prot_H-paniculata_contig2724.7448.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2724.7448.1
Unique Nameprot_H-paniculata_contig2724.7448.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length275
Homology
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: D7FQI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQI6_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.590e-44
Identity = 78/110 (70.91%), Postives = 95/110 (86.36%), Query Frame = 0
Query:  134 LEAAHEARVLVVGKGVLLSATVTSCDKVIVEGLFKGTITTGVFVLAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQLMHFSS 243
            L A HE RVLVVGKGV+L+A VTSCDKV+VEG F+G I TG FVL+EGGQMEGEV C +G IGG+MKATI+ASK L+IG+ A+V GD+VY+SL++LDGGRLQG+L H+SS
Sbjct:   89 LAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIKTGTFVLSEGGQMEGEVRCSDGCIGGNMKATIIASKTLLIGKAAVVTGDMVYDSLQVLDGGRLQGKLTHYSS 198          
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: A0A6H5JYZ3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYZ3_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 5.630e-42
Identity = 77/115 (66.96%), Postives = 96/115 (83.48%), Query Frame = 0
Query:  129 ASTSSLEAAHEARVLVVGKGVLLSATVTSCDKVIVEGLFKGTITTGVFVLAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQLMHFSS 243
            A    L A HE RVLVVGKGV+L+A VTSCDKV+VEG F+G I TG FVL+EGGQMEGEV C EG IGG+MKATI+AS+ L+IG+ A+V GD+VY+SL++L+GGR+QG+L H+SS
Sbjct:  210 AEEGVLAAKHEERVLVVGKGVVLTANVTSCDKVVVEGNFQGNIETGTFVLSEGGQMEGEVRCSEGCIGGNMKATIIASETLLIGKAAVVTGDMVYDSLQVLEGGRIQGKLTHYSS 324          
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: A0A537QTF7_9PROT (Polymer-forming cytoskeletal protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QTF7_9PROT)

HSP 1 Score: 65.1 bits (157), Expect = 5.200e-9
Identity = 43/139 (30.94%), Postives = 67/139 (48.20%), Query Frame = 0
Query:  106 EPYRVVKEANRPG-----RYRNMPTPRAASTSSLEAAHEARVLVVGKGVLLSATVTSCDKVIVEGLFKGTIT-TGVFVLAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQL 238
            EP+    E +RP      +    P PR  ++       EAR LVVG G+ +S T+TSCD+++ EG     +      ++A+ G   G V  +   + G  +  +V  K L++     V G V Y  +EI  GGR+ GQ+
Sbjct:   14 EPFWKTSEPSRPSDALPAQREAEPDPRPRNSQI-----EARTLVVGAGMSVSGTITSCDRLVAEGTVDAKLDGCQQVIVAQTGVFRGNVSTDHADVHGRFEGELVVQKRLLVRAAGQVSGTVSYGEIEIECGGRISGQI 147          
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: A0A2U1VUT1_9PROT (Uncharacterized protein n=1 Tax=Azospirillum sp. TSO35-2 TaxID=716796 RepID=A0A2U1VUT1_9PROT)

HSP 1 Score: 62.4 bits (150), Expect = 1.200e-7
Identity = 34/109 (31.19%), Postives = 58/109 (53.21%), Query Frame = 0
Query:  139 EARVLVVGKGVLLSATVTSCDKVIVEGLFKGTITTGVFV-LAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQLMHFSSRKP 246
            E R L VG+ ++LS  + SCD ++VEG  +  +  G  + +++GG  +G VE +E  IGG  +  I     L +     + G + +  L +  GG+L G +  +S+ KP
Sbjct:  165 EQRRLTVGRDIVLSGEIGSCDVLVVEGTVEAKLREGRSIEISDGGLFKGSVEIDEADIGGRFEGDIAVRGRLTVRTTGKITGSIRFGELAVEAGGQLIGDIQLYSAAKP 273          
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: A0A4Q5V7D5_9GAMM (Polymer-forming cytoskeletal protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A4Q5V7D5_9GAMM)

HSP 1 Score: 58.2 bits (139), Expect = 5.390e-7
Identity = 34/88 (38.64%), Postives = 52/88 (59.09%), Query Frame = 0
Query:  164 EGLFKGTI-----TTGVFVLAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQLMHFSSRKP 246
            EG  KG I          V+ E G +EGE+      I GH++  I ++K L +  +A+V G+V YES+E++ G +L+GQ MH SS++P
Sbjct:   34 EGSVKGNIYFDDSKPAKLVVTETGVVEGEIHASNVVINGHVRGAIYSTKHLELAAKAVVEGNVHYESIEMVKGAQLKGQ-MHSSSKEP 120          
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: A0A239HT97_9SPHN (Protein CcmA, bactofilin family n=2 Tax=Sphingopyxis TaxID=165697 RepID=A0A239HT97_9SPHN)

HSP 1 Score: 57.4 bits (137), Expect = 8.480e-7
Identity = 32/109 (29.36%), Postives = 60/109 (55.05%), Query Frame = 0
Query:  144 VVGKGVLLSATVTSCDKVIVEGLFKGTITTGVFVLAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQLMHFSSRKPKPAAAP 252
            ++G  V+++  V +   + V+G  +G +     V  E  +++G V  +  ++ G +  +I A K L++   A + GDVVYE++ I +GG++ G+L H  +  P  A AP
Sbjct:   12 IIGSDVVITGNVAASVDLHVDGKIEGDLKCANLVQGEASEIKGAVAADTAKLAGLLDGSIEA-KTLIVHASARITGDVVYETITIENGGKVDGKLTHRRAGAPGMAKAP 119          
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: UPI0016777A2C (polymer-forming cytoskeletal protein n=1 Tax=Cellvibrio zantedeschiae TaxID=1237077 RepID=UPI0016777A2C)

HSP 1 Score: 57.0 bits (136), Expect = 1.400e-6
Identity = 33/94 (35.11%), Postives = 52/94 (55.32%), Query Frame = 0
Query:  164 EGLFKGTITT-----GVFVLAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQLM-----HFSSRKPK 247
            EG  KG I T        ++ E G +EGE+      I GH++ TI +SK L +  +A+V G + Y+S+E++ G +L GQ+        SSR+P+
Sbjct:   36 EGTLKGNIYTEEGKPAKLIVTETGLVEGEIHASNAIINGHVRGTIYSSKHLELAAKAVVEGSIHYQSIEMVKGAQLIGQMYSTVKAQASSREPQ 129          
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: A0A2E5Y0Q4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Marinimicrobia bacterium TaxID=2026760 RepID=A0A2E5Y0Q4_9BACT)

HSP 1 Score: 55.1 bits (131), Expect = 4.340e-6
Identity = 28/95 (29.47%), Postives = 55/95 (57.89%), Query Frame = 0
Query:  144 VVGKGVLLSATVTSCDKVIVEGLFKGTITT-GVFVLAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQ 237
            +VG   ++   +   + +I+ G  KG + T G   +AE G + G +   + RIGG +   +VA+  +++G++++++GD+VY  L I DG +  G+
Sbjct:   12 MVGADAVIDGPINLREGIIIYGTVKGPVNTNGPVRVAENGNVHGNIIGSDIRIGGTVSGNLVAAGQVILGKKSILNGDIVYRKLLIEDGAQFNGK 106          
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: A0A4V1ZQW8_9GAMM (Polymer-forming cytoskeletal protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A4V1ZQW8_9GAMM)

HSP 1 Score: 55.5 bits (132), Expect = 4.950e-6
Identity = 31/88 (35.23%), Postives = 50/88 (56.82%), Query Frame = 0
Query:  164 EGLFKGTITT-----GVFVLAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQLMHFSSRKP 246
            EG  KG I       G  +L E   +EGE+      I GH++  I +SK L +  +A+V G++ Y+S+E++ G +L+GQ+   S+ KP
Sbjct:   36 EGALKGNIHAEDGKPGKLILTETASVEGEIHASNVIINGHVRGAIYSSKHLELAAKAVVEGNIHYQSIEMVKGAQLKGQM--HSTAKP 121          
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Match: A0A0M4D5U6_SPHS1 (Cell shape determination protein CcmA n=3 Tax=Sphingopyxis TaxID=165697 RepID=A0A0M4D5U6_SPHS1)

HSP 1 Score: 55.1 bits (131), Expect = 9.730e-6
Identity = 30/97 (30.93%), Postives = 55/97 (56.70%), Query Frame = 0
Query:  144 VVGKGVLLSATVTSCDKVIVEGLFKGTITTGVFVLAEGGQMEGEVECEEGRIGGHMKATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQLMH 240
            ++G  V+++  V +   + V+G  +G +     V  E  +++G +  E  +I G +  +I A K L+I   A + GDVVYE++ I +GG++ G+L H
Sbjct:   40 IIGSDVVITGNVAASVDLHVDGKIEGDLKCANLVQGEASEIKGAIIAETAKIAGLLDGSIEA-KTLVIHASARITGDVVYETITIENGGKVDGKLSH 135          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2724.7448.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
D7FQI6_ECTSI2.590e-4470.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYZ3_9PHAE5.630e-4266.96Reverse transcriptase domain-containing protein n=... [more]
A0A537QTF7_9PROT5.200e-930.94Polymer-forming cytoskeletal protein n=1 Tax=Alpha... [more]
A0A2U1VUT1_9PROT1.200e-731.19Uncharacterized protein n=1 Tax=Azospirillum sp. T... [more]
A0A4Q5V7D5_9GAMM5.390e-738.64Polymer-forming cytoskeletal protein n=1 Tax=Gamma... [more]
A0A239HT97_9SPHN8.480e-729.36Protein CcmA, bactofilin family n=2 Tax=Sphingopyx... [more]
UPI0016777A2C1.400e-635.11polymer-forming cytoskeletal protein n=1 Tax=Cellv... [more]
A0A2E5Y0Q4_9BACT4.340e-629.47Uncharacterized protein n=1 Tax=Candidatus Marinim... [more]
A0A4V1ZQW8_9GAMM4.950e-635.23Polymer-forming cytoskeletal protein n=1 Tax=Gamma... [more]
A0A0M4D5U6_SPHS19.730e-630.93Cell shape determination protein CcmA n=3 Tax=Sphi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007607Bactofilin A/BPFAMPF04519Bactofilincoord: 144..238
e-value: 8.9E-15
score: 54.8
IPR007607Bactofilin A/BPANTHERPTHR35024FAMILY NOT NAMEDcoord: 144..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2724contigH-paniculata_contig2724:2358..8096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2724.7448.1mRNA_H-paniculata_contig2724.7448.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2724 839..8209 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2724.7448.1 ID=prot_H-paniculata_contig2724.7448.1|Name=mRNA_H-paniculata_contig2724.7448.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=275bp
MKHIKKSFSFSMPGKEITLEDHRGNSSLAGPRSVTPSHKQHSRRSQGARG
RNNWIDSSTGAKSPRYSTGGATESSRSAAVVDQSTPTASLEGTGPSPSPD
TGDREEPYRVVKEANRPGRYRNMPTPRAASTSSLEAAHEARVLVVGKGVL
LSATVTSCDKVIVEGLFKGTITTGVFVLAEGGQMEGEVECEEGRIGGHMK
ATIVASKALMIGRRAMVHGDVVYESLEILDGGRLQGQLMHFSSRKPKPAA
APDEDESSEVAQELTPEVTEETEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007607BacA/B