGCCCTCCATCTCCACAGTCAACAGCAAGCTACGAGTCGTGTCCGGC
CGATAGTGCGCGCAATCCCGGTGACATCGGAAACTACGCACGCTCAGCGG
AAAATCTAAATACGTCGTATTCACTAAAGCACCTTGGCAGCGAAGGTTGT
GGTTGCCCACAACCACGGAGTCAGTCTTGGGCAGTGCAAGGTTTCCAAGA
ACCAGGTGGGGGTGGAGGACTAGGAAGCGGGTTCGACGTCGACTCTATCG
GCGCGTCCGAAAGATTCAGTACCCTCTGCTGCAGCAACCCCACGATGACG
TTACCCCGCAGTGATGCCGGTGCGTCTGGAGGTACATCAAGCGTTGGGTC
TGGCGGCATGGCAGTTGCCACCACTATCACCACAGGAAAAGGTGGAGCGA
GAACAACACCACCATCATTTTCTGGTCGTTCTACACTGGCGACTCTCGAA
GGAGCCTCGAGACTGTGGCACCCTCGAGAAACGTGGAATAGCGAACAGCC
TACGGCTGTTGTTAATAGTGTGGCTGCCGCAGATGACCAATCGATGGGTT
TTGACCATAAAAAAAATACCAATCCCGGCGATATTCGCCTACTCGATGCT
AGGGATGGCGATGCAACGGCAGAGCTAAAGGAGAACGGCGATGATGGGCG
TTACCCGACGACAGAATCCATGCCGCTCTACTCTCCCAACCACGCTGTCT
ACACGGGGCAACAAGGGGTCGTCAGGCAGCCAGTCCGCCCTCGCGAACCT
AGACCTCAATCAGGAGACGCGACCCCTCATGCGCGGACTCGGACATCGTC
GCCTTTGTTTTTGGGGAATACGACTAGCGAACGCCGCCGTCCACCGGGGA
AAACAAACGAAGTAGATAGCAACGGCGACGACAATTGTAACGAGAGTAGG
AGGACGTTAAACCGGTTGCTGCGAGACGAACGTTCCAAGCTGGGAACACT
CACGAGGCGCTTCACAGTAGCAGCAGCCGGCTACGGCGGGTATGAAGGAA
GAAATTTTTGTGCGATACGGTCAAAAGAGAGTGCGGGAACAATGAATGTC
ATCTCCACTCCAGCTTCAAGTGTGGGAGTCTCTGAGGATGAAAATGATCC
ATTCAGCCTTCATAACTCCCGAGTTTCGGCTGAATATTCACCTCCTTGCC
CTCCATCTCCACAGTCAACAGCAAGCTACGAGTCGTGTCCGGCCGATAGT
GCGCGCAATCCCGGTGACATCGGAAACTACGCACGCTCAGCGGAAAATCT
AAATACGTCGTATTCACTAAAGCACCTTGGCAGCGAAGGTTGTGGTTGCC
CACAACCACGGAGTCAGTCTTGGGCAGTGCAAGGTTTCCAAGAACCAGGT
GGGGGTGGAGGACTAGGAAGCGGGTTCGACGTCGACTCTATCGGCGCGTC
CGAAAGATTCAGTACCCTCTGCTGCAGCAACCCCACGATGACGTTACCCC
GCAGTGATGCCGGTGCGTCTGGAGGTACATCAAGCGTTGGGTCTGGCGGC
ATGGCAGTTGCCACCACTATCACCACAGGAAAAGGTGGAGCGAGAACAAC
ACCACCATCATTTTCTGGTCGTTCTACACTGGCGACTCTCGAAGGAGCCT
CGAGACTGTGGCACCCTCGAGAAACGTGGAATAGCGAACAGCCTACGGCT
GTTGTTAATAGTGTGGCTGCCGCAGATGACCAATCGATAACATAGATAAC
ATAG back to top
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