mRNA_H-paniculata_contig272.7439.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig272.7439.1
Unique NamemRNA_H-paniculata_contig272.7439.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: A0A6H5KRH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRH5_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 2.050e-73
Identity = 209/365 (57.26%), Postives = 238/365 (65.21%), Query Frame = 3
Query: 2394 AEAAKIQTEREERAAVRLQAMARG---RWSAQRAAFVRVVAQRE---------------NAATTVQTSWRQVAVRAKWSRARNGMVALQALCRGRAARQTMAREMPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRESAAVLQELHRRLSQHAAATRIXXXXXXXXXXXXXXXXXXNARARLAEAEDRRRADPSLALGVRIESALKSLEHGTHLTTIIRACITLELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVHKPTKDACNEIKNSQRLDSISDILARKAAAECKS 3434
            A AA+I+  REE AA  LQA ARG   R    RA  V +V QR                 AA       R  + RA   RAR G VALQA  RGRAAR  +  E  A     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E+AA    L RR S+  AAT I                  +ARAR+  A     ADPS  LG R+  AL +LEH THLT IIRACI LEL++RYSKVCC+V+A SR P+VLYDL+RGLNRSPPHQKILKY ITTFRN+ QRG  +P L+AAPP+A ET++DLLQMYRERQEVF+PT RLLQQL+  HKPTKD CN +K+  RL+S+ DILARKAA E KS
Sbjct: 1990 AVAAEIRAAREESAARTLQAFARGTLERAELMRAEAVAIVVQRAWRERLLWRRREREIATAAXXXXXXXRMASARADCRRARRGTVALQAAVRGRAARGALKAERDASTRIIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREEAAARWLVLGRRFSRTKAATMIQAAARGMAARKKTDPGISSARARIERANANALADPSQVLGTRVNDALTALEHCTHLTAIIRACIALELTSRYSKVCCEVMARSRCPQVLYDLIRGLNRSPPHQKILKYVITTFRNIAQRGDGLPALLAAPPVAAETYVDLLQMYRERQEVFLPTVRLLQQLLNAHKPTKDKCNSVKHRPRLESMRDILARKAAVEAKS 2354          
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: D8LLN9_ECTSI (Similar to asp (Abnormal spindle)-like, microcephaly associated n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLN9_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 2.580e-67
Identity = 138/225 (61.33%), Postives = 162/225 (72.00%), Query Frame = 3
Query: 2775 ESAAVLQELHRRLSQHAAATRIXXXXXXXXXXXXXXXXXXNARARLAEAEDRRRADPSLALGVRIESALKSLEHGTHLTTIIRACITLELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVHKPTKDACNEIKNSQRLDSISDILARKAAAECKSSGGRG 3449
            E+AA    L RR S+  AAT I                  +ARAR+ +A     ADPS  LG R+  AL +LEH THLT IIRACI LEL++RYSKVCC+V+A SR P+VLYDL+RGLNRSPPHQKILKY ITTFRN+ QRG  +P L+AAPP+A ET++DLLQMYRERQEVF+PT RLLQQL+  HKPTKD CN +K+  RL+SI DILARKAA E KS   RG
Sbjct: 2254 EAAARWLVLGRRFSRAKAATMIQAAARGMAARKKTGPGIASARARIEKANANALADPSQILGTRVNDALTALEHCTHLTAIIRACIALELTSRYSKVCCEVMARSRCPQVLYDLIRGLNRSPPHQKILKYAITTFRNIAQRGDGLPALLAAPPVAAETYVDLLQMYRERQEVFLPTVRLLQQLLNAHKPTKDECNSVKHRPRLESIRDILARKAAVEAKSIAARG 2478          
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: A0A835Z978_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z978_9STRA)

HSP 1 Score: 148 bits (373), Expect = 4.730e-32
Identity = 87/181 (48.07%), Postives = 113/181 (62.43%), Query Frame = 3
Query: 2898 ARARLAEAEDRRRADPSLALGVRIESALKSLEHGTHLTTIIRACITLELSTRYSKVCCQVIAESR-APRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVHKPTKDACNEIKNSQRLDSISDILARKAAAECKSS 3437
            ARA++  A    R +P   LG R+ +AL  +  GT LT + RAC TLELSTRYS V C V+AE + AP VLY+L+R LNRSPPHQ+ILK+T+ T RN+ +    + GL+AAPP A    LD++QMYR+  E+F+   RL   +VA       A +E + S RL SI   L  KA AE K S
Sbjct: 1593 ARAKVQTANAFARNNPGETLGARVANALAIMARGTMLTKVARACKTLELSTRYSPVSCMVVAEDQNAPTVLYNLIRSLNRSPPHQRILKFTLETLRNIARHNRRLCGLIAAPPGAATVLLDVMQMYRDNPELFLLATRLFTCMVAQIPAFAMAGSEQQASDRLASIEIQLRSKARAEEKRS 1773          
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: A0A7S3YG01_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YG01_HETAK)

HSP 1 Score: 100 bits (248), Expect = 6.310e-20
Identity = 60/178 (33.71%), Postives = 96/178 (53.93%), Query Frame = 3
Query: 2898 ARARLAEAEDRRRADPSLALGVRIESALKSLEHGTHLTTIIRACITLELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVHKPTKDACNEIKNSQRLDSISDILARKAAAECK 3431
            AR R+  A  + RA+P+  LG R  SAL+ L     +T I + C+TLELST YS+ CC+    + A   +++L+R  NRS PHQ++LK+ +    NL  R   + G VA  P   E  +D++Q +RE ++ F+ +  L+  +    +  +      + ++RL  I  IL RK +   K
Sbjct:    6 ARLRVERANAQARAEPAQRLGSRTRSALEQLLATKSVTQIKKCCVTLELSTTYSRRCCESFVFAEAHLRMFELMRSCNRSLPHQELLKHVLRILANLT-RYPHLVGTVAQAPGCVEVLVDMMQFFRELEDTFLLSVGLVATMARSERRIRQQAAAPEIAKRLGGILSILRRKFSLATK 182          
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: A0A7S2EB46_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EB46_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 8.400e-17
Identity = 58/174 (33.33%), Postives = 91/174 (52.30%), Query Frame = 3
Query: 2943 PSLALGVRIESALKSLEHGTHLTTIIRACITLELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVHKPTKDACNEIKNSQRLDSISDILARKAAAECKSSGGRGSPVKV 3464
            P + LG+R +SAL+ L     L  ++RA  TLE+STR S+ CC   A+++AP +LY L+R  NRS PH ++L   + T  N+ +    +  +  A   + E  +DL+QM+R++  +F     LL+ +V         C   +N +RL  I  +  RK     K+  GR   V V
Sbjct: 1108 PQMKLGMRTKSALEILLKSKRLAEVMRAVTTLEVSTRLSEKCCVAFAQAKAPGILYALIRTCNRSLPHMELLHLVLETLTNVAKHSYLIRSV--ATTKSVEVLIDLVQMFRDKDNIFCLAISLLELIVFAVDDCMIRCASRENLKRLKGIHSLSLRKIDMARKTESGRRKSVGV 1279          
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: A0A0L0DQD4_THETB (Uncharacterized protein n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DQD4_THETB)

HSP 1 Score: 95.1 bits (235), Expect = 8.250e-16
Identity = 65/179 (36.31%), Postives = 97/179 (54.19%), Query Frame = 3
Query: 2895 NARARLAEAEDRRRADPSLALGVRIESALKSLEHGTHLTTIIRACITLELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVHKPTKDACNEIKNSQRLDSISDILARKAAAECK 3431
            N R+RL E       D  + LG R ++AL  L    HLT I +AC  LE+STR S VCC  +A + A  +++ L++  NRS PH ++LK  +   RNL  R  T+  LV + P + +  ++L+QMYR++ ++F+    L++ L A  +            +RL SI  IL RKA  E K
Sbjct: 1651 NLRSRLREINASVTED--MKLGNRTQAALAILLTSKHLTHIHKACSNLEVSTRLSFVCCDSLAGNDAVPIIFTLIKSCNRSKPHVELLKIALNILRNLA-RWRTVD-LVLSTPGSVDIIIELMQMYRDKVDIFLRCLSLMRLLAAKRRRAAIIVAVPLAVRRLTSIQSILNRKATMERK 1825          
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: A0A7S1E7E3_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E7E3_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.370e-15
Identity = 46/129 (35.66%), Postives = 75/129 (58.14%), Query Frame = 3
Query: 3006 LTTIIRACITLELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVHKPTKDACNEIKNSQRLDSI 3392
            LT I  A ITLE+STR S+ CC       AP +LY+L+   NRS PH +I++  + T RN+ +    +  +  A P +    LDL+QM+R++ +VFV    +  +L+  +K  K+ C++ +N +RL  +
Sbjct:    2 LTEITDAAITLEMSTRLSRNCCVAFVNVGAPSILYELLGTCNRSLPHVEIVRIVLLTLRNVSKHKDLLNDV--ATPGSGGVILDLVQMFRDKDDVFVVALIIFSRLLRYNKKLKETCSQPENMKRLTHV 128          
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: A0A2V0PC77_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PC77_9CHLO)

HSP 1 Score: 84.0 bits (206), Expect = 2.200e-12
Identity = 51/144 (35.42%), Postives = 72/144 (50.00%), Query Frame = 3
Query: 2898 ARARLAEAEDRRRADPSLALGVRIESALKSLEHGTHLTTIIRACITLELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVA 3329
            ARARL  A       P   +GVR   ALK L      T +I A   +E STRYS+ CC +IAES     L   +R  NRS PH ++L+  +    N+ +     P ++ AP        + LQM+R+ ++VF+    LL +L A
Sbjct: 2056 ARARLEAAAAAAECAPHKRIGVRAREALKVLLASKQCTQVITAVSAIEFSTRYSRDCCALIAESGGVPALLSFMRSCNRSKPHAEMLRLALGVLHNVARWRELAPAVLGAPECVA-VLSERLQMFRDMEDVFLSVVGLLSKLAA 2198          
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: A0A1Z5KIP8_FISSO (Calponin-homology (CH) domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KIP8_FISSO)

HSP 1 Score: 82.8 bits (203), Expect = 4.660e-12
Identity = 49/169 (28.99%), Postives = 89/169 (52.66%), Query Frame = 3
Query: 2907 RLAEAEDRRRADPSLALGVRIESALKSLEHGTHLTTIIRACITLELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVHKPTKDACNEIKNSQRLDSISDILARK 3413
            R+  A++    +P L L  + + AL  L   + L+ I+ +   LE +TRYS  CC     + AP +L+ LVR  NRS PH ++L++ + T  N+ +    +  +  A       +LDLLQM+R+++ VF  +  LL + +  +      C   +N +RL ++ D+++ +
Sbjct: 1578 RIEAAQNNSTMNPDLRLCNKTKRALNRLRKSSGLSDILDSIKFLERATRYSHHCCTAFTRAGAPDILFSLVRSCNRSLPHVELLEWILLTLSNVARFDEHLNSV--ATLTGVRIYLDLLQMFRDKEIVFSLSVALLLKSLKENVDLMGYCKSKENKKRLQAVYDVVSSR 1744          
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Match: A0A0D2MQ02_9CHLO (Putative Abnormal spindle-like microcephaly-associated protein like protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MQ02_9CHLO)

HSP 1 Score: 81.3 bits (199), Expect = 1.300e-11
Identity = 54/180 (30.00%), Postives = 84/180 (46.67%), Query Frame = 3
Query: 2898 ARARLAEAEDRRRADPSLALGVRIESALKSLEHGTHLTTIIRACITLELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRNLVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVHKPTKDACNEIKNS--QRLDSISDILARKAAAECK 3431
            AR RL  A       P   +G R   ALK L        +I A   +E STRYSK CC +IAES     L   +RG NRS PH ++L+  +    N  +     P ++AAP        + +QM+R+ +++F+    LL +L +          +   +  ++ + ++ I+ARK   E K
Sbjct: 1102 ARRRLEAAAAAAEGAPHRRIGARAREALKVLLASKSCAQVITAVAAMEFSTRYSKECCTLIAESGGVAALLQFMRGCNRSKPHAEMLRLALAVLHNCARWRELAPPVLAAPECVA-VLSERMQMFRDMEDIFLLVVGLLARLASTDAGALAVAADAGPAFLRQWEGVAAIIARKLDMERK 1280          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig272.7439.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KRH5_9PHAE2.050e-7357.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LLN9_ECTSI2.580e-6761.33Similar to asp (Abnormal spindle)-like, microcepha... [more]
A0A835Z978_9STRA4.730e-3248.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3YG01_HETAK6.310e-2033.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2EB46_9STRA8.400e-1733.33Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]
A0A0L0DQD4_THETB8.250e-1636.31Uncharacterized protein n=1 Tax=Thecamonas trahens... [more]
A0A7S1E7E3_9STRA1.370e-1535.66Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]
A0A2V0PC77_9CHLO2.200e-1235.42Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A1Z5KIP8_FISSO4.660e-1228.99Calponin-homology (CH) domain-containing protein n... [more]
A0A0D2MQ02_9CHLO1.300e-1130.00Putative Abnormal spindle-like microcephaly-associ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig272contigH-paniculata_contig272:5543..14086 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score263.5
Seed ortholog evalue4.9e-67
Seed eggNOG ortholog2880.D8LLN9
Preferred nameASPM
KEGG koko:K16743,ko:K16774
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000212,GO:0000226,GO:0000280,GO:0000922,GO:0001764,GO:0002052,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005856,GO:0005874,GO:0005886,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007292,GO:0007399,GO:0007405,GO:0007417,GO:0007420,GO:0007548,GO:0008150,GO:0008283,GO:0008284,GO:0008406,GO:0008584,GO:0009786,GO:0009966,GO:0009967,GO:0009987,GO:0010646,GO:0010647,GO:0010720,GO:0010721,GO:0015630,GO:0016020,GO:0016043,GO:0016324,GO:0016477,GO:0017145,GO:0019827,GO:0019899,GO:0019900,GO:0019901,GO:0019953,GO:0021537,GO:0021543,GO:0021872,GO:0021873,GO:0021987,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023056,GO:0030111,GO:0030154,GO:0030177,GO:0030496,GO:0030900,GO:0032501,GO:0032502,GO:0032504,GO:0036445,GO:0036449,GO:0040007,GO:0040011,GO:0042127,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044446,GO:0044459,GO:0044464,GO:0044703,GO:0045137,GO:0045177,GO:0045595,GO:0045596,GO:0045597,GO:0045664,GO:0045665,GO:0045769,GO:0046546,GO:0046661,GO:0048103,GO:0048232,GO:0048285,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048589,GO:0048608,GO:0048609,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050767,GO:0050768,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0051094,GO:0051179,GO:0051225,GO:0051235,GO:0051239,GO:0051240,GO:0051241,GO:0051301,GO:0051302,GO:0051321,GO:0051445,GO:0051640,GO:0051641,GO:0051642,GO:0051651,GO:0051653,GO:0051657,GO:0051661,GO:0051674,GO:0051704,GO:0051726,GO:0051782,GO:0051960,GO:0051961,GO:0051962,GO:0055057,GO:0060284,GO:0060322,GO:0060828,GO:0061351,GO:0061458,GO:0061842,GO:0065007,GO:0065008,GO:0070925,GO:0071840,GO:0071944,GO:0072089,GO:0072091,GO:0072686,GO:0072687,GO:0090263,GO:0090306,GO:0097150,GO:0097431,GO:0098590,GO:0098727,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140013,GO:1902692,GO:1903046,GO:1990752,GO:2000026,GO:2000177,GO:2000179,GO:2000241,GO:2000648
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0160@2759,KOG0165@1,KOG0165@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons9
Model size3941
Cds size3534
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929818.4602747-UTR-H-paniculata_contig272:5542..56141622929818.4602747-UTR-H-paniculata_contig272:5542..5614Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig272 5543..5614 -
1691481025.1446884-UTR-H-paniculata_contig272:5542..56141691481025.1446884-UTR-H-paniculata_contig272:5542..5614Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig272 5543..5614 -
1622929818.6170912-UTR-H-paniculata_contig272:13751..140861622929818.6170912-UTR-H-paniculata_contig272:13751..14086Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig272 13752..14086 -
1691481025.252447-UTR-H-paniculata_contig272:13751..140861691481025.252447-UTR-H-paniculata_contig272:13751..14086Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig272 13752..14086 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929818.473546-CDS-H-paniculata_contig272:5614..61361622929818.473546-CDS-H-paniculata_contig272:5614..6136Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 5615..6136 -
1691481025.1577513-CDS-H-paniculata_contig272:5614..61361691481025.1577513-CDS-H-paniculata_contig272:5614..6136Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 5615..6136 -
1622929818.4868696-CDS-H-paniculata_contig272:7168..72491622929818.4868696-CDS-H-paniculata_contig272:7168..7249Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 7169..7249 -
1691481025.1690853-CDS-H-paniculata_contig272:7168..72491691481025.1690853-CDS-H-paniculata_contig272:7168..7249Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 7169..7249 -
1622929818.502691-CDS-H-paniculata_contig272:7617..77231622929818.502691-CDS-H-paniculata_contig272:7617..7723Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 7618..7723 -
1691481025.177828-CDS-H-paniculata_contig272:7617..77231691481025.177828-CDS-H-paniculata_contig272:7617..7723Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 7618..7723 -
1622929818.5217216-CDS-H-paniculata_contig272:8399..85201622929818.5217216-CDS-H-paniculata_contig272:8399..8520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 8400..8520 -
1691481025.1890135-CDS-H-paniculata_contig272:8399..85201691481025.1890135-CDS-H-paniculata_contig272:8399..8520Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 8400..8520 -
1622929818.5388682-CDS-H-paniculata_contig272:9064..91381622929818.5388682-CDS-H-paniculata_contig272:9064..9138Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 9065..9138 -
1691481025.2047698-CDS-H-paniculata_contig272:9064..91381691481025.2047698-CDS-H-paniculata_contig272:9064..9138Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 9065..9138 -
1622929818.5533662-CDS-H-paniculata_contig272:9633..97551622929818.5533662-CDS-H-paniculata_contig272:9633..9755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 9634..9755 -
1691481025.2159426-CDS-H-paniculata_contig272:9633..97551691481025.2159426-CDS-H-paniculata_contig272:9633..9755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 9634..9755 -
1622929818.5696425-CDS-H-paniculata_contig272:10770..110291622929818.5696425-CDS-H-paniculata_contig272:10770..11029Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 10771..11029 -
1691481025.2238283-CDS-H-paniculata_contig272:10770..110291691481025.2238283-CDS-H-paniculata_contig272:10770..11029Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 10771..11029 -
1622929818.5850294-CDS-H-paniculata_contig272:11432..136381622929818.5850294-CDS-H-paniculata_contig272:11432..13638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 11433..13638 -
1691481025.2343388-CDS-H-paniculata_contig272:11432..136381691481025.2343388-CDS-H-paniculata_contig272:11432..13638Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 11433..13638 -
1622929818.5996907-CDS-H-paniculata_contig272:13708..137511622929818.5996907-CDS-H-paniculata_contig272:13708..13751Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 13709..13751 -
1691481025.2441173-CDS-H-paniculata_contig272:13708..137511691481025.2441173-CDS-H-paniculata_contig272:13708..13751Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig272 13709..13751 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig272.7439.1prot_H-paniculata_contig272.7439.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig272 5615..13751 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig272.7439.1

>prot_H-paniculata_contig272.7439.1 ID=prot_H-paniculata_contig272.7439.1|Name=mRNA_H-paniculata_contig272.7439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1178bp
MVAWGSHEGATSGGPRHYRRLLSATSALQAWSRGVLTRERLAVAAAQSRL
EYATAVRLQAWARGAAQARHYRRLLSATSALQAWSRGVLTRERLAVAAAQ
CRLEYATAVRLQAWARGVEGERRYRRQLTVIVAMQALRRGVATRLRLAEK
RETERVAAEWCTAAVRVQACVRARQESASFRRKRDAAVALQTWRRGIAVR
ASLAKSKAAATRLQAWTRAAFACQRYRQAISASVVIQTRWRGAMASSLYR
IQRASTVTIQARWRGAVGLALYHKQRAAAVVVQSTWRAHRARRAFFCQVE
QVTRLQGWWRTIAAREHLRELRQLALNRKRYRSAVCLQALWRAAMVRALR
RKALFGVVQLQAVARGVSTRARLEQEWVEQERMEREQQRAAITLQAFARA
VATKRALRKAHAGAVVLQMWQRGRLARQAVAVVKAAKEEQERQTAAAAAA
AAAVVIQAMARGLAARRVLEAETAAAVTLQNFVRATEARVELSRMRAERA
HTVELSRRRSAAAVRIQCATRAAAAGAMVRKMKEVKARRIEEETKAAVMI
QAAWRGSTGRVRAKKTLARKIIAAMAAEQAAEKARVAATTLQACARGRRA
RQVLRRSVWVVVAVQTRWRALAAGREVAGRRAAAAAQHTALQWSAAVRLQ
AFVRGVVSVARYRRSLSATRVLQARWRGVSTRIRMAAEAAKIQTEREERA
AVRLQAMARGRWSAQRAAFVRVVAQRENAATTVQTSWRQVAVRAKWSRAR
NGMVALQALCRGRAARQTMAREMPASTLLGAWWRAKRGANRFLVARRGVV
ALQSVVRGRLVRRESAAVLQELHRRLSQHAAATRIQAAVRGRRMRRAAGA
KVANARARLAEAEDRRRADPSLALGVRIESALKSLEHGTHLTTIIRACIT
LELSTRYSKVCCQVIAESRAPRVLYDLVRGLNRSPPHQKILKYTITTFRN
LVQRGGTMPGLVAAPPLATETFLDLLQMYRERQEVFVPTARLLQQLVAVH
KPTKDACNEIKNSQRLDSISDILARKAAAECKSSGGRGSPVKVQGGGRSS
PQKSEGSGARVSPAKSQTNGSRPSPAKSQAGGGSVKGVGSPVKCQRNGGG
LKGVGSPVKCQSNGGSLKGVGSPAKSQAGGGGGSLRGVGSPVKRSGGGYM
GGGNGGNGKNSRSLKAIHLLMQELARE*
back to top

mRNA from alignment at H-paniculata_contig272:5543..14086-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig272.7439.1 ID=mRNA_H-paniculata_contig272.7439.1|Name=mRNA_H-paniculata_contig272.7439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8544bp|location=Sequence derived from alignment at H-paniculata_contig272:5543..14086- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACAAGTGCTCTACAAGCATGGTCGCGCGGAGTTCTCACTAGGGAGAGACT AGCGGTGGCCGCCGCTCAGCGTCGGCTCGAGTACGCGACCGCGGTCCGTC TACAGGCATGGGCTAGGGGCGCAGCGGAAGCTCGCCATTACCGCCGCCTA TTATCCGCAACAAATGCTCTACAAGCATGGTCGCGTGGGGTTCTCACGAG GGAGCGACTAGCGGTGGCCGCCGCTCAGCGTCGGCTCGAGTACGCGACCG CGGTCCGTCTACAGGCATGGGCTAGGGGCGCAGCGCAAGCTCGCCATTAC CGCCGCCTATTATCCGCAACTAATGCTCTGCAAGCATGGTCGCGTGGGGT TCTCACGAGGGAGCAACTAGCGGTGGCCGCCGCCCAGCGTCGGCTCGAGT ACGCGACCGCGGTTCGTCTACAGGCATGGGCTAGGGGCACAGCGGAAGCT CGCCATTACCGCCGCCTATTATCCGCTACAAGTGCTCTGCAAGCATGGTC GCGTGGGGTTCTCACGAGGGAGCGACTAGCGGTGGCCGCCGCCCAGAGTC GGCTCGAGTACGCGACCGCGGTCCGTCTACAGGCATGGGCCAGGGGCGCA GCGCAAGCTCGCCATTACCGCCGCCTATTATCTGCAACAAGTGCTCTGCA AGCATGGTCGCGCGGAGTTCTCACGAGGGAGAGACTAGCGGTGGCTGCCG CCCAGTGTCGGCTCGAGTACGCGACCGCGGTCCGTCTACAGGCATGGGCG CGAGGTGTGGAGGGAGAGCGCCGCTACCGCCGTCAGCTTACCGTAATCGT GGCAATGCAGGCCCTGCGCCGTGGTGTTGCGACACGACTCCGGCTGGCCG AAAAACGAGAGACCGAGCGGGTCGCCGCTGAGTGGTGCACTGCCGCGGTC CGCGTGCAGGCATGCGTACGGGCGAGACAGGAGAGTGCGAGCTTCCGGCG GAAGCGCGATGCTGCAGTTGCTTTGCAAACTTGGCGACGCGGGATAGCGG TTAGAGCAAGCCTGGCCAAAAGCAAGGCGGCGGCGACACGGCTACAGGCG TGGACTCGGGCTGCTTTCGCGTGCCAGCGCTACCGCCAGGCCATCTCGGC TTCCGTTGTCATCCAAACGCGATGGCGTGGCGCTATGGCATCTTCGTTAT ACCGTATCCAACGTGCTTCTACCGTGACGATCCAGGCTCGTTGGCGCGGT GCGGTGGGCCTTGCTCTGTACCACAAGCAGCGCGCAGCCGCGGTCGTTGT CCAGAGCACTTGGCGTGCTCACCGAGCGCGGCGCGCGTTTTTCTGTCAGG TAGAACAGGTGACGCGGCTACAGGGCTGGTGGCGTACGATCGCCGCTCGA GAGCATTTGCGAGAACTCCGCCAGCTTGCACTCAATCGAAAACGGTATCG ATCTGCAGTATGCCTGCAGGCGCTGTGGCGTGCGGCAATGGTTCGAGCTC TCCGCCGGAAAGCCCTCTTCGGGGTGGTTCAGCTACAGGCCGTGGCAAGG GGAGTATCCACGAGAGCCCGCCTTGAGCAAGAATGGGTGGAGCAGGAACG CATGGAGCGTGAGCAGCAACGGGCGGCCATCACCTTGCAGGCATTTGCGC GCGCCGTGGCCACGAAGCGAGCTCTTCGGAAAGCCCATGCGGGCGCGGTT GTCCTGCAGATGTGGCAGCGCGGCCGACTCGCGCGACAAGCTGTGGCGGT GGTAAAGGCCGCGAAGGAGGAACAAGAGCGCCAGACAGCAGCAGCGGCGG CGGCGGCGGCGGCTGTCGTAATACAGGCGATGGCGCGGGGTCTTGCCGCT CGTCGTGTACTGGAAGCTGAGACCGCGGCCGCGGTCACGTTGCAGAACTT CGTCAGGGCAACGGAGGCAAGGGTGGAGCTTTCTCGTATGCGCGCCGAGA GAGCTCATACGGTTGAGCTGTCTCGGCGACGATCGGCCGCCGCGGTTAGG ATTCAGTGCGCTACAAGGGCCGCCGCGGCTGGAGCCATGGTCCGAAAAAT GAAGGAGGTCAAGGCGAGGCGTATCGAGGAAGAAACGAAAGCCGCAGTGA TGATCCAGGCTGCGTGGCGAGGTTCCACGGGACGGGTTCGGGCGAAGAAG ACCCTGGCCCGCAAGATCATCGCTGCGATGGCAGCGGAGCAAGCCGCGGA GAAAGCTAGAGTGGCGGCCACGACCCTTCAGGCTTGCGCTCGAGGACGCC GAGCTAGGCAAGTCTTGCGCCGGTCTGTGTGGGTCGTCGTTGCTGTCCAG ACGCGCTGGCGTGCGCTCGCCGCGGGACGGGAGGTCGCCGGTAGGAGGGC CGCCGCTGCAGCCCAGCACACTGCTTTGCAATGGTCGGCGGCTGTACGGC TGCAGGCGTTTGTGCGTGGGGTAGTGTCAGTCGCGCGGTACCGTAGGTCT CTCTCGGCCACGAGGGTGCTGCAGGCCCGTTGGCGTGGAGTGTCGACGAG GATTCGTATGGCCGCCGAAGCCGCGAAGATACAGACGGAGCGTGAAGAGC GAGCGGCCGTGAGGCTGCAAGCGATGGCTCGCGGGCGGTGGTCGGCCCAG CGCGCAGCATTCGTACGTGTGGTTGCACAGAGGGAGAACGCTGCTACCAC TGTGCAAACTTCGTGGAGGCAGGTTGCTGTGCGCGCGAAATGGTCAAGGG CAAGGTGGGTTGCTTGCCTATCTGTCTCGTCACATTTTACTTTGTCTTAC ATGTAGTGAGCTGGCTGCGTTTGCAGCAAAGCGTCTAGAGATGTGGCATG CACGCGTGATCATCCGCGGACAGGTCACAAATCACAACAGTGCTACGTGG ATAGCGATGGATATTTTTTCAAAGCCGGACGAATGGTGCGTCACCGGGAA GATGATACAGACCACCAAGTCGGATGAGAAATTGGGACAAATGTTCCCCA ATGACGGCGAATATTGACCGTCCTACCTTCCCTCGCCTATACCCCATCAT CCCCCCCTCTATCCTCATCTTAGTGTAGCCTAAATGATAACGGATCTTTT TCCCCTCTCCCACCTCTGTCGTTAAACTAATTTGGCATGCGCCCGAATAC CTGGTAGAAACGGAATGGTCGCCCTGCAAGCCTTATGCAGGGGGCGTGCC GCGCGCCAGACTATGGCTCGAGAAATGCCTGCCTCAACATTGCTGGGTGC CTGGTGGCGAGCGAAGCGAGGGGCTAACCGCTTCCTCGTGGCCAGGCGAG GGGTCGTGGCGCTGCAGAGCGTGGTGCGCGGGAGGCTCGTCCGGCGGGAG AGTGCGGCGGTATTGCAAGAGCTCCATCGGCGGCTCTCGCAGCATGCGGC AGCTACTAGAATCCAGGTTCGTACGTTTTATGTTTCTTATCGGGTGGGGT TAGTGGCGGTGGATGTGAGAAACCAGAAGGTGCGGGTACGGTATCGAGGC TCACGGAGTTTAATGGAGGCACAAAATTGTGCGACTGGAAATTCTGCTGT ATCTATCCGTAGGTATTCGTACGTCTGTTTTTTGGCACTCACTGAGTTGT ATCAAACAGCGTTTCGTAATCAAACAAGTGCGATTTGGGGTCATTGTATC TGTACCGCGTTTATTGCCAAGAAATTTTGCACGACCAATCGCAATCCGGT GCGCTGCTGTGCGAAAAAAAAACAACCAGCGAACCCGTCCCTGTCAAGCT GTTGCGAAGAGTTTTCGGTCTCTGCTGTTGTTCTACAGCAGTACCTGTTC GCCTATTCAACCTTCTGGTGACGCATCATCAAATCTCGGTTATAGACGCT GCTTTTGCTATTTTTGCAGGCAACCAATGAACTTCCATGAGTATCCGATT TCCGCTGTTCTACAATACCGTGCATATAACCAAATCCGCACTCAAGGAAT TTTCGAGTATATCGTATCGCCTTTTTTCCAGGCAACGACGGGGACCACGA ACATATACTCTACTATCCGTTCTTGTCACCCTTCAACATATGAATAATAG ACACTTGTAGTAGAGAGCCACGGGTGATATTCAGAACGGACATTTTGACT CACGCGTTACCGCCATCATAACGTTAGCGTGTTACGTAATCGTTGACATA TATATATATATATATATACTGGAAGTATAATATGTATTTGATCAGAACAT GGAGTATTGATTCAACAACGAACCGGTAAGGCCTCCAACAAGGTGTATGT CTATGCCTTACAATACAAGAGGATTCAGCCGGAACAGGCCAAAACGTGCG CTGAGTGTCAAAATATTTGGATAACGGCCTCAGATCTAAAAAATAATATT GCCTAGTTAGCTTGTAACCCTGCACGAGCCAGATTTAAACTGTTGACGCG ACTTTTACGTTTTGTTATATATATATTACAGGCCGCTGTGCGTGGACGGA GGATGCGACGGGCTGCCGGCGCGAAGGTTGCAAACGCTCGAGCGAGGCTG GCCGAGGCTGAAGATCGACGGCGTGCGGATCCCTCTCTTGCCCTCGGGGT TCGGTGCGTGTCGTTTCGCTTTTTCTCGAGGGGGGGGGGTGTGCTTGTAA ATCTACGATACACGTAGTCTACTCTGCTTTCATACTCCTCCTTACTGAAG TACGTTTTTCGTAGACGTCTTCGGGCGTTTGCCTGAGTCCTGATGGAGCC GAGCCTTGATGTTACTACTCGACGGTGTGTCAGTCATTAGTCTTGAACAT CACAGTGAAGGCGTGAAGAATATGAACATGACCCCCTTCTTGTGGTTGTT TTTATTGTTGTTCGAATATTGGAAAGTTTTATTCCTTTTCTTGTGCGATA TTTGGCGACGTACGAAACATCGAGTAGCCATCGGAAATCCCCCGGAGGGT AAAGAAGCTTCGCCCTCTCAAGGGCGTGTGGTAGATGATCTGGAATTTCC CCCCCCTTCCCCGTCCGGCCCCCGCCCGCGTGCCCCCCATCTATTGTTGC AATTATTCTCCGGGATCAACCAATGCTGAATCCGTGTATGCGGAACAGGA TTGAGTCTGCTCTTAAGTCATTGGAGCATGGTACACATCTCACAACGATC ATACGTGCTTGCATCACGCTAGGTGAGGGAGGCTCTTGAAGAGTAGATGC GCTTCAGTACCCCCGAGTCCAAAGTTAGATTTGCGTCGGAGCTGGGCGGG TGGGGGTCTCTGCTGCCCTACAACTACTGCTTGCTACCTGCATGTGTTTC TTTCTTCTTTTGTACCTGCCGCCTTTTGTATGCTGTGTGCAGTTTGCGTG AAATGTGATTTTGACTGACCGGCGGGTCTGAGCGATTGGACGAATGTGTC GTGGAAAAGGAATGTGTAATCTGAAAAAATTCCACTCTATGATTTTCAAT TAGTGGTGATTGCTCTGTAGTAATGTATAAAGTCATAATTAAACCTCGCA TCTGGCAAGTCTTGAAGACAGATGGAACCAACCGGCTCTGGGAGCGAATG GTCTTCATGCAAGAACGACCACTGACTGCAACCGACGGAACAACCGGAAC GCCCTCACTCGCTCTCTCTCTCTTTTTCTATCGACGTTTATGCGTTTATT GAATGAAGGGTATTGGTGGCGTTCGTTGTTTGCTATCTCTTTACACTTGT TTGTTCGCTATTGTAGAGCTGTCGACAAGGTACTCTAAGGTGTGCTGCCA GGTGATAGCCGAGTCGAGGGCGCCGCGCGTCCTGTACGATTTAGTGCGAG GCCTAAACCGGAGTCCTCCGCATCAAAAGATTCTCAAGTGAGTTTAGTTG ATTGGTGACGATTGATGATGGTGATGGTGGTGATGGTGAGCCTCTTGTAG TTAAGGTCGGGTAATGGGAGTTCTACTGTTAGGTGCGTTTCACGGGACGC ACGTCAGGGACTGACGTTTCCACCTTTTTCCCATTGGATCATGACGAAAT GAACGATATACAAAATACGGTTGAAAAGAAGAGTGGTACTACCATAAAAA TGTCTTCATGGAAGTGCGGGTCGTCTCTTCTTTTTAATGCGCCATCAACG CTTTTGGCATGTTTTTTTTTTTCGCGAAGGAAAACATTCACCCCCCCGGA CAAATAAATACGAATATACTTACAAATGGTTTTCACAAAAAACTGGAAGT ATTCGCCTGAGTTTCAAAATAAGCTCGTGTATTTTGTGTGCCCCGCACCG TTCACGACTGCTAGTAATATTCGTAAACCGAATGGACAGGGATGAGTACT TACTTTAGCCTACGCGTCCGCTTATTCTGAAACTCGGGCGAATACTTAAT TCTTTTTTTTTTGTGAAACCTATTTGCAAGTATGCGTATTTGTCCGGGAG ATAAAAACATTGCAAATGTCTACAAATTTCACCCTATCCAACTAGTATTG CTCTTGTTTTGTAAACCCCCTTCCATCCCTTCCCGCCTGCCCGTCCCTTT TTCCTCTCCTCAGATACACGATCACTACCTTCCGGAACCTGGTCCAGCGT GGAGGAACAATGCCAGGTCTCGTGGCCGCGCCCCCACTCGCCACGGAAAC GTTCCTCGACCTGCTCCAGGTGAAGGCAGAGACGAGGCTAAACAATGCAA CAAAATAAAAAAATAAAAAATAAGCAACTCTCTCTCTCTCTCTCTCTGCT CCAAAACAAAATAATATTTATTTAATCAATCTGTTTTTGAAGTATGGAAG ATTCATTGTCTCTCTTGTGAAAGGTCATCCTGTGAAGATGGATGGATGGA TGGATGGATGGATAAATGGATGGGTAGATAGTTGAGTGGGTAGGTGGATT GTACTGATATTTTTTTGTGCGTTTGTCGCACTCTTTTTTTTGTTGTTGTT TTTTTCGATGATCGCTTTTTTGTTTAAATCGTATTTCTGCTTTTTCCCCC TTTCGTTTTTCTGTTGTATTTCGTTTTTTTGGGACAGATGTATCGCGAGC GGCAAGAAGTATTTGTCCCCACCGCGCGCCTGCTACAGCAACTCGTGGCC GTGCACAAACCCACCAAGGTGAAGCAAGGAACACACACACACACACAAGA GAGAACAGAGAGAAAAACAGATGAAAATGTTGTCTACGATACGATCACCA TGCACAGGACAAGCACATGACAACAAAAAGGAAAGAAAAGGTTGCAAGTG TGATTGTATGCCGTGAAGGTCGGAGAGAACGCCTCTGCCGAGTGGGCATC AGATGAAATGGGAATTACCTAATACAAACACCCCAGATACAATCAATTCA ACAACATGAATAGTAAACACCCCGGTGACTTTGAGAATGTTTTGGGTTGA TTTAACCGTTTTAGTGTCCATGGGGATATGAAGGGATCAGTTTTCGATAG TTGGAACACAGCAAGTCGTGCTATGTGTGGCAGAGACGATGGTTTTAATT GGTTGTCCAGAGGATACAAGTGCGTGAAATTGGCTTGAACTCATACCACG GGTGTGGTCTTCATCTAGCGCTCCGAGATCAAGCACCTAACACCTTCCCC CTTGCGGGTTCCCCCGGAGGTGTGTCTGGTGCGTTTTCTATTCCGCTCAA AAGATTCGTTTTTCTCTCGAGAATAAATAAACATGAACGACTGGTGCATG CCGTGGTGCGAGCATGTGCCGATTTTGTTGTTTGCATGCATGTATCAAGC CAGCATTTTGCTCATAAGCACTGTCGGTACAATTGTTTACTGTACAAAAA ACGTCCCTATTTTGTTTCGAGCGTCTTGTGGACAGCTCAGCGTACCGAGT GTCAAGGGGATCGTTTTGGCGATCGCCCCGAGGCGAGAATGCCCCTCTCC TCCTTCCCACAATATGACATAACGCGCAGATGTTGTAACGGGCTTCCTCT TGAAATCGGTTTAAAATATACTACACCGTATAGAGGTGCAAAATAAATGG TCCGTTTCCAAGTTGAGAAATTTCACCTACATGAGCCTCGCTGCGCTTGC CATGGCTCTTCCAGTTATGATATCTTCCGATGATACTTGGTCAAGGTCAA AACTGAAGCTGTCTTGAAATTGGTGATCAATTTTCGAAACACAACAACAG GACGCATGCAACGAAATCAAGAATTCGCAGCGACTGGACAGCATCTCAGA TATCCTCGCGCGGAAGGCGGCCGCCGAGTGTAAGAGTAGCGGCGGTCGAG GCTCCCCGGTGAAGGTCCAAGGTGGCGGACGAAGTTCCCCCCAGAAGAGC GAGGGCAGTGGTGCTCGAGTTTCCCCAGCGAAGAGCCAAACAAACGGTAG TCGACCTTCCCCGGCGAAAAGCCAAGCTGGCGGCGGCAGCGTGAAGGGTG TCGGTTCGCCGGTGAAATGCCAGAGGAACGGGGGCGGCCTAAAGGGTGTC GGTTCGCCGGTGAAATGCCAGAGTAACGGCGGCAGCCTGAAGGGTGTCGG TTCACCGGCGAAGAGTCAGGCTGGCGGCGGCGGCGGAAGCCTGAGGGGTG TCGGTTCGCCTGTGAAAAGGAGTGGTGGCGGTTACATGGGCGGGGGGAAT GGTGGCAACGGCAAGAATTCTAGGTCTTTGAAGGCTATCCATCTGCTGAT GCAAGAACTAGCGCGGGAGTGATTTTTTTTGTACGAAATCGATGGATTTA TGGATTTATGGATTGATAGATAAGTGGTGAGTGGCTTTTGGTGG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig272:5543..14086-

>mRNA_H-paniculata_contig272.7439.1 ID=mRNA_H-paniculata_contig272.7439.1|Name=mRNA_H-paniculata_contig272.7439.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=7068bp|location=Sequence derived from alignment at H-paniculata_contig272:5543..14086- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGTCGCGTGGGGTTCTCACGAGGGAGCAACTAGCGGTGGCCATGGTCG
CGTGGGGTTCTCACGAGGGAGCAACTAGCGGTGGCCCTCGCCATTACCGC
CGCCTATTATCCGCTACAAGTGCTCTGCAAGCATGGTCGCGTGGGGTTCT
CACGAGGGAGCGACTAGCGGTGGCCGCCGCCCAGAGTCGGCTCGAGTACG
CGACCGCGGTCCGTCTACAGGCATGGGCCAGGGGCGCAGCGCAAGCTCGC
CATTACCGCCGCCTATTATCTGCAACAAGTGCTCTGCAAGCATGGTCGCG
CGGAGTTCTCACGAGGGAGAGACTAGCGGTGGCTGCCGCCCAGTGTCGGC
TCGAGTACGCGACCGCGGTCCGTCTACAGGCATGGGCGCGAGGTGTGGAG
GGAGAGCGCCGCTACCGCCGTCAGCTTACCGTAATCGTGGCAATGCAGGC
CCTGCGCCGTGGTGTTGCGACACGACTCCGGCTGGCCGAAAAACGAGAGA
CCGAGCGGGTCGCCGCTGAGTGGTGCACTGCCGCGGTCCGCGTGCAGGCA
TGCGTACGGGCGAGACAGGAGAGTGCGAGCTTCCGGCGGAAGCGCGATGC
TGCAGTTGCTTTGCAAACTTGGCGACGCGGGATAGCGGTTAGAGCAAGCC
TGGCCAAAAGCAAGGCGGCGGCGACACGGCTACAGGCGTGGACTCGGGCT
GCTTTCGCGTGCCAGCGCTACCGCCAGGCCATCTCGGCTTCCGTTGTCAT
CCAAACGCGATGGCGTGGCGCTATGGCATCTTCGTTATACCGTATCCAAC
GTGCTTCTACCGTGACGATCCAGGCTCGTTGGCGCGGTGCGGTGGGCCTT
GCTCTGTACCACAAGCAGCGCGCAGCCGCGGTCGTTGTCCAGAGCACTTG
GCGTGCTCACCGAGCGCGGCGCGCGTTTTTCTGTCAGGTAGAACAGGTGA
CGCGGCTACAGGGCTGGTGGCGTACGATCGCCGCTCGAGAGCATTTGCGA
GAACTCCGCCAGCTTGCACTCAATCGAAAACGGTATCGATCTGCAGTATG
CCTGCAGGCGCTGTGGCGTGCGGCAATGGTTCGAGCTCTCCGCCGGAAAG
CCCTCTTCGGGGTGGTTCAGCTACAGGCCGTGGCAAGGGGAGTATCCACG
AGAGCCCGCCTTGAGCAAGAATGGGTGGAGCAGGAACGCATGGAGCGTGA
GCAGCAACGGGCGGCCATCACCTTGCAGGCATTTGCGCGCGCCGTGGCCA
CGAAGCGAGCTCTTCGGAAAGCCCATGCGGGCGCGGTTGTCCTGCAGATG
TGGCAGCGCGGCCGACTCGCGCGACAAGCTGTGGCGGTGGTAAAGGCCGC
GAAGGAGGAACAAGAGCGCCAGACAGCAGCAGCGGCGGCGGCGGCGGCGG
CTGTCGTAATACAGGCGATGGCGCGGGGTCTTGCCGCTCGTCGTGTACTG
GAAGCTGAGACCGCGGCCGCGGTCACGTTGCAGAACTTCGTCAGGGCAAC
GGAGGCAAGGGTGGAGCTTTCTCGTATGCGCGCCGAGAGAGCTCATACGG
TTGAGCTGTCTCGGCGACGATCGGCCGCCGCGGTTAGGATTCAGTGCGCT
ACAAGGGCCGCCGCGGCTGGAGCCATGGTCCGAAAAATGAAGGAGGTCAA
GGCGAGGCGTATCGAGGAAGAAACGAAAGCCGCAGTGATGATCCAGGCTG
CGTGGCGAGGTTCCACGGGACGGGTTCGGGCGAAGAAGACCCTGGCCCGC
AAGATCATCGCTGCGATGGCAGCGGAGCAAGCCGCGGAGAAAGCTAGAGT
GGCGGCCACGACCCTTCAGGCTTGCGCTCGAGGACGCCGAGCTAGGCAAG
TCTTGCGCCGGTCTGTGTGGGTCGTCGTTGCTGTCCAGACGCGCTGGCGT
GCGCTCGCCGCGGGACGGGAGGTCGCCGGTAGGAGGGCCGCCGCTGCAGC
CCAGCACACTGCTTTGCAATGGTCGGCGGCTGTACGGCTGCAGGCGTTTG
TGCGTGGGGTAGTGTCAGTCGCGCGGTACCGTAGGTCTCTCTCGGCCACG
AGGGTGCTGCAGGCCCGTTGGCGTGGAGTGTCGACGAGGATTCGTATGGC
CGCCGAAGCCGCGAAGATACAGACGGAGCGTGAAGAGCGAGCGGCCGTGA
GGCTGCAAGCGATGGCTCGCGGGCGGTGGTCGGCCCAGCGCGCAGCATTC
GTACGTGTGGTTGCACAGAGGGAGAACGCTGCTACCACTGTGCAAACTTC
GTGGAGGCAGGTTGCTGTGCGCGCGAAATGGTCAAGGGCAAGCTCGCCAT
TACCGCCGCCTATTATCCGCTACAAGTGCTCTGCAAGCATGGTCGCGTGG
GGTTCTCACGAGGGAGCGACTAGCGGTGGCCGCCGCCCAGAGTCGGCTCG
AGTACGCGACCGCGGTCCGTCTACAGGCATGGGCCAGGGGCGCAGCGCAA
GCTCGCCATTACCGCCGCCTATTATCTGCAACAAGTGCTCTGCAAGCATG
GTCGCGCGGAGTTCTCACGAGGGAGAGACTAGCGGTGGCTGCCGCCCAGT
GTCGGCTCGAGTACGCGACCGCGGTCCGTCTACAGGCATGGGCGCGAGGT
GTGGAGGGAGAGCGCCGCTACCGCCGTCAGCTTACCGTAATCGTGGCAAT
GCAGGCCCTGCGCCGTGGTGTTGCGACACGACTCCGGCTGGCCGAAAAAC
GAGAGACCGAGCGGGTCGCCGCTGAGTGGTGCACTGCCGCGGTCCGCGTG
CAGGCATGCGTACGGGCGAGACAGGAGAGTGCGAGCTTCCGGCGGAAGCG
CGATGCTGCAGTTGCTTTGCAAACTTGGCGACGCGGGATAGCGGTTAGAG
CAAGCCTGGCCAAAAGCAAGGCGGCGGCGACACGGCTACAGGCGTGGACT
CGGGCTGCTTTCGCGTGCCAGCGCTACCGCCAGGCCATCTCGGCTTCCGT
TGTCATCCAAACGCGATGGCGTGGCGCTATGGCATCTTCGTTATACCGTA
TCCAACGTGCTTCTACCGTGACGATCCAGGCTCGTTGGCGCGGTGCGGTG
GGCCTTGCTCTGTACCACAAGCAGCGCGCAGCCGCGGTCGTTGTCCAGAG
CACTTGGCGTGCTCACCGAGCGCGGCGCGCGTTTTTCTGTCAGGTAGAAC
AGGTGACGCGGCTACAGGGCTGGTGGCGTACGATCGCCGCTCGAGAGCAT
TTGCGAGAACTCCGCCAGCTTGCACTCAATCGAAAACGGTATCGATCTGC
AGTATGCCTGCAGGCGCTGTGGCGTGCGGCAATGGTTCGAGCTCTCCGCC
GGAAAGCCCTCTTCGGGGTGGTTCAGCTACAGGCCGTGGCAAGGGGAGTA
TCCACGAGAGCCCGCCTTGAGCAAGAATGGGTGGAGCAGGAACGCATGGA
GCGTGAGCAGCAACGGGCGGCCATCACCTTGCAGGCATTTGCGCGCGCCG
TGGCCACGAAGCGAGCTCTTCGGAAAGCCCATGCGGGCGCGGTTGTCCTG
CAGATGTGGCAGCGCGGCCGACTCGCGCGACAAGCTGTGGCGGTGGTAAA
GGCCGCGAAGGAGGAACAAGAGCGCCAGACAGCAGCAGCGGCGGCGGCGG
CGGCGGCTGTCGTAATACAGGCGATGGCGCGGGGTCTTGCCGCTCGTCGT
GTACTGGAAGCTGAGACCGCGGCCGCGGTCACGTTGCAGAACTTCGTCAG
GGCAACGGAGGCAAGGGTGGAGCTTTCTCGTATGCGCGCCGAGAGAGCTC
ATACGGTTGAGCTGTCTCGGCGACGATCGGCCGCCGCGGTTAGGATTCAG
TGCGCTACAAGGGCCGCCGCGGCTGGAGCCATGGTCCGAAAAATGAAGGA
GGTCAAGGCGAGGCGTATCGAGGAAGAAACGAAAGCCGCAGTGATGATCC
AGGCTGCGTGGCGAGGTTCCACGGGACGGGTTCGGGCGAAGAAGACCCTG
GCCCGCAAGATCATCGCTGCGATGGCAGCGGAGCAAGCCGCGGAGAAAGC
TAGAGTGGCGGCCACGACCCTTCAGGCTTGCGCTCGAGGACGCCGAGCTA
GGCAAGTCTTGCGCCGGTCTGTGTGGGTCGTCGTTGCTGTCCAGACGCGC
TGGCGTGCGCTCGCCGCGGGACGGGAGGTCGCCGGTAGGAGGGCCGCCGC
TGCAGCCCAGCACACTGCTTTGCAATGGTCGGCGGCTGTACGGCTGCAGG
CGTTTGTGCGTGGGGTAGTGTCAGTCGCGCGGTACCGTAGGTCTCTCTCG
GCCACGAGGGTGCTGCAGGCCCGTTGGCGTGGAGTGTCGACGAGGATTCG
TATGGCCGCCGAAGCCGCGAAGATACAGACGGAGCGTGAAGAGCGAGCGG
CCGTGAGGCTGCAAGCGATGGCTCGCGGGCGGTGGTCGGCCCAGCGCGCA
GCATTCGTACGTGTGGTTGCACAGAGGGAGAACGCTGCTACCACTGTGCA
AACTTCGTGGAGGCAGGTTGCTGTGCGCGCGAAATGGTCAAGGGCAAGAA
ACGGAATGGTCGCCCTGCAAGCCTTATGCAGGGGGCGTGCCGCGCGCCAG
ACTATGGCTCGAGAAATGCCTGCCTCAACATTGCTGGGTGCCTGGTGGCG
AGCGAAGCGAGGGGCTAACCGCTTCCTCGTGGCCAGGCGAGGGGTCGTGG
CGCTGCAGAGCGTGGTGCGCGGGAGGCTCGTCCGGCGGGAGAGTGCGGCG
GTATTGCAAGAGCTCCATCGGCGGCTCTCGCAGCATGCGGCAGCTACTAG
AATCCAGAAACGGAATGGTCGCCCTGCAAGCCTTATGCAGGGGGCGTGCC
GCGCGCCAGACTATGGCTCGAGAAATGCCTGCCTCAACATTGCTGGGTGC
CTGGTGGCGAGCGAAGCGAGGGGCTAACCGCTTCCTCGTGGCCAGGCGAG
GGGTCGTGGCGCTGCAGAGCGTGGTGCGCGGGAGGCTCGTCCGGCGGGAG
AGTGCGGCGGTATTGCAAGAGCTCCATCGGCGGCTCTCGCAGCATGCGGC
AGCTACTAGAATCCAGGCCGCTGTGCGTGGACGGAGGATGCGACGGGCTG
CCGGCGCGAAGGTTGCAAACGCTCGAGCGAGGCTGGCCGAGGCTGAAGAT
CGACGGCGTGCGGATCCCTCTCTTGCCCTCGGGGTTCGGCCGCTGTGCGT
GGACGGAGGATGCGACGGGCTGCCGGCGCGAAGGTTGCAAACGCTCGAGC
GAGGCTGGCCGAGGCTGAAGATCGACGGCGTGCGGATCCCTCTCTTGCCC
TCGGGGTTCGGATTGAGTCTGCTCTTAAGTCATTGGAGCATGGTACACAT
CTCACAACGATCATACGTGCTTGCATCACGCTAGGATTGAGTCTGCTCTT
AAGTCATTGGAGCATGGTACACATCTCACAACGATCATACGTGCTTGCAT
CACGCTAGAGCTGTCGACAAGGTACTCTAAGGTGTGCTGCCAGGTGATAG
CCGAGTCGAGGGCGCCGCGCGTCCTGTACGATTTAGTGCGAGGCCTAAAC
CGGAGTCCTCCGCATCAAAAGATTCTCAAAGCTGTCGACAAGGTACTCTA
AGGTGTGCTGCCAGGTGATAGCCGAGTCGAGGGCGCCGCGCGTCCTGTAC
GATTTAGTGCGAGGCCTAAACCGGAGTCCTCCGCATCAAAAGATTCTCAA
ATACACGATCACTACCTTCCGGAACCTGGTCCAGCGTGGAGGAACAATGC
CAGGTCTCGTGGCCGCGCCCCCACTCGCCACGGAAACGTTCCTCGACCTG
CTCCAGATACACGATCACTACCTTCCGGAACCTGGTCCAGCGTGGAGGAA
CAATGCCAGGTCTCGTGGCCGCGCCCCCACTCGCCACGGAAACGTTCCTC
GACCTGCTCCAGATGTATCGCGAGCGGCAAGAAGTATTTGTCCCCACCGC
GCGCCTGCTACAGCAACTCGTGGCCGTGCACAAACCCACCAAGATGTATC
GCGAGCGGCAAGAAGTATTTGTCCCCACCGCGCGCCTGCTACAGCAACTC
GTGGCCGTGCACAAACCCACCAAGGACGCATGCAACGAAATCAAGAATTC
GCAGCGACTGGACAGCATCTCAGATATCCTCGCGCGGAAGGCGGCCGCCG
AGTGTAAGAGTAGCGGCGGTCGAGGCTCCCCGGTGAAGGTCCAAGGTGGC
GGACGAAGTTCCCCCCAGAAGAGCGAGGGCAGTGGTGCTCGAGTTTCCCC
AGCGAAGAGCCAAACAAACGGTAGTCGACCTTCCCCGGCGAAAAGCCAAG
CTGGCGGCGGCAGCGTGAAGGGTGTCGGTTCGCCGGTGAAATGCCAGAGG
AACGGGGGCGGCCTAAAGGGTGTCGGTTCGCCGGTGAAATGCCAGAGTAA
CGGCGGCAGCCTGAAGGGTGTCGGTTCACCGGCGAAGAGTCAGGCTGGCG
GCGGCGGCGGAAGCCTGAGGGGTGTCGGTTCGCCTGTGAAAAGGAGTGGT
GGCGGTTACATGGGCGGGGGGAATGGTGGCAACGGCAAGAATTCTAGGTC
TTTGAAGGCTATCCATCTGCTGATGCAAGAACTAGCGCGGGAGTGAGACG
CATGCAACGAAATCAAGAATTCGCAGCGACTGGACAGCATCTCAGATATC
CTCGCGCGGAAGGCGGCCGCCGAGTGTAAGAGTAGCGGCGGTCGAGGCTC
CCCGGTGAAGGTCCAAGGTGGCGGACGAAGTTCCCCCCAGAAGAGCGAGG
GCAGTGGTGCTCGAGTTTCCCCAGCGAAGAGCCAAACAAACGGTAGTCGA
CCTTCCCCGGCGAAAAGCCAAGCTGGCGGCGGCAGCGTGAAGGGTGTCGG
TTCGCCGGTGAAATGCCAGAGGAACGGGGGCGGCCTAAAGGGTGTCGGTT
CGCCGGTGAAATGCCAGAGTAACGGCGGCAGCCTGAAGGGTGTCGGTTCA
CCGGCGAAGAGTCAGGCTGGCGGCGGCGGCGGAAGCCTGAGGGGTGTCGG
TTCGCCTGTGAAAAGGAGTGGTGGCGGTTACATGGGCGGGGGGAATGGTG
GCAACGGCAAGAATTCTAGGTCTTTGAAGGCTATCCATCTGCTGATGCAA
GAACTAGCGCGGGAGTGA
back to top