prot_H-paniculata_contig2725.7454.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2725.7454.1
Unique Nameprot_H-paniculata_contig2725.7454.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length55
Homology
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BLAST of mRNA_H-paniculata_contig2725.7454.1 vs. uniprot
Match: A0A6H5KPV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV7_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 7.150e-12
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0 
Query:    1 MRERGIVLDPHLDHGTIVRICAEVGVRVEELDSSSAGPAQERL-LGD-RDEEVGED 54
            MR+RGIVLDP+LDHG + R+C EVGV VEELD S  GPAQ  +  GD  ++EVGE+
Sbjct:  631 MRDRGIVLDPYLDHGVLARVCQEVGVPVEELDPSGVGPAQSGVDFGDDAEDEVGEE 686
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BLAST of mRNA_H-paniculata_contig2725.7454.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI)

HSP 1 Score: 65.1 bits (157), Expect = 6.410e-11
Identity = 35/56 (62.50%), Postives = 43/56 (76.79%), Query Frame = 0 
Query:    1 MRERGIVLDPHLDHGTIVRICAEVGVRVEELDSSSAGPAQERL-LGD-RDEEVGED 54
            MR+RGIVLDP+LDHG + R+C EVGV VEELD S AG AQ  +  GD  ++EVGE+
Sbjct: 1580 MRDRGIVLDPYLDHGVLARVCQEVGVPVEELDPSGAGLAQAGVGFGDDAEDEVGEE 1635
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2725.7454.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPV7_9PHAE7.150e-1262.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LH96_ECTSI6.410e-1162.50Intraflagellar transport protein 140 puative n=1 T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2725contigH-paniculata_contig2725:7203..7910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2725.7454.1mRNA_H-paniculata_contig2725.7454.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2725 6936..7910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2725.7454.1 ID=prot_H-paniculata_contig2725.7454.1|Name=mRNA_H-paniculata_contig2725.7454.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=55bp
MRERGIVLDPHLDHGTIVRICAEVGVRVEELDSSSAGPAQERLLGDRDEE
VGEDL
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