mRNA_H-paniculata_contig27273.7462.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A6H5KPF6_9PHAE (EngB-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPF6_9PHAE) HSP 1 Score: 188 bits (478), Expect = 3.020e-54 Identity = 94/111 (84.68%), Postives = 104/111 (93.69%), Query Frame = 1
Query: 1 HPQVPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLMAELPDTARYVVVLTKADKSANSVSKAVLESVVAALRDAGVSRTPVVLTSASSRLGRDGMWR 333
+ +VPEKQR EW+ LFRSY+TRRSSLRV+FHL+DGRHGPVGQDH IMKLMAELPDTARYVVVLTKADKS NSVS+ VLE VVAALR+AGVSRTPVVLTSA+S+LGRDGMWR
Sbjct: 496 YAKVPEKQRKEWSTLFRSYITRRSSLRVLFHLIDGRHGPVGQDHAIMKLMAELPDTARYVVVLTKADKSDNSVSRQVLEGVVAALREAGVSRTPVVLTSAASKLGRDGMWR 606
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A836C8M6_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8M6_9STRA) HSP 1 Score: 139 bits (349), Expect = 6.080e-38 Identity = 67/111 (60.36%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 1 HPQVPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLMAELPDTARYVVVLTKADKSANSVSKAVLESVVAALRDAGVSRTPVVLTSASSRLGRDGMWR 333
+ +V E+ RT W DL + YV +R SLRV+FHL+DGRHGPVG D IMK MA LP ARYV+VLTKADK N+VS V+ + + ALR+AGV PVV+TSA ++LGRD MWR
Sbjct: 184 YAKVSEQLRTSWQDLLKQYVAQRRSLRVLFHLLDGRHGPVGHDKAIMKEMARLPSYARYVIVLTKADKQDNTVSAGVMAATITALREAGVENAPVVITSAETKLGRDAMWR 294
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A7S0AGB6_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AGB6_9STRA) HSP 1 Score: 110 bits (275), Expect = 1.420e-28 Identity = 55/117 (47.01%), Postives = 79/117 (67.52%), Query Frame = 1
Query: 10 VPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLMAE-LPDTARYVVVLTKADKS--------ANSVSKAVLESVVAALRDAGVSRTPVVLTSASSRLGRDGMWR 333
VP++QR EW+D F+ YV R +L+++FHL+D RHGP+ +D IMK + E LP +YVVVLTKADK+ + V++ LESV ++ GV PV+L+SA ++LGRD +WR
Sbjct: 32 VPQQQRQEWSDFFKDYVANRKNLKILFHLVDARHGPIDEDSRIMKQVGETLPKNVKYVVVLTKADKNVKGPSTKNSGKVARGTLESVRETMKANGVGNAPVLLSSAETKLGRDDLWR 148
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A7S3V5Y5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5Y5_9STRA) HSP 1 Score: 110 bits (274), Expect = 7.770e-26 Identity = 57/117 (48.72%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 10 VPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLMAEL-PDTARYVVVLTKADKS--------ANSVSKAVLESVVAALRDAGVSRTPVVLTSASSRLGRDGMWR 333
VPEKQR EW+D Y+ R +LRV+FHL+DGRHGP+ +D IMK + E P +YV+VLTKADK+ + V K VL+ + A ++ GV P++LTSA ++LGRD MWR
Sbjct: 446 VPEKQRQEWSDFLSEYIETRKTLRVIFHLIDGRHGPIDEDFNIMKQVGEQKPKGVQYVIVLTKADKNIKGPNTTNSGKVQKKVLDKLRIAAKENGVGTAPILLTSAETKLGRDDMWR 562
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A7S3L5M9_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5M9_9STRA) HSP 1 Score: 102 bits (253), Expect = 6.140e-23 Identity = 55/120 (45.83%), Postives = 78/120 (65.00%), Query Frame = 1
Query: 1 HPQVPEKQRTEWADLFRSYVTRRS-SLRVMFHLMDGRHGPVGQDHVIMKLMAE-LPDTARYVVVLTKADKSANSVSKA--------VLESVVAALRDAGVSRTPVVLTSASSRLGRDGMW 330
+ +VPEKQR +WA Y++ R +L+V+FHL+DGRHGP +D IMK ++E LP RYVVVLTK+DK+ +K V+ES+ ++ GV PVV+TSA ++LGRD +W
Sbjct: 475 YAKVPEKQRQQWASFMDEYISSRGDTLKVLFHLVDGRHGPTDEDGAIMKKVSEVLPPYTRYVVVLTKSDKNVKGPNKTNTGKVSIDVMESLGKTMKANGVGSAPVVMTSAETKLGRDAVW 594
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A6V1PQB5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PQB5_HETAK) HSP 1 Score: 97.8 bits (242), Expect = 6.430e-23 Identity = 54/111 (48.65%), Postives = 69/111 (62.16%), Query Frame = 1
Query: 1 HPQVPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLMAE-LPDTARYVVVLTKADKSANSVSKAVLESVVAALRDAGVSRTPVVLTSASSRLGRDGMW 330
+ +VP+ R +W Y++ R L+V+FHL+D RHGPV D IM + + L A+YVVVLTKADK V +AV +V AAL S PVV+TSA SRLGRD MW
Sbjct: 107 YAKVPKHLRDQWVQFLTQYISERKGLKVLFHLIDSRHGPVETDLEIMGMARDHLAPGAQYVVVLTKADKKDGKVPRAVRAAVAAALEAEYGSGAPVVITSAESRLGRDAMW 217
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A7S4JVK0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JVK0_9STRA) HSP 1 Score: 99.4 bits (246), Expect = 5.600e-22 Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 1
Query: 10 VPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLMAE-LPDTARYVVVLTKADKSANS--------VSKAVLESVVAALRDAGVSRTPVVLTSASSRLGRDGMWR 333
VP++QR W DLF Y+ R +L+V+FHL+D RHGP +D IMK + E L +YVVVLTKADK+ V+K+VLE + ++ V P +LTS+ ++LGRD MWR
Sbjct: 510 VPQQQRQAWTDLFTEYIGSRKTLKVVFHLVDARHGPTDEDERIMKQIGETLSKNVKYVVVLTKADKNVKGASTKNSGRVTKSVLEKLRETMKLYKVGSAPAILTSSETKLGRDDMWR 626
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A7S2XQU2_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XQU2_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 8.300e-22 Identity = 51/117 (43.59%), Postives = 75/117 (64.10%), Query Frame = 1
Query: 10 VPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLMAELP-DTARYVVVLTKADK--------SANSVSKAVLESVVAALRDAGVSRTPVVLTSASSRLGRDGMWR 333
VP+K + EWAD Y+++R ++RV+FHL+D RHGP+ +D IM+ + + +YVVVLTKADK S VS V++ + A++ V+ PV+LTSA ++LGRD MWR
Sbjct: 165 VPQKIKQEWADFMSEYISKRKTIRVIFHLVDARHGPIDEDMRIMQTIGQNSIKNTKYVVVLTKADKNTKGASSTSGGRVSSDVMDKLREAMKANKVANAPVLLTSAQTKLGRDEMWR 281
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A7S0CLN1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CLN1_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.230e-21 Identity = 50/117 (42.74%), Postives = 76/117 (64.96%), Query Frame = 1
Query: 7 QVPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLMAE-LPDTARYVVVLTKADKSANS-------VSKAVLESVVAALRDAGVSRTPVVLTSASSRLGRDGMWR 333
QVP++QR +W + Y++ R +L+V+FHL+D RHGP +D IMK M+E L Y +VLTKADK+ + VS+ V+E + ++ A V +PV+LTS+ ++LGRD +WR
Sbjct: 385 QVPQQQRQKWVEFTNEYISTRENLKVVFHLVDARHGPTSEDEKIMKQMSENLRKGVTYAIVLTKADKNGKNKEGKKGQVSQKVMEKLRQSMSQAKVGDSPVILTSSETKLGRDDIWR 501
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Match: A0A4D9D8J4_9STRA (EngB-type G domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8J4_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.670e-21 Identity = 52/113 (46.02%), Postives = 77/113 (68.14%), Query Frame = 1
Query: 1 HPQVPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLM-AELPDTARYVVVLTKADKSANSVSKAVLESVVAALRDAGVSRT-PVVLTSASSRLGRDGMWR 333
+ +VP ++++WA F SY+ +RSSL+V+FHL+D RHGP+ QD + M+ M A L +YV++LTKADK VS ++ + V AL + T PV++TSA +RLGRD +WR
Sbjct: 539 YAKVPLAEKSKWASFFESYLAQRSSLKVVFHLIDSRHGPLAQDLMTMEAMRASLRPGVQYVIILTKADKKDGKVSPSLKQQVADALDAHQLKETTPVLVTSAVNRLGRDEVWR 651 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27273.7462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27273.7462.1 >prot_H-paniculata_contig27273.7462.1 ID=prot_H-paniculata_contig27273.7462.1|Name=mRNA_H-paniculata_contig27273.7462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=112bp HPQVPEKQRTEWADLFRSYVTRRSSLRVMFHLMDGRHGPVGQDHVIMKLMback to top mRNA from alignment at H-paniculata_contig27273:2443..3211- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27273.7462.1 ID=mRNA_H-paniculata_contig27273.7462.1|Name=mRNA_H-paniculata_contig27273.7462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=769bp|location=Sequence derived from alignment at H-paniculata_contig27273:2443..3211- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27273:2443..3211- >mRNA_H-paniculata_contig27273.7462.1 ID=mRNA_H-paniculata_contig27273.7462.1|Name=mRNA_H-paniculata_contig27273.7462.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=672bp|location=Sequence derived from alignment at H-paniculata_contig27273:2443..3211- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |