mRNA_H-paniculata_contig27110.7420.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: D7FLI0_ECTSI (Histone acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI0_ECTSI) HSP 1 Score: 215 bits (548), Expect = 3.610e-65 Identity = 106/148 (71.62%), Postives = 116/148 (78.38%), Query Frame = 1
Query: 1 VLPLERCLDRHRLGLQRPLGGFGVGGHDGQAHTEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGAQPPGEDDGWGIGSSISRYSTVDAAIR 444
V+PL RC D+ RLGL GG G G AH+EVVYILTLGTET YRR+GIGRALLRRCVWLSR E SIGAVYLHVITTNP AHRFYE+EGFVQVCCI DYY INGELYDC+LYA +VNGAQPPGE GWGI S R ++ + R
Sbjct: 171 VMPLSRCRDQDRLGLNTSYGGGG-----GAAHSEVVYILTLGTETRYRRQGIGRALLRRCVWLSRQEKSIGAVYLHVITTNPAAHRFYESEGFVQVCCISDYYRINGELYDCYLYALFVNGAQPPGER-GWGIQSLSRRLLSIISFFR 312
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: A0A6H5KX22_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX22_9PHAE) HSP 1 Score: 212 bits (540), Expect = 1.820e-63 Identity = 105/148 (70.95%), Postives = 116/148 (78.38%), Query Frame = 1
Query: 1 VLPLERCLDRHRLGLQRPLGGFGVGGHDGQAHTEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGAQPPGEDDGWGIGSSISRYSTVDAAIR 444
V+PL RC D+ RLGL GG G G AH+EVVYILTLGTET+YRR+GIGRALLRRCVWLSR E SIGAVYLHVITTNP AHRFYE+EGFVQVCCI DYY INGELYDC+LYA +VNGAQPP E GWGI S R ++ + R
Sbjct: 225 VMPLSRCRDQDRLGLNTSYGGRG-----GAAHSEVVYILTLGTETSYRRQGIGRALLRRCVWLSRQEKSIGAVYLHVITTNPAAHRFYESEGFVQVCCINDYYRINGELYDCYLYALFVNGAQPPREW-GWGIQSLSRRLLSIISFFR 366
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: A0A835ZFD1_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFD1_9STRA) HSP 1 Score: 103 bits (257), Expect = 5.140e-24 Identity = 50/93 (53.76%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 88 QAHTEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGA 366
Q H V YILTLG YRR G+G ALLRRCV +R E GAV+LHVIT N A FY GFV+VC + YY I+G + C++YA ++NGA
Sbjct: 110 QRHDMVAYILTLGVLDEYRRAGVGAALLRRCVAAARAEPRCGAVFLHVITYNAAAMAFYARAGFVRVCEVSGYYQIDGARHSCYVYALFLNGA 202
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: A0A484ECY0_BRELC (Histone acetyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECY0_BRELC) HSP 1 Score: 98.2 bits (243), Expect = 6.060e-22 Identity = 50/104 (48.08%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 82 DGQAHTEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGAQPPGEDDGW 393
D HT+++YILTLGT ++ RR GI ALL+ C+ + + GAVYLHV N A RFYE GF + ++DYY I+GE +D FLY YVNGA GW
Sbjct: 140 DDWEHTQIMYILTLGTRSSARRMGIATALLQECIAQACRQPQCGAVYLHVKADNLNARRFYEKNGFQNLRYLQDYYMIDGEPHDAFLYIRYVNGAT---SQSGW 240
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: F0YB42_AURAN (Histone acetyltransferase (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YB42_AURAN) HSP 1 Score: 94.7 bits (234), Expect = 1.380e-21 Identity = 46/91 (50.55%), Postives = 62/91 (68.13%), Query Frame = 1
Query: 97 TEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGAQ 369
+ V+Y+LTLG+ T YRRRGI + LLRRCV + EA GAVYLHVIT N A FYE F ++ I DYY I+G + C++YA +++ A+
Sbjct: 92 SRVMYVLTLGSATRYRRRGIAKELLRRCVLRAEAEAGCGAVYLHVITYNDAAIEFYERNDFSRLREIADYYRIDGASHACYVYALFLSRAR 182
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: M4BEK5_HYAAE (Histone acetyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BEK5_HYAAE) HSP 1 Score: 97.1 bits (240), Expect = 2.300e-21 Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 82 DGQAHTEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGAQP 372
D HT+++YILTLGT + RR GI LL C+ + + GAVYLHV N A FYE GF + ++DYY I+G +D FLY FY+NGA P
Sbjct: 139 DNCVHTQIMYILTLGTRASVRRMGIASRLLEECIAQACRQPECGAVYLHVKADNLSARHFYEKHGFQNLRYLQDYYMIDGVRHDAFLYIFYINGAAP 235
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: A0A7S2UNP6_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UNP6_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 4.020e-21 Identity = 49/116 (42.24%), Postives = 67/116 (57.76%), Query Frame = 1
Query: 82 DGQAHTEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGAQPPGEDDGWGIGSSISRYSTV 429
D H + YI+TLGT T YR+ G+ +L++RC+ + G +YLHVIT N A RFYE GF V I+DYY INGE ++C+LYA Y +G + W + S +S T
Sbjct: 213 DPDRHRRMFYIMTLGTITEYRKNGLATSLMKRCIEKIEQDPECGVIYLHVITYNKAAIRFYEKLGFYMVQEIKDYYTINGENHNCYLYAKYFHGNR-----GHWSLFSYLSGILTT 323
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: B5Y5M1_PHATC (Histone acetyltransferase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5M1_PHATC) HSP 1 Score: 93.2 bits (230), Expect = 6.730e-21 Identity = 44/94 (46.81%), Postives = 60/94 (63.83%), Query Frame = 1
Query: 88 QAHTEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGAQ 369
+ +T++ YI+TLGT T YR+ G+G +++RC+ G +YLHVIT N PA RFYE GF +V I DYY I+ + C+LYA Y NG Q
Sbjct: 96 ERYTQLFYIMTLGTVTHYRQSGLGTTMIQRCIEEVERHPECGVLYLHVITFNEPAIRFYEKLGFYRVQEIPDYYTIDDVNHSCYLYARYFNGMQ 189
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: A0A8K1CG95_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CG95_PYTOL) HSP 1 Score: 97.4 bits (241), Expect = 8.910e-21 Identity = 48/98 (48.98%), Postives = 59/98 (60.20%), Query Frame = 1
Query: 82 DGQAHTEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGAQPP 375
D HT +YILTLG+ ++ RRRGI ALL C+ +R + GAVYLHV N A RFYE GF + + DYY ING + +LY YVNGA P
Sbjct: 154 DDYIHTHAMYILTLGSRSSVRRRGIASALLAECIEEARRQPHCGAVYLHVKADNVQALRFYEKNGFQNLRYLHDYYTINGVRHSAYLYILYVNGAMGP 251
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Match: A0A3M6VIC6_9STRA (Histone acetyltransferase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VIC6_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.970e-20 Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 82 DGQAHTEVVYILTLGTETAYRRRGIGRALLRRCVWLSRHEASIGAVYLHVITTNPPAHRFYEAEGFVQVCCIEDYYNINGELYDCFLYAFYVNGAQP 372
D HTE++YILTLGT + RR GI AL++ C+ + + GAVYLHV N A FYE GF + ++DYY I+G +D LY YVNGA P
Sbjct: 137 DDWEHTEIMYILTLGTRVSVRRMGIASALIQECIAQACRQPQCGAVYLHVKADNLSARHFYEKNGFKNLRFLQDYYMIDGVRHDAVLYICYVNGAAP 233 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27110.7420.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27110.7420.1 >prot_H-paniculata_contig27110.7420.1 ID=prot_H-paniculata_contig27110.7420.1|Name=mRNA_H-paniculata_contig27110.7420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp VLPLERCLDRHRLGLQRPLGGFGVGGHDGQAHTEVVYILTLGTETAYRRRback to top mRNA from alignment at H-paniculata_contig27110:115..2355- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig27110.7420.1 ID=mRNA_H-paniculata_contig27110.7420.1|Name=mRNA_H-paniculata_contig27110.7420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2241bp|location=Sequence derived from alignment at H-paniculata_contig27110:115..2355- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig27110:115..2355- >mRNA_H-paniculata_contig27110.7420.1 ID=mRNA_H-paniculata_contig27110.7420.1|Name=mRNA_H-paniculata_contig27110.7420.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at H-paniculata_contig27110:115..2355- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |