prot_H-paniculata_contig27186.7436.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27186.7436.1
Unique Nameprot_H-paniculata_contig27186.7436.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length147
Homology
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: D8LNR1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR1_ECTSI)

HSP 1 Score: 142 bits (359), Expect = 6.960e-41
Identity = 81/152 (53.29%), Postives = 104/152 (68.42%), Query Frame = 0
Query:    3 DVSSHTLPASFVFLAVQLAFRKPLTVQKTSKNASSKRSQQRALENTERR--------LTKGGAFLPSDVALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDVSPFLAGLACDRFL 146
            + SS+TLPA+F F+AVQL F+   T Q T K    KR + +    T+R+         T  G +LP+DVA K  ILAA+KDLHGE+ S+ Y VDVLSWD  SG+G+LRV   SLVPIRAAL+ V S GD+ C++ V +VSPFLAGLAC+R+L
Sbjct:    2 EASSYTLPAAFCFIAVQLTFQ--ATRQATPKRP--KRGKVKGGGTTQRQQQAPQGSAATSQGVYLPTDVAFKTFILAAVKDLHGEVGSLAYPVDVLSWDAVSGEGRLRVPARSLVPIRAALSFVGSCGDVPCAIDVREVSPFLAGLACERYL 149          
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: UPI001C64A4DA (ribonuclease P protein subunit p14 n=1 Tax=Centrocercus urophasianus TaxID=9002 RepID=UPI001C64A4DA)

HSP 1 Score: 57.8 bits (138), Expect = 7.240e-8
Identity = 38/92 (41.30%), Postives = 50/92 (54.35%), Query Frame = 0
Query:   50 RRLTKGGAFLPSDVALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDVSPFLAGLA 141
            RR    GA  P    LK L++AAL++LHGE+      VDVL+++  S    LRV    LV + +ALTL   Y +  C+  V   SPFL  LA
Sbjct:   33 RRELPDGAARPGAPQLKQLVVAALRELHGEV-GAALPVDVLAYEEKSLCAVLRVISGGLVKLWSALTLQGFYQNRRCAFRVLQTSPFLLALA 123          
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: UPI0003C10CDB (ribonuclease P protein subunit p14 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C10CDB)

HSP 1 Score: 56.2 bits (134), Expect = 2.900e-7
Identity = 32/76 (42.11%), Postives = 48/76 (63.16%), Query Frame = 0
Query:   66 KGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDVSPFLAGLA 141
            K LI+AALK+LHGE  +     DVL+++  +    +RV  S LV + +A+TL+  Y +  C++ VT VSPFL  L+
Sbjct:   51 KQLIIAALKELHGETGAALPF-DVLTFEEKTTSAIVRVYSSGLVKLWSAITLLGYYQNQKCAIRVTQVSPFLLALS 125          
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: A0A7K9YJJ3_9GALL (RPP14 protein (Fragment) n=7 Tax=Galliformes TaxID=8976 RepID=A0A7K9YJJ3_9GALL)

HSP 1 Score: 56.2 bits (134), Expect = 3.020e-7
Identity = 39/89 (43.82%), Postives = 50/89 (56.18%), Query Frame = 0
Query:   56 GAFLPSDVALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDV---SPFLAGLA 141
            GA  P    LK L+LAAL++LHGE+      VDVL+++  S    LRV  S LV + +ALTL   Y +  C+  V  V   SPFL  LA
Sbjct:   40 GAARPGAPQLKQLVLAALRELHGEV-GAALPVDVLAYEEKSLCAILRVVSSGLVKLWSALTLQGFYQNRRCAFRVLQVGGTSPFLLALA 127          
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: A0A4W3J7P9_CALMI (Uncharacterized protein n=5 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3J7P9_CALMI)

HSP 1 Score: 55.1 bits (131), Expect = 7.520e-7
Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 0
Query:   63 VALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDVSPFLAGLACD 143
            V  K LI+AAL+DLHGE+      VDVL+++       LRV    LV + +ALTL+  Y    C+  V  VSPFL  L+ D
Sbjct:   40 VQFKHLIVAALRDLHGEI-GAALPVDVLTFEEEILSAILRVQNRGLVKLWSALTLLGCYQGQKCAFRVLQVSPFLLALSGD 119          
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: A0A226PF64_COLVI (Uncharacterized protein n=1 Tax=Colinus virginianus TaxID=9014 RepID=A0A226PF64_COLVI)

HSP 1 Score: 55.5 bits (132), Expect = 9.670e-7
Identity = 37/85 (43.53%), Postives = 47/85 (55.29%), Query Frame = 0
Query:   56 GAFLPSDVALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDVSPFLAGL 140
            GA  P    LK L+LAAL++LHGE+      VDVL++D  S    LRV  S LV + +ALTL  SY +  C+  V     F A L
Sbjct:   34 GAARPGAPQLKQLVLAALRELHGEV-GAALPVDVLAYDEKSLSAILRVVSSGLVKLWSALTLQGSYQNRRCAFRVLQEIRFPAPL 117          
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: UPI0004574E47 (ribonuclease P protein subunit p14 isoform X1 n=1 Tax=Callorhinchus milii TaxID=7868 RepID=UPI0004574E47)

HSP 1 Score: 55.1 bits (131), Expect = 1.050e-6
Identity = 35/81 (43.21%), Postives = 46/81 (56.79%), Query Frame = 0
Query:   63 VALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDVSPFLAGLACD 143
            V  K LI+AAL+DLHGE+      VDVL+++       LRV    LV + +ALTL+  Y    C+  V  VSPFL  L+ D
Sbjct:   58 VQFKHLIVAALRDLHGEI-GAALPVDVLTFEEEILSAILRVQNRGLVKLWSALTLLGCYQGQKCAFRVLQVSPFLLALSGD 137          
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: A0A226NF70_CALSU (Uncharacterized protein n=1 Tax=Callipepla squamata TaxID=9009 RepID=A0A226NF70_CALSU)

HSP 1 Score: 54.3 bits (129), Expect = 3.430e-6
Identity = 35/78 (44.87%), Postives = 44/78 (56.41%), Query Frame = 0
Query:   56 GAFLPSDVALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDV 133
            GA  P    LK L+LAAL++LHGE+      VDVL +D  S    LRV  S LV + +ALTL  SY +  C+  V  V
Sbjct:   96 GAARPGAPQLKQLVLAALRELHGEV-GAALPVDVLVYDEKSLSAILRVVSSGLVKLWSALTLQGSYQNRRCAFRVLQV 172          
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: A0A7L0PTX3_9AVES (RPP14 protein (Fragment) n=2 Tax=Neognathae TaxID=8825 RepID=A0A7L0PTX3_9AVES)

HSP 1 Score: 52.0 bits (123), Expect = 1.120e-5
Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = 0
Query:   52 LTKGGAFLPSDVALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDVSP 135
            L  GGA  PS    K L++AAL++LHGE+      VDVL+++  +    LRV  S LV + +ALTL+  Y +  C+  V  V P
Sbjct:   33 LPDGGAR-PSVAQFKQLVVAALRELHGEV-GAALPVDVLTYEEKTLSAILRVISSGLVKLWSALTLLGFYQNRRCAFRVLQVKP 114          
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Match: A0A2P4S7D7_BAMTH (Uncharacterized protein n=1 Tax=Bambusicola thoracicus TaxID=9083 RepID=A0A2P4S7D7_BAMTH)

HSP 1 Score: 51.6 bits (122), Expect = 1.600e-5
Identity = 33/78 (42.31%), Postives = 45/78 (57.69%), Query Frame = 0
Query:   56 GAFLPSDVALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQLRVAVSSLVPIRAALTLVSSYGDILCSVHVTDV 133
            GA  P    LK L++AAL++LHGE+      VDVL+++  S    LRV  S LV + +ALTL  SY +  C+  V  V
Sbjct:   34 GAARPGAPQLKQLVVAALRELHGEV-GAALPVDVLAYEEKSLCAILRVVSSGLVKLWSALTLQGSYQNRRCAFRVLQV 110          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27186.7436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
D8LNR1_ECTSI6.960e-4153.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001C64A4DA7.240e-841.30ribonuclease P protein subunit p14 n=1 Tax=Centroc... [more]
UPI0003C10CDB2.900e-742.11ribonuclease P protein subunit p14 n=1 Tax=Latimer... [more]
A0A7K9YJJ3_9GALL3.020e-743.82RPP14 protein (Fragment) n=7 Tax=Galliformes TaxID... [more]
A0A4W3J7P9_CALMI7.520e-743.21Uncharacterized protein n=5 Tax=Callorhinchus mili... [more]
A0A226PF64_COLVI9.670e-743.53Uncharacterized protein n=1 Tax=Colinus virginianu... [more]
UPI0004574E471.050e-643.21ribonuclease P protein subunit p14 isoform X1 n=1 ... [more]
A0A226NF70_CALSU3.430e-644.87Uncharacterized protein n=1 Tax=Callipepla squamat... [more]
A0A7L0PTX3_9AVES1.120e-540.48RPP14 protein (Fragment) n=2 Tax=Neognathae TaxID=... [more]
A0A2P4S7D7_BAMTH1.600e-542.31Uncharacterized protein n=1 Tax=Bambusicola thorac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038085Rnp2-like domain superfamilyGENE3D3.30.70.3250coord: 54..144
e-value: 2.6E-6
score: 29.4
IPR038085Rnp2-like domain superfamilySUPERFAMILY160350Rnp2-likecoord: 60..139
IPR002759Ribonuclease P/MRP protein subunitPFAMPF01900RNase_P_Rpp14coord: 64..134
e-value: 1.7E-5
score: 25.0
NoneNo IPR availablePANTHERPTHR15441FAMILY NOT NAMEDcoord: 63..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..146
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..23

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27186contigH-paniculata_contig27186:1666..2809 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27186.7436.1mRNA_H-paniculata_contig27186.7436.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27186 1388..2914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27186.7436.1 ID=prot_H-paniculata_contig27186.7436.1|Name=mRNA_H-paniculata_contig27186.7436.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=147bp
MADVSSHTLPASFVFLAVQLAFRKPLTVQKTSKNASSKRSQQRALENTER
RLTKGGAFLPSDVALKGLILAALKDLHGEMESVTYLVDVLSWDPASGKGQ
LRVAVSSLVPIRAALTLVSSYGDILCSVHVTDVSPFLAGLACDRFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038085Rnp2-like_sf
IPR002759RNase_P/MRP_subunit