prot_H-paniculata_contig2718.7434.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2718.7434.1
Unique Nameprot_H-paniculata_contig2718.7434.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length412
Homology
BLAST of mRNA_H-paniculata_contig2718.7434.1 vs. uniprot
Match: D7FJ95_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ95_ECTSI)

HSP 1 Score: 273 bits (698), Expect = 1.110e-84
Identity = 181/368 (49.18%), Postives = 220/368 (59.78%), Query Frame = 0
Query:   58 LRLAALPDVVLAHVLAFFPSVTDLMNAITVCRAWVIEGDRTELWKHLGKSFQVAMPSALG---RSRADDS---------GKRMLRSASNAKRTFFKAIAAELVAHRLKHDGTLSEAYTLFRMADSVAKLKSLLRSRWGVMINISTSRGSAAKAIRGASSILEQTGKEKRRGWGGRKGNKG----GKGDTDSC----GPSLRCRRGAGARASRESAPTARAAGCLWVAGTGRWKFDVNYRHTIYEGNTLLNFAVRCGRRNTVEFIIRQMGADPEAADDGGFTPLLNAAWRGDAALVQQLYDAGASLDVKGTSRGEGPYSPIEWAERKDRPRTAQVLSELLAAEAQDGNMNGA------TGNSKEVKLPR 399
            L LA +PD  LA V +F  +V DL++A  VCR WV++G R +LW  LGK F+VAMP +LG     RA  S         GKR+LRS +NAKRTF K+ AA + + RLKHD TLSEAYTLFRM DSV +L++LLR RWG+  + S S+    K I       E +            G  G        T +C      +L+ R  AGA   R            W +G  RW F+V++RH I+EGNTLLNFAVRCGRR  VEFI+ QMGAD E AD GGFTPLLN AWRGDA L++ L  AGA LDVKG SRG GP+SP+EWAERK+RP TA  L  L A E + G+  GA       G SK VK P+
Sbjct:   43 LPLAFIPDGALAIVFSFV-AVNDLLSANKVCRDWVLDGTRVDLWASLGKIFEVAMPVSLGPQTSQRAAGSTGATAGGGRGKRVLRSGANAKRTFLKSYAAAVKSDRLKHDSTLSEAYTLFRMKDSVMRLRTLLRRRWGLTFHPS-SKPDQNKRIEN----YESSXXXXXXXXXXXSGELGLFFPTATATSNCLSGTAATLKARTNAGADKDRARG--------TW-SGKARWSFNVDHRHGIFEGNTLLNFAVRCGRRKCVEFILWQMGADTEIADYGGFTPLLNTAWRGDAPLLKTLLAAGARLDVKGVSRGVGPFSPLEWAERKNRPVTAAFLRSLEAREEEGGSAEGAGPGRGNNGKSK-VKAPK 394          
BLAST of mRNA_H-paniculata_contig2718.7434.1 vs. uniprot
Match: A0A6H5KSU2_9PHAE (F-box domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSU2_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 1.360e-33
Identity = 102/244 (41.80%), Postives = 133/244 (54.51%), Query Frame = 0
Query:   58 LRLAALPDVVLAHVLAFFPSVTDLMNAITVCRAWVIEGDRTELWKHLGKSFQVAMPSALG---RSRADDS---------GKRMLRSASNAKRTFFKAIAAELVAHRLKHDGTLSEAYTLFRMADSVAKLKSLLRSRWGVMINISTSRGSAAKAIRGASSILEQTGKEKRRGWGGRKGNKGGKGDTDSCGPSLRCRRGAGARASRESAPTARAAGCLWVAGTGRWKFDVNYRHTIYEGNTLLNFA 289
            L LA +PD  LA V +F  +V DL++A  VCR WV++G R  LW  LGK F+V MP +LG     RA  S         GKR+LRS +NAKRTF K+ AA + + RLKHD TLSEAYTLFRM DSV +L++LLR RWG+  + S S+    K I    S    +G               G     +   S           +R +A + +       +G  RW F+V++RH I+EGNTLLNFA
Sbjct:    9 LPLAFIPDGALAIVFSFL-AVNDLLSANKVCRDWVLDGTRVNLWASLGKIFEVTMPVSLGPQTSQRAAGSNGATAGGGRGKRVLRSGANAKRTFLKSYAAAVKSDRLKHDSTLSEAYTLFRMKDSVMRLRTLLRRRWGLTFHPS-SKPDQNKRIENCES---SSGXXXXXXXXXXXXXXLGLFIPTATATSSYLSGTVATLKARTNAESDKDKARGTWSGKARWSFNVDHRHGIFEGNTLLNFA 247          
BLAST of mRNA_H-paniculata_contig2718.7434.1 vs. uniprot
Match: A0A7S2CKH5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CKH5_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 2.180e-8
Identity = 39/102 (38.24%), Postives = 51/102 (50.00%), Query Frame = 0
Query:  281 EGNTLLNFAVRCGRRNTVEFIIRQMGADPEAADDGGFTPLLNAAWRGDAALVQQLYDAGASLDVKGTSRGEGPY-----SPIEWAERKDRPRTAQVLSELLA 377
            E N  LN AV   R N V  ++R+ GAD   AD GGF+PL++AAW GDA +V  L   GA  D  G S   G       +  EWA  +     A+ +   +A
Sbjct:    2 ERNPALNLAVMHRRHNCVAELLRR-GADVNLADRGGFSPLMDAAWNGDATMVVTLLKYGADPDAVGHSHFSGGIKTTERTAAEWARIRGHVEVAEHIENWVA 102          
BLAST of mRNA_H-paniculata_contig2718.7434.1 vs. uniprot
Match: A0A7S2KPF6_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KPF6_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.140e-7
Identity = 39/112 (34.82%), Postives = 60/112 (53.57%), Query Frame = 0
Query:  270 KFDVNY-RHTIYEGNTLLNFAVRCGRRNTVEFIIRQMGADPEAADDGGFTPLLNAAWRGDAALVQQLYDAGASLDVKGTSRGEGPYSPI--------EWAERKDRPRTAQVL 372
            +F +NY    + E ++LLN AV   R   V++++ + GAD E +D GGFTPLLNAA+ GD A+V+ L   G +    GT       + I        EWA ++     A+++
Sbjct:  274 RFSINYVSGVVLERSSLLNLAVMNKRHKIVKWLMER-GADIETSDRGGFTPLLNAAYVGDKAMVRYLLSKGCNRHKVGTEHSTQALAHISFKGHTAEEWARKRGYGDVAELI 384          
BLAST of mRNA_H-paniculata_contig2718.7434.1 vs. uniprot
Match: A0A7L0X9M2_TYRSA (ANR16 protein (Fragment) n=1 Tax=Tyrannus savana TaxID=137541 RepID=A0A7L0X9M2_TYRSA)

HSP 1 Score: 57.8 bits (138), Expect = 1.570e-5
Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 0
Query:  282 GNTLLNFAVRCGRRNTVEFIIRQMGADPEAADDGGFTPLLNAAWRGDAALVQQLYDAGASLDVKGTSRGEGPYSPIEWAERKDRPRTAQVLSELL 376
            G+TL++ A R G R+ +EF++R++G DPEAA+     PL  AA  G    V  L D+GAS+D       +G ++P+  A  +   R  QV+  L+
Sbjct:   34 GDTLVHHAARLGHRDVLEFLLRELGMDPEAANRDYKRPLHEAASMGHGRCVSFLLDSGASVDCL----KKGDWTPLMMACTR---RNLQVIRSLV 121          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2718.7434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FJ95_ECTSI1.110e-8449.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KSU2_9PHAE1.360e-3341.80F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2CKH5_9STRA2.180e-838.24Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2KPF6_9STRA3.140e-734.82Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7L0X9M2_TYRSA1.570e-536.84ANR16 protein (Fragment) n=1 Tax=Tyrannus savana T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 281..311
e-value: 9.8
score: 15.1
coord: 315..344
e-value: 0.59
score: 19.2
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 315..347
score: 10.205
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 271..345
e-value: 3.7E-6
score: 27.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 281..347
score: 16.892
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 255..377
e-value: 1.6E-18
score: 68.9
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 272..373
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 272..374
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 272..374
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..411
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
IPR001810F-box domainPROSITEPS50181FBOXcoord: 57..104
score: 8.597
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 45..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2718contigH-paniculata_contig2718:9903..16954 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2718.7434.1mRNA_H-paniculata_contig2718.7434.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2718 8984..17165 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2718.7434.1 ID=prot_H-paniculata_contig2718.7434.1|Name=mRNA_H-paniculata_contig2718.7434.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=412bp
MSGVFLPCSQIAAFSSQLSSDCVGFSETASPTEPPAKVAPPGNPSDCSSL
PVHSRSPLRLAALPDVVLAHVLAFFPSVTDLMNAITVCRAWVIEGDRTEL
WKHLGKSFQVAMPSALGRSRADDSGKRMLRSASNAKRTFFKAIAAELVAH
RLKHDGTLSEAYTLFRMADSVAKLKSLLRSRWGVMINISTSRGSAAKAIR
GASSILEQTGKEKRRGWGGRKGNKGGKGDTDSCGPSLRCRRGAGARASRE
SAPTARAAGCLWVAGTGRWKFDVNYRHTIYEGNTLLNFAVRCGRRNTVEF
IIRQMGADPEAADDGGFTPLLNAAWRGDAALVQQLYDAGASLDVKGTSRG
EGPYSPIEWAERKDRPRTAQVLSELLAAEAQDGNMNGATGNSKEVKLPRT
TSSKRNVIGDV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf
IPR001810F-box_dom
IPR036047F-box-like_dom_sf