prot_H-paniculata_contig2725.7453.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig2725.7453.1
Unique Name	prot_H-paniculata_contig2725.7453.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	90

Homology

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BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A6H5KPV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV7_9PHAE)

HSP 1 Score: 174 bits (442), Expect = 2.500e-49
Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 0

Query:    1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            Q GDRLKALK LLKSGDTKSI+YYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFY+KAKAH+QLSDFYDACAQVEIDEYRDYEKA
Sbjct:  448 QAGDRLKALKCLLKSGDTKSIVYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYTKAKAHLQLSDFYDACAQVEIDEYRDYEKA 537

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BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI)

HSP 1 Score: 174 bits (442), Expect = 8.920e-49
Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 0

Query:    1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            Q GDRLKALK LLKSGDTKSI+YYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFY+KAKAH+QLSDFYDACAQVEIDEYRDYEKA
Sbjct: 1397 QAGDRLKALKCLLKSGDTKSIVYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYTKAKAHLQLSDFYDACAQVEIDEYRDYEKA 1486

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BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A6T8AMR5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8AMR5_9EUKA)

HSP 1 Score: 146 bits (369), Expect = 3.020e-42
Identity = 68/88 (77.27%), Postives = 81/88 (92.05%), Query Frame = 0

Query:    3 GDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            GD++KA+K LLKSGDT+ I+++AGVSRSRDIYILAANYLQNLDWH D +++K+I+AFY+KAKA  QLS FYDACAQVEIDEYRDYEKA
Sbjct:    1 GDKVKAMKCLLKSGDTEKIVFFAGVSRSRDIYILAANYLQNLDWHSDTEIVKNIVAFYTKAKAFEQLSSFYDACAQVEIDEYRDYEKA 88

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BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A813J7B5_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J7B5_POLGL)

HSP 1 Score: 144 bits (364), Expect = 4.910e-41
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 0

Query:    1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            Q GD+LKA+KSLLKSGDT+ II++AG +R  DIY+LA NYLQ+LDWH+DP++MK+II FYSKAKAH +L+ FYDACAQVEIDEYRDYEKA
Sbjct:   32 QAGDKLKAMKSLLKSGDTEKIIFFAGTARQPDIYVLAGNYLQSLDWHNDPEIMKNIINFYSKAKAHDKLAVFYDACAQVEIDEYRDYEKA 121

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BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A1Z9KPZ9_9SYNE (Uncharacterized protein n=1 Tax=Synechococcus sp. TMED187 TaxID=1986595 RepID=A0A1Z9KPZ9_9SYNE)

HSP 1 Score: 144 bits (362), Expect = 7.600e-39
Identity = 69/90 (76.67%), Postives = 80/90 (88.89%), Query Frame = 0

Query:    1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            Q GD+LKA+K LLKSGDT+ I Y+AGVSR+R+IYILAANYLQ+LDWH D  VMK+I+AFY+KAKA  QL+ FYDACAQVEIDEYRDYEKA
Sbjct:  301 QAGDKLKAMKCLLKSGDTQKICYFAGVSRTREIYILAANYLQSLDWHSDAGVMKNIVAFYTKAKAMEQLASFYDACAQVEIDEYRDYEKA 390

[Close]

BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A835YKN9_9STRA (Putative intraflagellar transport protein 140 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN9_9STRA)

HSP 1 Score: 145 bits (367), Expect = 1.160e-38
Identity = 69/90 (76.67%), Postives = 81/90 (90.00%), Query Frame = 0

Query:    1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            Q G+RLKA+K LLK+GDTKSIIYYA V RSRD+Y+LAANYLQNLDWH D +VM+SI++FY+KAKA  QLS FY+ACAQVEIDEYR+YEKA
Sbjct: 1233 QAGERLKAMKCLLKTGDTKSIIYYASVGRSRDMYVLAANYLQNLDWHSDAEVMRSIVSFYTKAKAMEQLSGFYEACAQVEIDEYRNYEKA 1322

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BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A7S3Y5S0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5S0_HETAK)

HSP 1 Score: 144 bits (364), Expect = 1.650e-38
Identity = 71/90 (78.89%), Postives = 79/90 (87.78%), Query Frame = 0

Query:    1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            Q G+RLKALK LLKSGDTKSI YYA VSR+R+IYILAANYLQ+LDWH+    MK+II FY+KAKA+ QLS FYDACAQVEIDEYRDYEKA
Sbjct:  399 QAGERLKALKCLLKSGDTKSITYYANVSRNREIYILAANYLQSLDWHNQAATMKNIIQFYTKAKAYEQLSSFYDACAQVEIDEYRDYEKA 488

[Close]

BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A7S3S688_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S688_9SPIT)

HSP 1 Score: 138 bits (348), Expect = 2.200e-38
Identity = 62/90 (68.89%), Postives = 81/90 (90.00%), Query Frame = 0

Query:    1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            Q GD+LKA++SLLKSGDT+ I+++AG ++  DI++LA NYLQ+LDWH+DP++MK+II FYSKAKAH +L+ FYDACAQVEIDEYRDY+KA
Sbjct:  112 QAGDKLKAMRSLLKSGDTEKIMFFAGKAQQADIFVLAGNYLQSLDWHNDPEIMKNIIQFYSKAKAHDKLAAFYDACAQVEIDEYRDYDKA 201

[Close]

BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A813K9Y1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K9Y1_POLGL)

HSP 1 Score: 144 bits (364), Expect = 2.670e-38
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 0

Query:    1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            Q GD+LKA+KSLLKSGDT+ II++AG +R  DIY+LA NYLQ+LDWH+DP++MK+II FYSKAKAH +L+ FYDACAQVEIDEYRDYEKA
Sbjct:  573 QAGDKLKAMKSLLKSGDTEKIIFFAGTARQPDIYVLAGNYLQSLDWHNDPEIMKNIINFYSKAKAHDKLAVFYDACAQVEIDEYRDYEKA 662

[Close]

BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A813H984_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H984_POLGL)

HSP 1 Score: 144 bits (364), Expect = 2.920e-38
Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 0

Query:    1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 90
            Q GD+LKA+KSLLKSGDT+ II++AG +R  DIY+LA NYLQ+LDWH+DP++MK+II FYSKAKAH +L+ FYDACAQVEIDEYRDYEKA
Sbjct:  122 QAGDKLKAMKSLLKSGDTEKIIFFAGTARQPDIYVLAGNYLQSLDWHNDPEIMKNIINFYSKAKAHDKLAVFYDACAQVEIDEYRDYEKA 211

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KPV7_9PHAE	2.500e-49	94.44	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LH96_ECTSI	8.920e-49	94.44	Intraflagellar transport protein 140 puative n=1 T...	[more]
A0A6T8AMR5_9EUKA	3.020e-42	77.27	Hypothetical protein n=1 Tax=Prymnesium polylepis ...	[more]
A0A813J7B5_POLGL	4.910e-41	74.44	Hypothetical protein (Fragment) n=1 Tax=Polarella ...	[more]
A0A1Z9KPZ9_9SYNE	7.600e-39	76.67	Uncharacterized protein n=1 Tax=Synechococcus sp. ...	[more]
A0A835YKN9_9STRA	1.160e-38	76.67	Putative intraflagellar transport protein 140 n=1 ...	[more]
A0A7S3Y5S0_HETAK	1.650e-38	78.89	Hypothetical protein n=1 Tax=Heterosigma akashiwo ...	[more]
A0A7S3S688_9SPIT	2.200e-38	68.89	Hypothetical protein (Fragment) n=1 Tax=Strombidin...	[more]
A0A813K9Y1_POLGL	2.670e-38	74.44	Hypothetical protein n=1 Tax=Polarella glacialis T...	[more]
A0A813H984_POLGL	2.920e-38	74.44	Hypothetical protein (Fragment) n=1 Tax=Polarella ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15722	IFT140/172-RELATED	coord: 1..90
None	No IPR available	PANTHER	PTHR15722:SF7	INTRAFLAGELLAR TRANSPORT PROTEIN 140 HOMOLOG	coord: 1..90

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig2725	contig	H-paniculata_contig2725:5093..6359 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig2725.7453.1	mRNA_H-paniculata_contig2725.7453.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig2725 5093..6360 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig2725.7453.1 ID=prot_H-paniculata_contig2725.7453.1|Name=mRNA_H-paniculata_contig2725.7453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDP
QVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA