prot_H-paniculata_contig27130.7424.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27130.7424.1
Unique Nameprot_H-paniculata_contig27130.7424.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length77
Homology
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: A0A067DPV9_CITSI (MCM domain-containing protein (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067DPV9_CITSI)

HSP 1 Score: 80.9 bits (198), Expect = 5.100e-18
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   15 LAKGLKSSQCCVFNICAKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            +  GL S+   +     KDGGEWMLEAGALVLAD GLCCIDEF ++REHDRATIHE
Sbjct:   19 ITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHE 74          
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: D8LM73_ECTSI (MCM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM73_ECTSI)

HSP 1 Score: 85.9 bits (211), Expect = 7.830e-18
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
Query:   32 KDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            KDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE
Sbjct:  398 KDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 436          
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: A0A835Z090_9STRA (MCM2/3/5 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z090_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 7.830e-18
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0
Query:   32 KDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            KDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE
Sbjct:  563 KDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 601          
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: UPI000B8CE6B4 (probable DNA helicase MCM9 n=1 Tax=Carica papaya TaxID=3649 RepID=UPI000B8CE6B4)

HSP 1 Score: 80.9 bits (198), Expect = 2.820e-17
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   15 LAKGLKSSQCCVFNICAKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            +  GL S+   +     KDGGEWMLEAGALVLAD GLCCIDEF ++REHDRATIHE
Sbjct:   19 ITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHE 74          
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: A0A1D6LVG3_MAIZE (Putative DNA helicase MCM9 n=1 Tax=Zea mays TaxID=4577 RepID=A0A1D6LVG3_MAIZE)

HSP 1 Score: 79.3 bits (194), Expect = 1.440e-16
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   15 LAKGLKSSQCCVFNICAKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            +  GL S+   +     KDGGEWMLEAGALVLAD GLCCIDEF ++REHDR TIHE
Sbjct:  133 ITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRTTIHE 188          
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: A0A2G2VAJ7_CAPBA (Putative DNA helicase MCM9 n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VAJ7_CAPBA)

HSP 1 Score: 80.9 bits (198), Expect = 1.530e-16
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   15 LAKGLKSSQCCVFNICAKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            +  GL S+   +     KDGGEWMLEAGALVLAD GLCCIDEF ++REHDRATIHE
Sbjct:  104 ITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHE 159          
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: A0A426YIB0_ENSVE (MCM domain-containing protein (Fragment) n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426YIB0_ENSVE)

HSP 1 Score: 80.9 bits (198), Expect = 1.620e-16
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   15 LAKGLKSSQCCVFNICAKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            +  GL S+   +     KDGGEWMLEAGALVLAD GLCCIDEF ++REHDRATIHE
Sbjct:  141 ITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHE 196          
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: A0A0K9PHI8_ZOSMR (DNA helicase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PHI8_ZOSMR)

HSP 1 Score: 82.0 bits (201), Expect = 1.750e-16
Identity = 41/61 (67.21%), Postives = 46/61 (75.41%), Query Frame = 0
Query:   10 HTSVALAKGLKSSQCCVFNICAKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            H SV +  GL S+   +     KDGGEWMLEAGALVLAD GLCCIDEF ++REHDRATIHE
Sbjct:  409 HRSV-ITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHE 468          
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: A0A067DQ65_CITSI (MCM domain-containing protein (Fragment) n=1 Tax=Citrus sinensis TaxID=2711 RepID=A0A067DQ65_CITSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.770e-16
Identity = 38/56 (67.86%), Postives = 43/56 (76.79%), Query Frame = 0
Query:   15 LAKGLKSSQCCVFNICAKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            +  GL S+   +     KDGGEWMLEAGALVLAD GLCCIDEF ++REHDRATIHE
Sbjct:   19 ITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHE 74          
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Match: A0A453R4L7_AEGTS (MCM domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453R4L7_AEGTS)

HSP 1 Score: 79.3 bits (194), Expect = 1.940e-16
Identity = 37/56 (66.07%), Postives = 42/56 (75.00%), Query Frame = 0
Query:   15 LAKGLKSSQCCVFNICAKDGGEWMLEAGALVLADRGLCCIDEFSAIREHDRATIHE 70
            +  GL S+   +     KDGGEWMLEAGALVLAD GLCCIDEF ++REHDR TIHE
Sbjct:   15 ITTGLGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRTTIHE 70          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27130.7424.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067DPV9_CITSI5.100e-1867.86MCM domain-containing protein (Fragment) n=1 Tax=C... [more]
D8LM73_ECTSI7.830e-18100.00MCM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835Z090_9STRA7.830e-18100.00MCM2/3/5 family-domain-containing protein n=1 Tax=... [more]
UPI000B8CE6B42.820e-1767.86probable DNA helicase MCM9 n=1 Tax=Carica papaya T... [more]
A0A1D6LVG3_MAIZE1.440e-1666.07Putative DNA helicase MCM9 n=1 Tax=Zea mays TaxID=... [more]
A0A2G2VAJ7_CAPBA1.530e-1667.86Putative DNA helicase MCM9 n=1 Tax=Capsicum baccat... [more]
A0A426YIB0_ENSVE1.620e-1667.86MCM domain-containing protein (Fragment) n=1 Tax=E... [more]
A0A0K9PHI8_ZOSMR1.750e-1667.21DNA helicase n=1 Tax=Zostera marina TaxID=29655 Re... [more]
A0A067DQ65_CITSI1.770e-1667.86MCM domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A453R4L7_AEGTS1.940e-1666.07MCM domain-containing protein n=1 Tax=Aegilops tau... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 4..73
e-value: 5.1E-18
score: 67.3
NoneNo IPR availablePANTHERPTHR11630:SF48DNA HELICASE MCM9coord: 30..70
IPR001208MCM domainPFAMPF00493MCMcoord: 30..71
e-value: 7.5E-14
score: 51.4
IPR001208MCM domainPROSITEPS50051MCM_2coord: 35..71
score: 17.353
IPR031327Mini-chromosome maintenance proteinPANTHERPTHR11630DNA REPLICATION LICENSING FACTORcoord: 30..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27130contigH-paniculata_contig27130:2890..3120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27130.7424.1mRNA_H-paniculata_contig27130.7424.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27130 2878..3120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27130.7424.1 ID=prot_H-paniculata_contig27130.7424.1|Name=mRNA_H-paniculata_contig27130.7424.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=77bp
MVRFEHVCYHTSVALAKGLKSSQCCVFNICAKDGGEWMLEAGALVLADRG
LCCIDEFSAIREHDRATIHEVHVKLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001208MCM_dom
IPR031327MCM