mRNA_H-paniculata_contig2725.7453.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A6H5KPV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV7_9PHAE) HSP 1 Score: 174 bits (442), Expect = 2.500e-49 Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 1
Query: 1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
Q GDRLKALK LLKSGDTKSI+YYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFY+KAKAH+QLSDFYDACAQVEIDEYRDYEKA
Sbjct: 448 QAGDRLKALKCLLKSGDTKSIVYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYTKAKAHLQLSDFYDACAQVEIDEYRDYEKA 537
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: D8LH96_ECTSI (Intraflagellar transport protein 140 puative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH96_ECTSI) HSP 1 Score: 174 bits (442), Expect = 8.920e-49 Identity = 85/90 (94.44%), Postives = 88/90 (97.78%), Query Frame = 1
Query: 1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
Q GDRLKALK LLKSGDTKSI+YYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFY+KAKAH+QLSDFYDACAQVEIDEYRDYEKA
Sbjct: 1397 QAGDRLKALKCLLKSGDTKSIVYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYTKAKAHLQLSDFYDACAQVEIDEYRDYEKA 1486
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A6T8AMR5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A6T8AMR5_9EUKA) HSP 1 Score: 146 bits (369), Expect = 3.020e-42 Identity = 68/88 (77.27%), Postives = 81/88 (92.05%), Query Frame = 1
Query: 7 GDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
GD++KA+K LLKSGDT+ I+++AGVSRSRDIYILAANYLQNLDWH D +++K+I+AFY+KAKA QLS FYDACAQVEIDEYRDYEKA
Sbjct: 1 GDKVKAMKCLLKSGDTEKIVFFAGVSRSRDIYILAANYLQNLDWHSDTEIVKNIVAFYTKAKAFEQLSSFYDACAQVEIDEYRDYEKA 88
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A813J7B5_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J7B5_POLGL) HSP 1 Score: 144 bits (364), Expect = 4.910e-41 Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
Q GD+LKA+KSLLKSGDT+ II++AG +R DIY+LA NYLQ+LDWH+DP++MK+II FYSKAKAH +L+ FYDACAQVEIDEYRDYEKA
Sbjct: 32 QAGDKLKAMKSLLKSGDTEKIIFFAGTARQPDIYVLAGNYLQSLDWHNDPEIMKNIINFYSKAKAHDKLAVFYDACAQVEIDEYRDYEKA 121
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A1Z9KPZ9_9SYNE (Uncharacterized protein n=1 Tax=Synechococcus sp. TMED187 TaxID=1986595 RepID=A0A1Z9KPZ9_9SYNE) HSP 1 Score: 144 bits (362), Expect = 7.600e-39 Identity = 69/90 (76.67%), Postives = 80/90 (88.89%), Query Frame = 1
Query: 1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
Q GD+LKA+K LLKSGDT+ I Y+AGVSR+R+IYILAANYLQ+LDWH D VMK+I+AFY+KAKA QL+ FYDACAQVEIDEYRDYEKA
Sbjct: 301 QAGDKLKAMKCLLKSGDTQKICYFAGVSRTREIYILAANYLQSLDWHSDAGVMKNIVAFYTKAKAMEQLASFYDACAQVEIDEYRDYEKA 390
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A835YKN9_9STRA (Putative intraflagellar transport protein 140 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKN9_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.160e-38 Identity = 69/90 (76.67%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
Q G+RLKA+K LLK+GDTKSIIYYA V RSRD+Y+LAANYLQNLDWH D +VM+SI++FY+KAKA QLS FY+ACAQVEIDEYR+YEKA
Sbjct: 1233 QAGERLKAMKCLLKTGDTKSIIYYASVGRSRDMYVLAANYLQNLDWHSDAEVMRSIVSFYTKAKAMEQLSGFYEACAQVEIDEYRNYEKA 1322
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A7S3Y5S0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y5S0_HETAK) HSP 1 Score: 144 bits (364), Expect = 1.650e-38 Identity = 71/90 (78.89%), Postives = 79/90 (87.78%), Query Frame = 1
Query: 1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
Q G+RLKALK LLKSGDTKSI YYA VSR+R+IYILAANYLQ+LDWH+ MK+II FY+KAKA+ QLS FYDACAQVEIDEYRDYEKA
Sbjct: 399 QAGERLKALKCLLKSGDTKSITYYANVSRNREIYILAANYLQSLDWHNQAATMKNIIQFYTKAKAYEQLSSFYDACAQVEIDEYRDYEKA 488
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A7S3S688_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3S688_9SPIT) HSP 1 Score: 138 bits (348), Expect = 2.200e-38 Identity = 62/90 (68.89%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
Q GD+LKA++SLLKSGDT+ I+++AG ++ DI++LA NYLQ+LDWH+DP++MK+II FYSKAKAH +L+ FYDACAQVEIDEYRDY+KA
Sbjct: 112 QAGDKLKAMRSLLKSGDTEKIMFFAGKAQQADIFVLAGNYLQSLDWHNDPEIMKNIIQFYSKAKAHDKLAAFYDACAQVEIDEYRDYDKA 201
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A813K9Y1_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813K9Y1_POLGL) HSP 1 Score: 144 bits (364), Expect = 2.670e-38 Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
Q GD+LKA+KSLLKSGDT+ II++AG +R DIY+LA NYLQ+LDWH+DP++MK+II FYSKAKAH +L+ FYDACAQVEIDEYRDYEKA
Sbjct: 573 QAGDKLKAMKSLLKSGDTEKIIFFAGTARQPDIYVLAGNYLQSLDWHNDPEIMKNIINFYSKAKAHDKLAVFYDACAQVEIDEYRDYEKA 662
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Match: A0A813H984_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813H984_POLGL) HSP 1 Score: 144 bits (364), Expect = 2.920e-38 Identity = 67/90 (74.44%), Postives = 81/90 (90.00%), Query Frame = 1
Query: 1 QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPQVMKSIIAFYSKAKAHVQLSDFYDACAQVEIDEYRDYEKA 270
Q GD+LKA+KSLLKSGDT+ II++AG +R DIY+LA NYLQ+LDWH+DP++MK+II FYSKAKAH +L+ FYDACAQVEIDEYRDYEKA
Sbjct: 122 QAGDKLKAMKSLLKSGDTEKIIFFAGTARQPDIYVLAGNYLQSLDWHNDPEIMKNIINFYSKAKAHDKLAVFYDACAQVEIDEYRDYEKA 211 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2725.7453.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2725.7453.1 >prot_H-paniculata_contig2725.7453.1 ID=prot_H-paniculata_contig2725.7453.1|Name=mRNA_H-paniculata_contig2725.7453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp QVGDRLKALKSLLKSGDTKSIIYYAGVSRSRDIYILAANYLQNLDWHDDPback to top mRNA from alignment at H-paniculata_contig2725:5093..6360+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2725.7453.1 ID=mRNA_H-paniculata_contig2725.7453.1|Name=mRNA_H-paniculata_contig2725.7453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1268bp|location=Sequence derived from alignment at H-paniculata_contig2725:5093..6360+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2725:5093..6360+ >mRNA_H-paniculata_contig2725.7453.1 ID=mRNA_H-paniculata_contig2725.7453.1|Name=mRNA_H-paniculata_contig2725.7453.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at H-paniculata_contig2725:5093..6360+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |