prot_H-paniculata_contig27217.7445.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27217.7445.1
Unique Nameprot_H-paniculata_contig27217.7445.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A5A7TVE6_CUCME (Integrase catalytic domain-containing protein n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7TVE6_CUCME)

HSP 1 Score: 67.8 bits (164), Expect = 1.360e-11
Identity = 32/67 (47.76%), Postives = 45/67 (67.16%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDFDSD 67
            M++ SLGG  YV+++VDDYSRF  VRF+K KSD      S        KG KI+ IR+D+G++FD++
Sbjct:  103 MQIESLGGKKYVLVVVDDYSRFTWVRFLKGKSDAVKICISLCLNLQREKGKKIIRIRSDHGKEFDNE 169          
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A5D3D755_CUCME (F5J5.1 n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3D755_CUCME)

HSP 1 Score: 65.5 bits (158), Expect = 8.930e-11
Identity = 32/67 (47.76%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDFDSD 67
            M+  SLGG  YV ++VDDYSRF  VRF+K+KSD      S        KG KI+ IR+D+G+ FD++
Sbjct:  528 MQAESLGGKKYVFVVVDDYSRFTWVRFLKEKSDIVKLCISLCLNLQREKGQKIIRIRSDHGKKFDNE 594          
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A5D3DQT9_CUCME (Gag/pol polyprotein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3DQT9_CUCME)

HSP 1 Score: 65.1 bits (157), Expect = 1.210e-10
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDFDSD 67
            M+  SLG   YV+++VDDYSRF  VRF+K KSD      S        KG KI+ IR+D+G++FD++
Sbjct:  353 MKTESLGRKKYVLVVVDDYSRFTRVRFLKGKSDTVKLCISLYLNLQREKGQKIIRIRSDHGKEFDNE 419          
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A5D3CAR9_CUCME (Gag-pol polyprotein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3CAR9_CUCME)

HSP 1 Score: 64.7 bits (156), Expect = 1.630e-10
Identity = 31/67 (46.27%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDFDSD 67
            M+  SLGG  YV+++VDDYSRF  VRF+K+KSD      S        K  KI+ IR+D+G++FD++
Sbjct:  424 MQTKSLGGMKYVLVVVDDYSRFTWVRFLKEKSDTVKLCISLCLNLQREKRQKIIRIRSDHGKEFDNE 490          
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A5D3BA69_CUCME (Gag-pol polyprotein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3BA69_CUCME)

HSP 1 Score: 64.7 bits (156), Expect = 1.640e-10
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDFDSD 67
            M+  SLGG  YV+++VDDYS+F  VRF+K+K D      S        KG KI+ IR+D+G++FD++
Sbjct:  321 MQTESLGGKKYVLVVVDDYSKFTWVRFLKEKFDTVKLCISLCLNLQREKGQKIIRIRSDHGKEFDNE 387          
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A5A7U0C5_CUCME (Gag-pol polyprotein n=2 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7U0C5_CUCME)

HSP 1 Score: 64.3 bits (155), Expect = 2.260e-10
Identity = 30/67 (44.78%), Postives = 44/67 (65.67%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDFDSD 67
            ++  SLGG  YV++ VDDYSRF  VRF+K+KSD      S        KG +I+ IR+D+G++FD++
Sbjct:    4 LQTESLGGKKYVLVAVDDYSRFTWVRFLKEKSDTVKICISLCLNLQCEKGKRIIRIRSDHGKEFDNE 70          
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A5D3E4L4_CUCME (Gag-pol polyprotein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3E4L4_CUCME)

HSP 1 Score: 63.5 bits (153), Expect = 4.210e-10
Identity = 31/67 (46.27%), Postives = 43/67 (64.18%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDFDSD 67
            M+  SLGG  YV+++VDDYSRF  V F+K KSD      S        KG KI+ IR+D+G++FD++
Sbjct:  342 MQTESLGGKKYVLVVVDDYSRFTWVPFLKGKSDTVKLCISLCLNLQGEKGQKIIRIRSDHGKEFDNE 408          
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A225VG75_9STRA (Integrase catalytic domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VG75_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.310e-10
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDF 64
            M+  S GG+ YV++ VDDYSR+  V F+KKKS+     ++Y+  Y    G +I  +R+DNG +F
Sbjct:    4 MKTRSKGGARYVLVFVDDYSRYVVVYFLKKKSEVANKFKTYLTMYENQWGERIKCLRSDNGTEF 67          
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A5D3C456_CUCME (Peptidase aspartic, catalytic n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5D3C456_CUCME)

HSP 1 Score: 62.0 bits (149), Expect = 8.270e-10
Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDFDSD 67
            M+  SLGG  YV+++VDDYSRF  V F+K KSD      S        KG KI+ I +D+G++FD++
Sbjct:  164 MQTESLGGKKYVLVVVDDYSRFTWVLFLKGKSDTVKLCISLCLNLQREKGKKIIRISSDHGKEFDNE 230          
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Match: A0A5A7T7U0_CUCME (Gag-pol polyprotein n=1 Tax=Cucumis melo var. makuwa TaxID=1194695 RepID=A0A5A7T7U0_CUCME)

HSP 1 Score: 62.4 bits (150), Expect = 9.860e-10
Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 0
Query:    1 MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKGLKIVAIRTDNGEDFDSD 67
            M+  SL G  YV+++VDDYS+F  VRF+K KSD      S        KG KI+ IR+D G++FD++
Sbjct:  275 MQTESLRGKKYVLVVVDDYSKFTRVRFLKGKSDTVKLCISLCLNLQREKGQKIIRIRSDYGKEFDNE 341          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27217.7445.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A7TVE6_CUCME1.360e-1147.76Integrase catalytic domain-containing protein n=2 ... [more]
A0A5D3D755_CUCME8.930e-1147.76F5J5.1 n=2 Tax=Cucumis melo var. makuwa TaxID=1194... [more]
A0A5D3DQT9_CUCME1.210e-1046.27Gag/pol polyprotein n=1 Tax=Cucumis melo var. maku... [more]
A0A5D3CAR9_CUCME1.630e-1046.27Gag-pol polyprotein n=1 Tax=Cucumis melo var. maku... [more]
A0A5D3BA69_CUCME1.640e-1044.78Gag-pol polyprotein n=1 Tax=Cucumis melo var. maku... [more]
A0A5A7U0C5_CUCME2.260e-1044.78Gag-pol polyprotein n=2 Tax=Cucumis melo var. maku... [more]
A0A5D3E4L4_CUCME4.210e-1046.27Gag-pol polyprotein n=1 Tax=Cucumis melo var. maku... [more]
A0A225VG75_9STRA4.310e-1042.19Integrase catalytic domain-containing protein n=1 ... [more]
A0A5D3C456_CUCME8.270e-1044.78Peptidase aspartic, catalytic n=1 Tax=Cucumis melo... [more]
A0A5A7T7U0_CUCME9.860e-1044.78Gag-pol polyprotein n=1 Tax=Cucumis melo var. maku... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 2..70
e-value: 2.9E-8
score: 35.4
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..70
score: 9.339
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 4..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27217contigH-paniculata_contig27217:2549..2758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27217.7445.1mRNA_H-paniculata_contig27217.7445.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27217 2519..2758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27217.7445.1 ID=prot_H-paniculata_contig27217.7445.1|Name=mRNA_H-paniculata_contig27217.7445.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
MRVTSLGGSSYVMIIVDDYSRFQAVRFIKKKSDDTAALQSYIAEYIMPKG
LKIVAIRTDNGEDFDSDFFV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR001584Integrase_cat-core
IPR012337RNaseH-like_sf