mRNA_H-paniculata_contig2724.7449.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2724.7449.1
Unique NamemRNA_H-paniculata_contig2724.7449.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: A0A6H5K098_9PHAE (AST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K098_9PHAE)

HSP 1 Score: 464 bits (1195), Expect = 2.260e-154
Identity = 231/324 (71.30%), Postives = 260/324 (80.25%), Query Frame = 3
Query:  138 TMSFRDVSPREKGKLVLWPLQV--KEVNYELITCRGIPQNNSHDEGVLNELIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAFGGFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVENSSLSAMKKVAAPVKSEAAASHFKE--HLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGLSM 1097
            T  FR++  R K  L  W L+   +EV Y L  CRG+PQN++HDE  LN LI+TF+TRDSDVF+CTYVKSGTTWTQQIIN+L NKGE    +YAEAVPWLEAA FGG LG  EAT WT++ I AN ++RFFKTHANLKDLPCGKAPG KVIYVCRNPKDVCVSL HHA NKPMF Y G+FS++L FFAEG CENGSWFDHVLEW+EASKADPEHV+FLRYED++ADP + VKKIADF GIETTPEIIEKTV  S++SAMK       S A A+  KE  HLRKGGAGGWRDVF VR+S   DR+Y EQM GSGLEMDFGEGLSM
Sbjct:    4 TTPFRELGGRAKVSLPAWELRKDKEEVKYVLKVCRGVPQNDAHDEESLNSLIDTFETRDSDVFVCTYVKSGTTWTQQIINLLRNKGEDGDDTYAEAVPWLEAALFGGKLGEKEATNWTLDKIVANSDKRFFKTHANLKDLPCGKAPGVKVIYVCRNPKDVCVSLQHHATNKPMFQYTGDFSDMLTFFAEGRCENGSWFDHVLEWHEASKADPEHVIFLRYEDILADPPTYVKKIADFVGIETTPEIIEKTVAASTISAMK-------SSANANTQKEVNHLRKGGAGGWRDVFKVRESEAFDRLYREQMKGSGLEMDFGEGLSM 320          
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: D7G187_ECTSI (Aryl sulfotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G187_ECTSI)

HSP 1 Score: 348 bits (894), Expect = 3.060e-109
Identity = 174/328 (53.05%), Postives = 230/328 (70.12%), Query Frame = 3
Query:  141 MSFRDVSPREKGKLVLW-PL-QVKEVNYELITCRGIPQNNSHDEGVLNELIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAFG-------GFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVENSSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGLSM 1097
            M FRD+  R +  +  W P+ + KE  Y L    G+ Q +  +E   NELI TF++RD DVF+CT+ KSGTTW QQII +LLN GE+  ++Y   VPW+E+  F        G     EA GWT+E I +NPE+RFFK+HANLK LP G A G KVIYV RNPKDV VSL+HH +NK    +DG+ S+++R F +G CENGSWF+HVLEW+EA++ADPEHVLFL YE+++ D   +++KIA F+GIE TPE I KT++ S++ AM++ A  V +    +HF    RKGGAGGWRDV+TVR+S   D++Y+EQM G+GL+MDFGEGL M
Sbjct:   18 MPFRDLPTRPRMVVPQWLPMKEEKETKYTLNLVNGVYQMHKQEEEATNELIRTFESRDDDVFVCTFCKSGTTWVQQIITLLLNNGEQGEKNYTSVVPWMESLLFTPSANQPRGPGRDHEAKGWTLEKIKSNPERRFFKSHANLKQLPVGTAKGVKVIYVARNPKDVSVSLYHHVRNKQRDVFDGDESDMIRCFVKGRCENGSWFNHVLEWWEAAQADPEHVLFLHYENLLKDREGSIRKIAQFAGIEHTPETIAKTIQASTIDAMRQNA-KVNTRPGENHF----RKGGAGGWRDVYTVRESEAFDQIYMEQMEGTGLKMDFGEGLVM 340          
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: D8LHM0_ECTSI (Aryl sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHM0_ECTSI)

HSP 1 Score: 340 bits (873), Expect = 2.920e-106
Identity = 167/328 (50.91%), Postives = 223/328 (67.99%), Query Frame = 3
Query:  141 MSFRDVSPREKGKLVLW--PLQVKEVNYELITCRGIPQNNSHDEGVLNELIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAFGGFLGGI-------EATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVENSSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGLSM 1097
            M FR++  R +  +  W   ++ K+V + L    G+ Q    +E   NELI TF+TRD DVF+CT+VKSGTT TQQII +LLNKGE+  ++Y   VPW+E+  F              EA GWT+E I + P +RFFK+H+NLK LP G A G KVIYV RNPKDV VSL HH ++K    +DG+ S+++R F +G C+NGSWF+HVLEW+EA++ADPEHVLFL YE+M+ +P  N++KIADF+GIE TPE I KT   S++ +M++       +A     + HLRKGGAGGWRDV+T R+S   D +Y++QM G+GL MDFGEGL M
Sbjct:   10 MPFRELPTRPRMAVPAWLPMMEEKQVKFTLSVVNGVYQMFKQEEDATNELIRTFETRDDDVFVCTFVKSGTTLTQQIITLLLNKGEQGEKNYTSVVPWMESLLFRQPENPSPEDERDREAQGWTLEKIKSTPNRRFFKSHSNLKQLPVGSAKGLKVIYVARNPKDVSVSLFHHVRHKQKAVFDGDQSDMIRCFVQGRCQNGSWFNHVLEWWEAAQADPEHVLFLHYENMLKEPEENIRKIADFAGIEHTPETIAKTAAASTIDSMRQ-----NPKANIKPSENHLRKGGAGGWRDVYTARESEAFDEIYMQQMEGTGLRMDFGEGLVM 332          
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: D8LJX5_ECTSI (Aryl sulfotransferase, C-terminal Aryl sulfotransferase, N-terminal n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJX5_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 1.590e-104
Identity = 175/331 (52.87%), Postives = 221/331 (66.77%), Query Frame = 3
Query:  135 QTMSFRDVSPREKGKLVLWPLQVKEVNYELITCR----GIPQNNSHDEGVLNELIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAF------GGFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVENSSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGLSM 1097
            Q   FR++  R K  L    L + + +  ++       G+ Q    +E   NELI TF+TRD DVF+CT+ KSGTTW QQII +LLN G +  +SY+EAVPW+E   F         +   EA GWT+ +I + P++RF KTHANLK+LP G A G KVIYV RNPKDVCVSL+HH KNK    + GEFS+ +R F EG+  NG WFDHVLEW+EA+ ADPEH+LFL YE M+A+P  +++KIA+F+GI  TP+I+ K    SSLSAMK+     K+    S  K+HLRKGGAGGWRD FTVR+S   D +Y EQM GSGL MDFGEGL M
Sbjct:   16 QRTPFRELPRRPKMPLPPRWLMLDDTSRNIVNIHSMVNGVCQLYRQEENATNELIRTFETRDDDVFVCTFSKSGTTWVQQIITLLLNGGVQGEKSYSEAVPWMEWLTFKFGEHEDPAIRDAEAKGWTLATIKSTPDRRFMKTHANLKNLPAGSAKGLKVIYVARNPKDVCVSLYHHVKNKRPDTFSGEFSDHIRSFVEGSQMNGPWFDHVLEWWEAANADPEHILFLHYEAMLAEPQEHIRKIAEFAGINYTPDILAKADAASSLSAMKRNP---KTNLYPS--KKHLRKGGAGGWRDSFTVRESEAFDEIYREQMEGSGLRMDFGEGLVM 341          
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: A0A6S9GU12_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9GU12_HETAK)

HSP 1 Score: 320 bits (819), Expect = 3.090e-98
Identity = 167/317 (52.68%), Postives = 210/317 (66.25%), Query Frame = 3
Query:  153 DVSPREKGKLVLWPLQ--VKEVNYELITCRGIPQNNSHDEGVLNELIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAFGGFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVENSSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGLSM 1097
            D    ++ K V+W  +  ++ + Y+L   RGIPQ    +   +  LI+ F  RDSDV+ICTYVKSGTTW QQI+++L N GE   +SY+E++PWLEAA     L   EATG T+ESI      R+FKTHANL+DLP   +   KVIYV RNPKDV VSL HHAK+KP F ++G FS +L +F EG CENGSWF HVL+WY  SK +P +VLFL+YEDM ADP   +KKIADF  ++ TPE+I+K  E SSL  M+  +  V +E   +  K H RKGGAGGW D F VRQS+  D VY E M GSGL  +FG  L M
Sbjct:   27 DFEVDQQAKTVVWGPESDLEGIQYDLNVIRGIPQGPLMEPSKVENLIDNFNARDSDVYICTYVKSGTTWCQQIVHLLRNNGELGDKSYSESIPWLEAAT-SPILSQWEATGHTVESIMETEGPRYFKTHANLQDLPGRSSANPKVIYVARNPKDVVVSLLHHAKDKPCFHFNGNFSKMLHYFMEGNCENGSWFKHVLDWYNESKQNP-NVLFLKYEDMTADPPGAIKKIADFLEMDYTPELIQKVTEKSSLKFMQ--SNTVNAEMKKAGIKSHFRKGGAGGWVDHFNVRQSAAFDAVYRELMRGSGLTFNFGGDLVM 339          
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: A0A6V3BMT7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3BMT7_HETAK)

HSP 1 Score: 317 bits (813), Expect = 1.130e-97
Identity = 168/312 (53.85%), Postives = 217/312 (69.55%), Query Frame = 3
Query:  168 EKGKLVLW-PLQ-VKEVNYELITCRGIPQNNSHDEGVLNELIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAFGGFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVENSSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGLSM 1097
            ++ K V W P   + ++ Y+L + RGI Q    +E  + +LI TF++R  DVFICTYVK+GTTWTQQI ++L N GE+  ++YAE+ PWLEA      L   EATG ++ESIA     RFFKTHAN++DLP G     KVIYVCRNPKDV VSL +HAK+KP FG++G+   +L+FF EGTCENGSWF HVL+W+ AS+ + + +LFL YE MM DP + + KIA+F  IE T E++ K VE SSL +MK  +A V S+ A      H+RKGGAGGWR+ FTVRQS   D  Y E M G+GLEMDFG+G+SM
Sbjct:   10 QEAKTVQWGPADNIADIRYDLNSIRGINQCPLLEESKIEDLINTFESRPDDVFICTYVKAGTTWTQQICHLLRNGGEQGEQTYAESSPWLEAVT-SPILSQWEATGHSLESIATMEGPRFFKTHANIQDLP-GGVERPKVIYVCRNPKDVVVSLLNHAKDKPCFGFNGDLGKMLQFFMEGTCENGSWFKHVLDWWNASQNN-DRILFLHYEQMMEDPAAAITKIAEFINIELTEELLAKVVEKSSLKSMKSNSA-VTSQMAKFGITAHIRKGGAGGWRNHFTVRQSELFDLCYGELMKGTGLEMDFGDGVSM 317          
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: A0A6V1XC27_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1XC27_HETAK)

HSP 1 Score: 316 bits (810), Expect = 3.010e-97
Identity = 158/299 (52.84%), Postives = 205/299 (68.56%), Query Frame = 3
Query:  207 EVNYELITCRGIPQNNSHDEGVLNELIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAFGGFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAP--GAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVENSSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGLSM 1097
            +  Y L   RG+ +N + +E   N+LIE F TRD DVFICTYVK+GTTWTQQII +LLN G++  +SY E  PWLEAA     LG  EA G T+ESIA     RFFK+HA L +LP G+AP  G KV+YV RNPKD  VSL+HHAKNKP FGY G+F   +  F  G CENGSWF HVL+W+  S+ +P +VLFL+YEDM+ADP + V +IA+F  ++ +P  + KTV+NSS+  MK+ A     +A A     HLRKGG+GGW+D FTV  +   D++Y ++M GSGL  DFG+G+ +
Sbjct:   25 DYGYNLSKIRGVYENPTFEEAKFNDLIENFVTRDDDVFICTYVKAGTTWTQQIITLLLNGGDQGDKSYGEQCPWLEAAT-SEMLGPREAPGHTLESIATMDGPRFFKSHATLANLPRGRAPAPGLKVLYVARNPKDTVVSLYHHAKNKPEFGYTGDFKTFVELFLAGACENGSWFSHVLDWWAESQRNP-NVLFLKYEDMLADPAAAVARIAEFCALDASPAAVAKTVQNSSMKKMKESA-----QANALAAFNHLRKGGSGGWKDSFTVATNELFDQIYAKKMEGSGLTFDFGDGVQV 316          
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: A0A7S2XZC3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZC3_9STRA)

HSP 1 Score: 313 bits (803), Expect = 6.820e-96
Identity = 166/311 (53.38%), Postives = 212/311 (68.17%), Query Frame = 3
Query:  171 KGKLVLW--PLQVKEVNYELITCRGIPQNNSHDEGVLNELIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAFGGFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVENSSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGLSM 1097
            + K V W     ++ VNY+L T RG  Q    +EG +N+L+  F TRD D FICT+VK+GTTWTQQII++LLN GE+  ++YAE +PWLE+      L   EA G T+E++      RFFKTHANL DLP G+A   KVIYV RNPKDV VSL HHAK+KP F ++G+FS +L  F EG  ENGSWF HVLEW+E SK   + +LFL+YE MMADP ++V+KIA F G++ TPE+I   VE +S++AMKK AA V  +        H+RKGGAGGW++ FTVRQS   D +Y E M  +GL+ DFG G SM
Sbjct:   34 ESKTVPWGPASDLEGVNYDLATIRGTRQCPLFEEGAINDLVSNFNTRDEDTFICTFVKAGTTWTQQIIHLLLNNGEQGEQTYAERIPWLESTT-SPILRQWEAPGHTLETVRDLEGPRFFKTHANLGDLPKGQA-SPKVIYVARNPKDVVVSLFHHAKDKPCFQFNGDFSKMLHMFVEGNAENGSWFKHVLEWHEESKKS-DRILFLQYEAMMADPATHVEKIARFIGLDPTPELIATVVEKTSINAMKKNAA-VTDQMKKFGINAHIRKGGAGGWKNWFTVRQSEAFDSIYTEIMKDTGLQFDFG-GHSM 339          
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: F0YEU1_AURAN (Sulfotransfer_1 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEU1_AURAN)

HSP 1 Score: 304 bits (778), Expect = 2.640e-93
Identity = 149/272 (54.78%), Postives = 190/272 (69.85%), Query Frame = 3
Query:  282 LIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAFGGFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVENSSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGLSM 1097
            +I+TF+TRD+DVFICTYVK+GTTW QQI+ +L N GE+  +SY E VPWLEA A    L   EA G+T+ESI A  + RFFK+HA   DLP GKAPG KVI + RNPKD  VSL HHA +KP FGY G+F+  L+ F  G  ENGSWF HV+EW+ AS+ADP+HVL+L YE M+ D   +V KIA F G+    +++ KTV NS++ +M+       +   A+    HLRKGG GGWRD FTV QS+  D VY ++MAG+GL  +FGEGL+M
Sbjct:    1 MIDTFETRDTDVFICTYVKAGTTWAQQIVTLLCNGGEQGDKSYGEQVPWLEALAAPETLAEREAPGYTLESIDAMADPRFFKSHATFGDLPRGKAPGVKVIAIARNPKDTVVSLFHHASSKPEFGYKGDFTTFLKVFLSGNAENGSWFKHVVEWHAASRADPDHVLWLTYEAMIDDHAGSVAKIAAFLGLPDAGDVVAKTVANSTMKSMQ-------ANKKANIGMNHLRKGGVGGWRDYFTVTQSNLFDAVYAQKMAGTGLAFNFGEGLTM 265          
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Match: D7G0M1_ECTSI (Aryl sulfotransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0M1_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 5.730e-93
Identity = 150/283 (53.00%), Postives = 190/283 (67.14%), Query Frame = 3
Query:  264 EGVLNELIETFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAAAF------GGFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYVCRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLEWYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKT-VENSSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVYLEQMAGSGLEMDFGEGL 1091
            E   NELI TF+TRD DVF+CT+ KSGTTW QQII +LLN G +  ++Y+E VPWLE   F      G  +   EA  WT++ + + P +RF K+HANL DLP G A G KVIYV RNPKDV VSL+HH KNK    + G+ S+++R F +G   NG WFDHVLEW+EA+ ADPEH+LFL YE M+A+P  +++KIADF+GI+ TP+I+ K  + NS                     K+HLRKGGAGGWRD FT  +S   DR+Y EQM GSGL+MDFG+GL
Sbjct:   15 EDATNELIRTFETRDDDVFVCTFCKSGTTWVQQIITLLLNGGVQGEKTYSETVPWLEWLTFKFAENDGPAVRYKEAQNWTLDKLKSTPNRRFMKSHANLTDLPVGSAMGLKVIYVARNPKDVVVSLYHHIKNKCPHTFSGDMSDMIRCFVQGREMNGPWFDHVLEWWEAANADPEHILFLHYEAMLAEPQEHIRKIADFAGIKHTPDILAKANIYNS---------------------KKHLRKGGAGGWRDAFTKVESEAFDRIYEEQMEGSGLQMDFGDGL 276          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2724.7449.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K098_9PHAE2.260e-15471.30AST protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G187_ECTSI3.060e-10953.05Aryl sulfotransferase n=2 Tax=Ectocarpus TaxID=287... [more]
D8LHM0_ECTSI2.920e-10650.91Aryl sulfotransferase n=1 Tax=Ectocarpus siliculos... [more]
D8LJX5_ECTSI1.590e-10452.87Aryl sulfotransferase, C-terminal Aryl sulfotransf... [more]
A0A6S9GU12_HETAK3.090e-9852.68Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V3BMT7_HETAK1.130e-9753.85Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6V1XC27_HETAK3.010e-9752.84Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XZC3_9STRA6.820e-9653.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
F0YEU1_AURAN2.640e-9354.78Sulfotransfer_1 domain-containing protein n=1 Tax=... [more]
D7G0M1_ECTSI5.730e-9353.00Aryl sulfotransferase n=1 Tax=Ectocarpus siliculos... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2724contigH-paniculata_contig2724:9340..18616 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.0
Seed ortholog evalue2.4e-93
Seed eggNOG ortholog2880.D7G187
KEGG koko:K01025
Hectar predicted targeting categoryother localisation
EggNOG free text desc.sulfotransferase activity
EggNOG OGsKOG1584@1,KOG1584@2759
Ec32 ortholog descriptionP-loop containing nucleoside triphosphate hydrolase
Ec32 orthologEc-01_008810.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons7
Model size2660
Cds size960
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2724.7449.1prot_H-paniculata_contig2724.7449.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2724 10900..18476 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929820.5078268-UTR-H-paniculata_contig2724:9339..108991622929820.5078268-UTR-H-paniculata_contig2724:9339..10899Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2724 9340..10899 -
1691481026.0031617-UTR-H-paniculata_contig2724:9339..108991691481026.0031617-UTR-H-paniculata_contig2724:9339..10899Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2724 9340..10899 -
1622929820.7083974-UTR-H-paniculata_contig2724:18476..186161622929820.7083974-UTR-H-paniculata_contig2724:18476..18616Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2724 18477..18616 -
1691481026.089877-UTR-H-paniculata_contig2724:18476..186161691481026.089877-UTR-H-paniculata_contig2724:18476..18616Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2724 18477..18616 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929820.5270712-CDS-H-paniculata_contig2724:10899..111211622929820.5270712-CDS-H-paniculata_contig2724:10899..11121Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 10900..11121 -
1691481026.0203578-CDS-H-paniculata_contig2724:10899..111211691481026.0203578-CDS-H-paniculata_contig2724:10899..11121Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 10900..11121 -
1622929820.5433176-CDS-H-paniculata_contig2724:12690..128651622929820.5433176-CDS-H-paniculata_contig2724:12690..12865Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 12691..12865 -
1691481026.0301092-CDS-H-paniculata_contig2724:12690..128651691481026.0301092-CDS-H-paniculata_contig2724:12690..12865Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 12691..12865 -
1622929820.5632758-CDS-H-paniculata_contig2724:13783..139081622929820.5632758-CDS-H-paniculata_contig2724:13783..13908Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 13784..13908 -
1691481026.0394073-CDS-H-paniculata_contig2724:13783..139081691481026.0394073-CDS-H-paniculata_contig2724:13783..13908Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 13784..13908 -
1622929820.579849-CDS-H-paniculata_contig2724:15227..153351622929820.579849-CDS-H-paniculata_contig2724:15227..15335Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 15228..15335 -
1691481026.0497-CDS-H-paniculata_contig2724:15227..153351691481026.0497-CDS-H-paniculata_contig2724:15227..15335Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 15228..15335 -
1622929820.5928547-CDS-H-paniculata_contig2724:16284..163801622929820.5928547-CDS-H-paniculata_contig2724:16284..16380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 16285..16380 -
1691481026.0617244-CDS-H-paniculata_contig2724:16284..163801691481026.0617244-CDS-H-paniculata_contig2724:16284..16380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 16285..16380 -
1622929820.63243-CDS-H-paniculata_contig2724:17819..179301622929820.63243-CDS-H-paniculata_contig2724:17819..17930Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 17820..17930 -
1691481026.0703583-CDS-H-paniculata_contig2724:17819..179301691481026.0703583-CDS-H-paniculata_contig2724:17819..17930Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 17820..17930 -
1622929820.678979-CDS-H-paniculata_contig2724:18353..184761622929820.678979-CDS-H-paniculata_contig2724:18353..18476Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 18354..18476 -
1691481026.079835-CDS-H-paniculata_contig2724:18353..184761691481026.079835-CDS-H-paniculata_contig2724:18353..18476Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2724 18354..18476 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2724.7449.1

>prot_H-paniculata_contig2724.7449.1 ID=prot_H-paniculata_contig2724.7449.1|Name=mRNA_H-paniculata_contig2724.7449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=320bp
MSFRDVSPREKGKLVLWPLQVKEVNYELITCRGIPQNNSHDEGVLNELIE
TFKTRDSDVFICTYVKSGTTWTQQIINVLLNKGEKTSRSYAEAVPWLEAA
AFGGFLGGIEATGWTMESIAANPEQRFFKTHANLKDLPCGKAPGAKVIYV
CRNPKDVCVSLHHHAKNKPMFGYDGEFSNILRFFAEGTCENGSWFDHVLE
WYEASKADPEHVLFLRYEDMMADPISNVKKIADFSGIETTPEIIEKTVEN
SSLSAMKKVAAPVKSEAAASHFKEHLRKGGAGGWRDVFTVRQSSELDRVY
LEQMAGSGLEMDFGEGLSM*
back to top

mRNA from alignment at H-paniculata_contig2724:9340..18616-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2724.7449.1 ID=mRNA_H-paniculata_contig2724.7449.1|Name=mRNA_H-paniculata_contig2724.7449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9277bp|location=Sequence derived from alignment at H-paniculata_contig2724:9340..18616- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCAGCACGGATAAACGACGACGCTGTCACTGTCCTGTCCGTGCTGTCTGC TGTCCTCAATCCCGTAAGAAGCTCTTATCTCATTGGCCGTCGTCGATTGA GCTGAGCTCACAGGCGTGCTGTCGGATACTGTAGCAAACTATGTCTTTCA GAGATGTGTCTCCTCGCGAAAAGGGCAAGCTCGTCCTGTGGCCGCTACAA GTCAAGGAGGTGAACTACGAGCTCATCACTTGCCGCGGGATTCCTCAAAA CAATTCACACGATGTAAGTGGGCGACTCTGGCTGCAAAGATCACCTCCGC TCCCCCATATGTGATTGTGGGCGGATGAATTCGCGCTGTGCAATGGAAGG AAACGTTTCGTCGAATATATCCGTGTCATTGTACTGTGCCGTACAGCCTT ACTCATGGTGACACTGATTTTGAACCGGCACTCACTTGAAGGATGATCCG TTGATCCGCTCAAGGTTTGTTCCGTCACAATCACCACCTTGTATTTCGTG CTCAACCGGTCAATGCATGTTTCACTCGCCCATTGAACCTACCCTGCCGT ACGTACCAACTATCTTTTCAAAGTGCAGCACACGGATAGCATAGCGGTAC GTGGCACGCTTGTTTGGTTCCACTGTAGAATTGTGAAAGGTTTCTCTTGG GCTCATGTTGTAACCTGTCTCTGGTGATGGGAGCAGGAGGGCGTGCTGAA CGAACTGATCGAGACGTTCAAGACGCGTGATAGCGACGTGTTCATCTGCA CCTACGTGAAGTCTGGGACGACCTGGACGCAACAGATTATAAATGTGGTG AGTATGAAGTGTGTGTGCCTACAGATGTCATTGTCTCGTGGTAAATATGC TCCCGACTGACCTGCACTGCACTATAATTGTACAGTCGAACACCACCGTC ACGTCGATCTCTGCTCCCTAGTCACGTGTTTTAAATTATACAGACGGTAT TTATCTACACTACCTTCTCCGGTTTTTCGCTGTCTGAGGTTTGCAGGTTG AGCCATGGAAGTAACGTGCCGTGCTTGCAGCAGATGATTTGACCTTCAGA GCGCTTAAATTGCCATCGTAGTACACACTTCCCTCACCTCCTGTGGCGTA GAGGCGTAACTGCAGTTGCCTATTCTTGCAACAGGATTATAAGTACACTA TTAGAGTTTCAATCCTCTTTATACCCAAGTTCCGTACATGAGCCGCAGCA TGGTGAATTGTGGTGGGACCGAAGCTGCGGTTGGATCAGTACAACTACCC GGTTTCGGTGCAGAGCAGAAAACTTGATCTACTCAAGATCACTTCTGCAG GTCGAAGCACAGTCATCTTGTGTTCAATGCCCCCTTCTGTCATTCGTTCG CAGCAAAATAAATGATTTCGGCAGAGAAGTCAACGAAAACTCTTCTGTGT AAGTCGCCTTGATCAAGAATCTGGGTCGTTTTAACATGTCGAAGCACACG GCTAGGGTGTGTGGCTGACAAAACGGGGGGGGGGAATGCACAGAGCTTAG AAGCATGAGTTCATGTTCAAATCTCTATTCACAAACGACGTCGCGGATAT CTCGCGTTATGCCCGTTCTTGTGCGATGCAGCATACATCCACCTCGAACT CGCCCGTGAATATGTGGGGATCAAGGATTTCGACGCATTGGGATTCCGCT TGGTTGTACCCCAACATGTAAACTTCATAGAACTTTGATTCTCGACATTC CCTCTCTAGCATTAGAAATCTTATATACAACGTTGGGTGTGTTGGTTTAG TACGTAGACCACGAGCGTAACCGTTGCTGTGTTGAAGACGGGAAAAAGAC CGTTACACCGCATTTTCAATGCAAAGATCCCTCCTGCCGTGGCAATATAC CAGGCTCTTTCAGATTCTCCGACATAAGACCTAAAGGTCCGCCCACCTTA AGATTTCTCGGTTCGGGATACGTTCAAAAAAGATGGCGGTCCTGTTCTGT CTACTACCAGCGTACGAGGCGAACATAGGTCAGTACAAATATATTTAAAC AGGCAGCATGGACAATGGGTACAGTTGGTACAAAAGAGGAACAAGAAAAA ATATGAGGAGATAGGAAAATACACGGGAGATTTTGGAATGCTTCATCGCA GTCGTGGATTTTGGGGTATTAACAGAGCTGTTTTGAATCCGTTTCAAATA TGTGAATAAACTGCCAGATCCGCGTTCGCCAGCTTTACACACCGGAATGT GCGAACTCCTCCCTTTGCTCTTGAATTGTTTTTCAGCTACTGAACAAGGG AGAGAAGACGTCAAGGAGCTACGCAGAGGCTGTTCCGTGGTTGGAGGCTG CTGCCTTTGGGGGATTTCTCGGTGGTATTGAGGTGAGTGATGAGCTCCCT TGGTGCTATTACATGCGCTTATGTCTTGTGTTTGCCATTATTTTAAATGG CACAGCACCGTAATAAAAGTTGTTTAGCCCTTGATGACTGATGAAATTGT CAGAGTTGCAAGAAGGAGGTCTCGAGATGGCGCAACGGGCGGTTTATATT GACTCCAAATCTTGTTCTAATGATTGTGTTGACTTCGTAAACGTACTGCC AGCTATGGCGATGATATGAGACGAAAAACATGAGTTCATACGAGAATGAA ATTGACGTGTGCCAGTAGCTGCGAAAAAACGTGTGGTGCGGTTTCATCGG ACGGCAGCCTTATTGGATAGACATGACTGTTTTTGGTCAACACGTGCGTT TTGAGAGAATATTCCAAAATTGCAACACACTGGAGATAATTTCGATAGCA TTCCTGCCCCCTGCCTCCTGTTCCTGGAGACTTGGGGGTTACTTTGCCTT TCCCTGTGCGAAGAATCACTGCTGCGAATCATGCCCATTACTTCTGCTCC GTTTCCTGGTGAAATGGTCCCAAAATTTTACTGAGAGCGGCAATACTGCG ATTTGGTCAAAAATGCTGCAGCATGGTCGTTTGCCGTGTGCCGTCCTTGT CGCACTTCTTGTCAAACGTTACTTCAACAAATCCCGCGTTCTCTCAACAC TGGTAGGACCGTTTAGCGTGTGGAGCACCTCAAAACAAGGCATACTGCTG TTGTGAATGATTCCATACACCTTGAACTCAAGTTGACCACGTGGTCACAG AAGTTAGGAGGAAGAACATTAAAATGTACTGTGGTATCCGTCTTGAATGC AATTCTCGGTACCACAGGTAACGGTTGAATTGTGAGAATGTCCAACGCAC AATTTATACCCCCAATCTAACGGTTGAAAAACATGAAGTTATCGATTCAG TCACGTGGCTTTCCTATACCTCACGGCACAGGCGACGGGATGGACCATGG AGTCGATTGCTGCTAACCCTGAGCAACGCTTCTTCAAGACTCACGCGAAC CTCAAAGATCTTCCCTGCGGCAAGGCACCCGGAGCAAAGGTGATTGTGAC ACACATCTTGCTTTAAATTGGAAGTGACGTATGTGTGGTTAGTTGGTGCT ACACTTTTGTAATCCCTGTAACGATTGCCTTGCAATATCGGGTACCGGTA GTAGTCAAGGTGACGCTATGCATGTAGAATACGTACACCTGCTACTTCGA ACTTTTTTTCAGCTAAATGGTCATAATAGTTGAGCCGTCCCTGAAATTGT CTACGTTTTTCAGGGAACGGAACCCATGATCTTCAAGACGCTCCTCTATT TTGTGCTTTCATTCGATGTCATAAGAACCCCAGTGAGGCCATATGGATCC GAAGATGTAGTTTGTAAGGGCGTCAAAATATCATGTCAGTAAGGGCCTTG CTGTTTGTCTTCTGTTTGTCTTCAATTACAAGAAGAGGGTAATTTTTTGG CGATTCTCAAGCGACTACGGCATGGAACCGTAGCATCTACAACTGTAAGG TGACGGCACGTGAGGGCTGAGATTTGGACAGGACGAGACAGGACGCAAGA AAACAGCGTGAGGTGTTTCACACTCTGTGGTACACCTGAAATCATGTGTT AATAACAGCCGTCATGGTTGCGTCGATGACTTGTCGGAAGATGAGAGGGT GTCGGCAAGTTCTGGTGTAATCAAAGCATTGTTGCCTGGCACGTAAAACC GACTCGATTAGTTGTGCACCCCGTCATTATCCTGTATTTGTGAAGTTTTA CCCTAACCTGGCGTACATAACACATGCGATCACTTTTTTCTGGTACCACG CTTTTTGAGACTACGGCACTCCTTAGGGAAGCCAAGGGTCGCCTCGCTGA CACAGCACCGTCGAGGTCTCTCATCTACTTGGTTCTATATGCGACCATGG AACATTCACAAGACGTAAGGAACAGCATAGTCATCCCGTCCCGTCCCGCG ATGAGTGCGAATATATGAAGAAGATGAATTGTCCCGTGTATTCTTATGAT GTTCTCCCCCTACCCCGCCCCGTGGTCCCGTAGTAAGCCCTGGTTATGAG ATTGACATGCTCTTTGAGAAAGGAATATCTTACTTTGAAAGAAAACGGGT TTGAAAATAGTCTACATTTCCCACCCGGGTGATCTACTACACGCCGTAGA CTAAACTACTCGTTTTTTTTTTTAACTCAACGTAGGCGTTCCTAATGCAA TAGTGTAAGTAGCACCCCACCTTCTCGTACAAATCACCACTTTATAAAAA ATCTTATATTGGGGAGAATGGTACGCTGCCTGTTGATCATTTATCGTTAC CCCTCTCTTGCTTCCCCTCGAAACCCTCCGCGTATCTTTTGAACCTCTGT GGTGCCAGGTGATATACGTTTGCCGGAATCCGAAGGACGTATGCGTTTCG TTGCACCACCACGCTAAGAACAAACCAATGTTCGGGTACGATGGGGAGTT CAGCAACATTTTGAGATTTTTCGCGGAGGGAACGTGAGTGTCGGGATTAC ATTGGAAAGCATAGCCAGCTTTTCTTCATGGATATTAAGAAAACAAGTCG ACCGGAAAATGATGTTTTTTGAGTATCACACGCCTTCTTCGCATATAATC GCATAACAATCGACCGTTTTTTGCCGAAGGTTTGTCGGCATCAAACTATC TTCCTGTTCCGTGGTGCTGCCTTCCCCCGCAGCCGGTTTTGTTCTGTAGT TTCGTTCAGACCGAGTTCTGCGTGTTGTATACGAAGTCTTGGAAATTGAA TCATTCTTGTGATGAGATCATATAAACAGTTCCCATAATTACGTGCAGAT TTTTCAAGATAATGAAATAACCCGTCAAGGTCACTGTAGGTACGCTCACT GTCCATCGAGATGAAATTCCCTGTGCACAGTACCATGTCGGGCTGGTGGT ACACGATATCCTCAATGTTGAGCTATAGCGTGGTATACGAGAACCCGGTG GTTATCACACATAATCGAGGGCGTCGCTTTCTTGAATAATCAAACGTAAA CCCTTGTGCAGTGAAATAGATTTGGAAATAAGCGAATATGTTGAGAACTC GGGGTGGAGATGCTGGGTTTCTTGGGTTTCTTCCACTCGAAATCCATGTG TTTTATAGCCAGCTACCTACGCTACGTGCAGCAGTATGATACCTGTGTAC TCTAGTCAGTCGCTGCTGAAGCTTACTCAAGTACGACCGATTTATCTGCA CTGATGGATAGCGTGAACTGGATGGTGAAAGTTGTGGTATTTAGGGGTAC GCTGACCCTTTCACAGCAGTGCCCCGAAAGTACTCTGTGATGTCCTACCC CTAAATGTATTTTTTAGTCATCACCTTGAAACGAAATCATACCATTACTA GACGGGTCTCTGTGGCCTTTGTTCTCCTATTGTGCGTGCGTGCTCCCTCA GTTGTGAGAACGGCTCATGGTTCGATCATGTGCTGGAGTGGTACGAGGCT TCGAAGGCAGACCCGGAGCACGTCTTGTTTCTTCGCTACGAAGACATGAT GGCCGATCCCATCAGCAACGTAAAGAAAATTGCCGACTTTTCGGGCATCG AGACTACACCAGAAATCATCGAGAAGGTGCGTAAGCAAACGCGCCCCCAC GAACGGGTATCTTTCTTGTCCACTGAAAACTATTAATTGCTTATGAATCA ATATTGTCCACGATTATGTTTGGAGAGTGCCCCCTCGTTGTCGGATTTCT GGTATCGCTTGCTGTGTAGAAGAGAGTATTTTCCGTGGAGTATTGCGGGT ACAGCTAGAAAAAACTTGAACGGTTGAAGTGTTGTCTTGAATGGACATGA AGTACCCAGTCAAGCTCTGTATATATTTTTCGTGTAATGAAATGCTGGTT CGTGATCTTCTGTGTGTCATTGATCTTGTAGAGAGCTTTGCCCAGTATTG GGCCCCCGTTAACCCAGCTAGCAGAGTGCGCCCATGATTTCAGCAATTGA GAAGAGAATGAAGGGGAGATGAACAACTTATTTGAGCATCTAGAAAAAAG AAGGACTTTTTGCTGTTCGTGGTTGCAGGTCCCCAGCAAATGATGACCTC TAAAGTACTCAGCCCAGCAAACGATGACCTCTAAAGTACTCAGCCCAGCA AACGATGACCTCTAAAGTACTCAGCCCAGCAAACGATGACCTCTAAAGTA CTCAGCCCAGCAAACGATGACCTCTAAAGTACTCAGCCCAGCAAACGATG ACCTCTAAAGTACTCAGCCCAGCAAACGATGACCTCTACAGTACTCAGCC TAGCAAACGATGCCGCACACGATTTTTTTCCAACATGTACAATCTCTTAC GCGAAGATTAAGGGATAGAGGCCCGAGATATGTTTTAGTCATATGTCTCA GGTTTGTTCGGGACCCCGTCCTCCCTTATCGCGGTGGTTCACGGTTATAC CGTCAGATTCCTTCGCTGTTCTTCTCGAGGTCCGGTGCAATTGGGGTTGA TCGCAACAACGTCTCATAACAAAGTAAAGCATTGTAGGCTAATTCTATAG TATTCCATCTCGAGGAGACTTTAGGAAAACCTCAACTAAGGGGTTATCCC CCGCATCTCGCCAGGAGGGGATCTTGCTATGGTGTGCCCATTGCCCTAGT GTTGCACGGAAGATATGCGATCTTCCTTTCTGAACCAAATATTTGAAGGT GATTTGCGGATTTCTCCACGGGACGCGTTTTTATTTGTAATTCTCAACAG GACCACATAATAATACGTGCGCTGGGTAGATGGATGTAGTGTTGAGAAAC GAGGATGATATAGATATCGCGTATTTGTATGCTTTGCATCTCTCCTGGTA GGGTTCGCAGCGTTCTCGAATTCATCTAACTGGCTCCGTGTCTTGTGTGG AGCACTGAGAAAAGAAGGAACCGGTCAGGTGCAACACTGAGGTTGTTGCC TACAAAGTAATGGTGTTGAAAACATTATACCGCGTTTCGACTTTCAGCAA CAGGACGACACTTTTTTTTGTTCACAAGCTTCAATTACTTGCCTACATCT AGAAAGAAAAAATGTCTTGTCGTGCAGAGGCAATCGTCGGAAAAGACTTG ATCTCCTTCCTCTCGAGGATGCATGGTCAATCGTTCAACACATTCGACTC GGAAACATGAGAACCCCCGCGCCCCCTCCCCTCTCGCAAACGCAGACGGT GGAGAACAGCAGTCTCTCAGCGATGAAAAAGGTTGCCGCTCCGGTAAAAT CAGAAGCTGCTGCTTCGCACTTCAAGGAGCACCTTCGTAAGGGCGGGGCT GGAGGGTGGCGAGATGTATTCACTGTGCGGCAATCGTCTGAACTAGACAG AGTTTACCTTGAGCAGATGGCGGGCAGCGGTCTGGAGATGGATTTCGGAG AAGGGCTGAGCATGTAATTCGTGCGGAGGCGGGGGTATGGCCATGATGGG AGATTTTGTAGCTGTGTATCGTGAAACTGTTCGGCCCATGCATACCTTAT ATTCCTTCGCCAGACGATATTAGCTAGGGGGAGGGAGGAGGTGTACCTAT TGCGCATGTCTCAGACGTCAGAACAATGACGGAGATAATTTGGACAGGCG GACAGGGGCGGAGCACAGACTTTTTCCCTTCACGATTTGAAAGAAGGAAA TATGGTGCCGTGTGTGCTTGTATTTCGTTAGCATGTGTTGGGTTTTTTGC TCTTGCTTAAATTCAAGGAGTAAGTGTCAGTTCGAATCCTGTCCTTTTTG GGGCATAGGTTTTCGTCGTGCGCTCGCTGCCCTGTTGGGGATACTTTTGT GTTTGTTTTTTTTCCACCTGTGCGACTCAGTATGGAGGGGTGGCTGTAGA CATTCTACTATATACACGGACACCGACGATTTCTCAGAGGAGCGGTTGTG CTCTGCATCTTGTAGCCGATTGTATTGTTGACGTTACGTTTTGAGCGTGT GGAGTGTCTGGCAGTCATGATGCCCCCTGCTCCTCCGGGTAGCGTACGTC TCGCGCAGTTTGTGAGTTGCGCCTCTGGTTTTGGATCACAATTTTTCTAG TATAATGAAGTGGACTACTCCCGTCCAATATATTGGATTAAATTATACGT AAGGTCTGATGAATCCGGATTGCCAGCTACAATACTGCAAAAATCTTATT TTCTGGTGCTGGTATTATTCTGTGTTTTCGCGACGCGATGGTCTGGGTCC ATTACGTGTTTGCAGCTGCCGCTGCGTCCATCTTATTCTGAGGGAAAGGA AAAGGTGTGCAGGGATATGCGAATTGCCCCCCCCCCCCTAGTATCGTGTT TAGAGAAAAATTGTTTTTGGAATGGGCATCATTTGGTCGTGAGTGAGGTA TGTTGACTGATTGGTATTGTAATGCTGTTTGTTCAAGAAACAACAGGTGC TGTTGGTGTTGCAAAGTATTCAAGGCGGGAGTGGAGGTGATGTCTCAAAA TGTTGAATAATTGAAACAAAGGGGCTGTGGTGGAATGGCTATAAACACAA AATTCGCTATTTCCAGTTGGCGCACAATCGAAAGTTGGAGTAATCAATTT GGTGAAAAAAATCGGTAAAGCATTCGATAAATAACTTTCACCTTATTGGC TGTCTGTTCCCGTCATGGATATTGTGGGAAGGGGGGAACGTTACTCTTTT GTGGAACTTGTTCATGAAAAGAGCGAGCCATAGTGACCGCATGACTATTC AAAGCTCAACATCGTGACCGGCACCATGTCGATCAGTTTGTATATGAGTC GAAGGTTTCGTGAAGTCAAGTTTGTTGTACAATACAAACAAAACCCCACT TGAGACCGTTGAAACATCATGATCGTCTGTGAAGCCTTTTGAAGCGTCAT TGGGAAATTACAGAGTACGATGATCTGTTTCATCTATCAAATGGAAACAA ACAAATCAGGAACAAACTATGAAGCTCATGCGTATTTTAACCTATCTGTG TATAATAGATCCGTCCATAATGACTAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig2724:9340..18616-

>mRNA_H-paniculata_contig2724.7449.1 ID=mRNA_H-paniculata_contig2724.7449.1|Name=mRNA_H-paniculata_contig2724.7449.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1920bp|location=Sequence derived from alignment at H-paniculata_contig2724:9340..18616- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTTTCAGAGATGTGTCTCCTCGCGAAAAGGGCAAGCTCGTCCTGTG
GCCGCTACAAGTCAAGGAGGTGAACTACGAGCTCATCACTTGCCGCGGGA
TTCCTCAAAACAATTCACACGATATGTCTTTCAGAGATGTGTCTCCTCGC
GAAAAGGGCAAGCTCGTCCTGTGGCCGCTACAAGTCAAGGAGGTGAACTA
CGAGCTCATCACTTGCCGCGGGATTCCTCAAAACAATTCACACGATGAGG
GCGTGCTGAACGAACTGATCGAGACGTTCAAGACGCGTGATAGCGACGTG
TTCATCTGCACCTACGTGAAGTCTGGGACGACCTGGACGCAACAGATTAT
AAATGTGGAGGGCGTGCTGAACGAACTGATCGAGACGTTCAAGACGCGTG
ATAGCGACGTGTTCATCTGCACCTACGTGAAGTCTGGGACGACCTGGACG
CAACAGATTATAAATGTGCTACTGAACAAGGGAGAGAAGACGTCAAGGAG
CTACGCAGAGGCTGTTCCGTGGTTGGAGGCTGCTGCCTTTGGGGGATTTC
TCGGTGGTATTGAGCTACTGAACAAGGGAGAGAAGACGTCAAGGAGCTAC
GCAGAGGCTGTTCCGTGGTTGGAGGCTGCTGCCTTTGGGGGATTTCTCGG
TGGTATTGAGGCGACGGGATGGACCATGGAGTCGATTGCTGCTAACCCTG
AGCAACGCTTCTTCAAGACTCACGCGAACCTCAAAGATCTTCCCTGCGGC
AAGGCACCCGGAGCAAAGGCGACGGGATGGACCATGGAGTCGATTGCTGC
TAACCCTGAGCAACGCTTCTTCAAGACTCACGCGAACCTCAAAGATCTTC
CCTGCGGCAAGGCACCCGGAGCAAAGGTGATATACGTTTGCCGGAATCCG
AAGGACGTATGCGTTTCGTTGCACCACCACGCTAAGAACAAACCAATGTT
CGGGTACGATGGGGAGTTCAGCAACATTTTGAGATTTTTCGCGGAGGGAA
CGTGATATACGTTTGCCGGAATCCGAAGGACGTATGCGTTTCGTTGCACC
ACCACGCTAAGAACAAACCAATGTTCGGGTACGATGGGGAGTTCAGCAAC
ATTTTGAGATTTTTCGCGGAGGGAACTTGTGAGAACGGCTCATGGTTCGA
TCATGTGCTGGAGTGGTACGAGGCTTCGAAGGCAGACCCGGAGCACGTCT
TGTTTCTTCGCTACGAAGACATGATGGCCGATCCCATCAGCAACGTAAAG
AAAATTGCCGACTTTTCGGGCATCGAGACTACACCAGAAATCATCGAGAA
GTTGTGAGAACGGCTCATGGTTCGATCATGTGCTGGAGTGGTACGAGGCT
TCGAAGGCAGACCCGGAGCACGTCTTGTTTCTTCGCTACGAAGACATGAT
GGCCGATCCCATCAGCAACGTAAAGAAAATTGCCGACTTTTCGGGCATCG
AGACTACACCAGAAATCATCGAGAAGACGGTGGAGAACAGCAGTCTCTCA
GCGATGAAAAAGGTTGCCGCTCCGGTAAAATCAGAAGCTGCTGCTTCGCA
CTTCAAGGAGCACCTTCGTAAGGGCGGGGCTGGAGGGTGGCGAGATGTAT
TCACTGTGCGGCAATCGTCTGAACTAGACAGAGTTTACCTTGAGCAGATG
GCGGGCAGCGGTCTGGAGATGGATTTCGGAGAAGGGCTGAGCATGTAAAC
GGTGGAGAACAGCAGTCTCTCAGCGATGAAAAAGGTTGCCGCTCCGGTAA
AATCAGAAGCTGCTGCTTCGCACTTCAAGGAGCACCTTCGTAAGGGCGGG
GCTGGAGGGTGGCGAGATGTATTCACTGTGCGGCAATCGTCTGAACTAGA
CAGAGTTTACCTTGAGCAGATGGCGGGCAGCGGTCTGGAGATGGATTTCG
GAGAAGGGCTGAGCATGTAA
back to top