mRNA_H-paniculata_contig2708.7412.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: D7FIK0_ECTSI (WD repeat membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK0_ECTSI) HSP 1 Score: 478 bits (1229), Expect = 1.760e-154 Identity = 235/267 (88.01%), Postives = 253/267 (94.76%), Query Frame = 3
Query: 3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYKV 803
MKQP EAA MYELGGQ+ RAAAIYVA KDL+KAA VMPRVT PKLLGQYAKACEITGRWE+ALEA+ERARDMDSVVRLCL QLD+ +AFAI+RE SS+GAEMVSR+CQDAGDW+GAIEFLL+A RTADAFSLAKSH +MD+FTKVLG +VSPDDALS+ARFYEG+HELGKAG+FYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALG+YSQAAKTAIIIAKQEQDLGNYKV
Sbjct: 958 MKQPAEAAAMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPKLLGQYAKACEITGRWEQALEAYERARDMDSVVRLCLDQLDQSHRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHARMDIFTKVLGTDVSPDDALSVARFYEGKHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKV 1224
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A6H5KE11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE11_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 5.460e-145 Identity = 233/340 (68.53%), Postives = 252/340 (74.12%), Query Frame = 3
Query: 3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRW-------------------------------------------------------------------------EEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYKV 803
MKQP EAA MYELGGQ+ RAAAIYVA KDL+KAA VMPRVT PKLLGQYAKACEITGR E+ALEA+ERARDMDSVVRLCL QLD+ +AFAI+RE SS+GAEMVSR+CQDAGDW+GAIEFLL+A RTADAF+LAKSH +MD+FTKVLG +VSPDDALS+ARFYEG+HELGKAG+FYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALG+YSQAAKTAIIIAKQEQDLGNYKV
Sbjct: 264 MKQPAEAAAMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPKLLGQYAKACEITGRCGGCRKRSSGQARRSVASPLATGTMFCEGESTSEDMKSDVSLSKPPTSASQKGRERLAINLAPCFDPGLVNIRLEQALEAYERARDMDSVVRLCLDQLDQSHRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFNLAKSHARMDIFTKVLGTDVSPDDALSVARFYEGKHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKV 603
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S2CHE3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHE3_9STRA) HSP 1 Score: 360 bits (924), Expect = 1.310e-118 Identity = 176/266 (66.17%), Postives = 223/266 (83.83%), Query Frame = 3
Query: 3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
MKQ +AA +YELG Q +RAAAI++ K+L +AA +MP+VT PKL +YA CE G++EEA+ ++E ARDMD+VVRLCL QL P++AF I+R T SS+GA++V+ YCQ G+++GAIEFLL+A + +AF+LAK+H MDV+TKVLG + P++A S+A FYEGQHELG+AG FYSLCGQ+ RALKLFLQCG++EV+ AI VVGKARNDMLTHTLIDFLMGETDGVPK+P +IYRLY+ALGNY+QAAKTAIIIA+QEQDLG Y+
Sbjct: 60 MKQSADAAVLYELGEQYERAAAIFIKTKNLVQAARIMPKVTQPKLHSEYALKCEKDGQFEEAVRSYEAARDMDAVVRLCLDQLSTPERAFEIVRATSSSTGAQLVAHYCQREGNFRGAIEFLLMAKCSEEAFALAKTHDCMDVYTKVLGDGIGPEEAQSVASFYEGQHELGQAGHFYSLCGQYARALKLFLQCGEKEVDRAIEVVGKARNDMLTHTLIDFLMGETDGVPKEPFHIYRLYLALGNYAQAAKTAIIIARQEQDLGKYR 325
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A835ZAW6_9STRA (WD repeat membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAW6_9STRA) HSP 1 Score: 363 bits (932), Expect = 2.560e-112 Identity = 181/279 (64.87%), Postives = 216/279 (77.42%), Query Frame = 3
Query: 3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLG-------------AEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
M+QP EAA ++E G +RA AIY+A +++ +AA V P+VTLPKLLGQYA+ACE G+W+ A AHERARDMD+VVRLCL QLD+P++AFAI+R T S++GAE VSRYC AGDW GAIEFLL+A R +AF LA++HGQM F + P DAL +AR+YE Q ELG AGR Y+ CGQHHRALKL LQ G+ EV AAI VVG+ARNDMLTHTLID+LMGETDGVPKDPN+IYRLY+ALGNY QAAKTAIIIA+QEQDLGNY+
Sbjct: 996 MRQPAEAAALWEASGHFERALAIYLAARNMPQAASVAPKVTLPKLLGQYARACEAAGQWDAAAAAHERARDMDAVVRLCLDQLDQPERAFAIVRATASAAGAETVSRYCAAAGDWGGAIEFLLMAQRADEAFELARAHGQMAAFVGARARGXXXXXXXXXXXGALPPADALRVARYYEAQGELGAAGRHYAACGQHHRALKLLLQRGEAEVAAAIDVVGRARNDMLTHTLIDYLMGETDGVPKDPNHIYRLYLALGNYQQAAKTAIIIARQEQDLGNYR 1274
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: F0YFC0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFC0_AURAN) HSP 1 Score: 344 bits (883), Expect = 6.520e-106 Identity = 167/266 (62.78%), Postives = 217/266 (81.58%), Query Frame = 3
Query: 3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
M Q EAA+++EL ++AAAIY+ + +AA +M +V LPKL QYAKACE G+ +A++A+E A DMDSVVRL L L++P++AF I+R+T SS GA++V+R+CQ GD++GAIEFLL+A R+ +AF+L+K H QMDV+T VLG ++PDDALS+A+ YE HELG AG+FY+LCGQ+ RALKLF+QCG++EV AI +VGKAR+D LTHTLIDFLMGE DGVPKDPNYIYRLY+ALGN+ QAAKTA+IIA+QEQDLG+YK
Sbjct: 904 MNQHSEAASLFELAEHFEKAAAIYIRKLNFTQAAAIMHKVALPKLHAQYAKACEAAGKLGDAVKAYEVAHDMDSVVRLYLGNLNQPERAFEIVRKTESSDGAQLVARFCQQQGDFRGAIEFLLMAKRSDEAFNLSKLHSQMDVYTAVLGDAIAPDDALSVAQHYEAVHELGLAGQFYALCGQYPRALKLFIQCGEKEVHRAIEIVGKARSDSLTHTLIDFLMGEPDGVPKDPNYIYRLYLALGNFPQAAKTAVIIARQEQDLGSYK 1169
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S2W386_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W386_9STRA) HSP 1 Score: 341 bits (874), Expect = 7.590e-105 Identity = 165/266 (62.03%), Postives = 220/266 (82.71%), Query Frame = 3
Query: 3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
MKQ EAA +YE+G Q DRAAAIY+ K+L++A+ ++ +V+ KLL +YAK CE G+ EEA++A+ER RDMDSVVRLCL QL +P++AF I+R+T SS+GA+ V++YC+ G+++GAIEFLL+A +AF LAK+H M+V+T +L + PD+A ++A +YEGQH+LGKAG FYSLCGQ+ RAL+LFLQCG+++V+ AI VVGKA+NDMLTHTLIDFLMGE+DGVPK+P +I RLY+ALGNY QAA+TA+IIA+QEQD GNYK
Sbjct: 832 MKQNSEAAELYEMGQQWDRAAAIYIGSKNLSQASAIIDKVSQTKLLTEYAKRCEKEGQLEEAVKAYERGRDMDSVVRLCLDQLKRPERAFDIVRKTSSSTGAQHVAQYCRAEGNYRGAIEFLLMAKCYDEAFDLAKAHDCMEVYTTILDDGIGPDEANAVAVYYEGQHDLGKAGHFYSLCGQYARALRLFLQCGEKQVDRAIDVVGKAQNDMLTHTLIDFLMGESDGVPKEPVHINRLYLALGNYEQAARTAVIIARQEQDAGNYK 1097
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S4A1K5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A1K5_9STRA) HSP 1 Score: 333 bits (855), Expect = 4.630e-102 Identity = 164/265 (61.89%), Postives = 211/265 (79.62%), Query Frame = 3
Query: 3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNY 797
M Q EAA +YE ++AAAIY+ D ++ A VMP+VTLPKL QYAKACE + R++EA++A+E A D+DSVVRL L+QL+ P++ F I+R T SS GA +V+++CQD GD+KGAIEFLL+A T +AF LAK H Q++ +T+VLG + DDAL++A+ YE +E G AG++Y+LC + RALKLF++CG++EV AAI +VGKARND LTHTLIDFLMGE DGVPKDPNYIYRLY+ALGNY QAAKTA+IIAKQEQ+LGNY
Sbjct: 902 MNQHSEAAGLYEDAEHWEKAAAIYIKKLDFSRCASVMPKVTLPKLHAQYAKACEASERFQEAVQAYENAHDLDSVVRLHLNQLNTPERGFDIVRRTQSSDGARLVAKFCQDHGDFKGAIEFLLMAKGTEEAFELAKLHNQVEKYTEVLGDSIRADDALNVAQHYEKINEPGLAGKYYALCNDYGRALKLFIKCGEKEVHAAIDIVGKARNDALTHTLIDFLMGEPDGVPKDPNYIYRLYIALGNYPQAAKTAVIIAKQEQELGNY 1166
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S2AWF5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWF5_9STRA) HSP 1 Score: 310 bits (795), Expect = 2.250e-100 Identity = 151/245 (61.63%), Postives = 192/245 (78.37%), Query Frame = 3
Query: 63 AAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNY 797
AAIY+ L A +M +VT PKL +YAK CE +E+A ++ E RDMD+VVRLCL LD+P++A I+R T SS+GA++V+ YCQ +++GAIEFLL+A + +AFSLA+ H MDV+T VLG + PDDA + +YE +H++GKAG FY+LCGQH +ALKLFLQCG +EVE AI VVGKARNDMLTHTLIDFLMGETDGVPK+P ++YRLY+ALGNY+QAAKTA+IIA+QEQD GNY
Sbjct: 1 AAIYIKAPTLTHATRIMSKVTQPKLHIEYAKRCEKENLYEDAAKSFELGRDMDNVVRLCLDHLDQPERASEIVRATSSSTGAQLVALYCQRERNYRGAIEFLLLAQCSEEAFSLARDHDCMDVYTTVLGETMGPDDAANTGSYYEAKHDMGKAGHFYALCGQHAKALKLFLQCGDKEVERAIEVVGKARNDMLTHTLIDFLMGETDGVPKEPFHVYRLYLALGNYAQAAKTALIIARQEQDGGNY 245
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S3JVG1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVG1_9STRA) HSP 1 Score: 325 bits (833), Expect = 2.830e-99 Identity = 156/266 (58.65%), Postives = 208/266 (78.20%), Query Frame = 3
Query: 3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
M Q EAA MYE G ++AAAIY+ + AA +M +V LPKL QYAKACE ++ +A A+E A DMDSVVRL LHQL+KP+KA I+R T SS GA++V+R+CQ GD++GAIEFLL+A R+ +AF L+K+HG M+++T VLG +SPDDAL++A+ +E HE AG+FY++CGQ+ +ALKL++ CG+ ++ AI +VGKA +D LTH LIDFLMGE DG+PKDPNYIYRLY+ALGN++QAA+TA+IIA+QEQ+LGNYK
Sbjct: 707 MSQHVEAAAMYEAGEYFEKAAAIYIEQHNFTAAAAIMHKVNLPKLHLQYAKACESAEKFLQAAAAYESAGDMDSVVRLYLHQLEKPEKALEIVRRTHSSGGAQLVARFCQQEGDFRGAIEFLLMAQRSEEAFELSKAHGHMELYTSVLGDRMSPDDALNVAKHFESIHESALAGKFYAVCGQYAKALKLYMHCGESQLNNAIEIVGKAHSDSLTHKLIDFLMGEPDGIPKDPNYIYRLYIALGNFTQAARTAVIIARQEQELGNYK 972
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A397DZW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DZW7_9STRA) HSP 1 Score: 305 bits (782), Expect = 5.460e-94 Identity = 151/267 (56.55%), Postives = 203/267 (76.03%), Query Frame = 3
Query: 3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYKV 803
MKQ +AA +YE G ++AA IY+ K L+KAA +M +V +PK+ Q+AKA E G + A +A+E A D+DSVVR+ L L+ +KAF+I+++T SS GA V++YC ++ ++ AI+FLL+A+R DAF LA++H ++D FTK +G +S + AL IA+ YE +AG FY +CG H+AL+LFLQCG+ E+ AI VVGKARNDMLTHTLID+LMG+TDG+PKDPNYI+RLYMALGNY+QAAKTAIIIA+QEQ+LGNYKV
Sbjct: 419 MKQLSDAAQLYERGEVYEKAAQIYIQMKQLHKAAPLMAKVHMPKVHMQFAKAKEAAGEFAAASDAYEAAMDLDSVVRIQLEHLNNAEKAFSIVKQTKSSEGASAVAKYCVESANYAAAIDFLLMANREDDAFQLAQTHNEIDAFTKTIGDGISVERALKIAQHYEQTQAHARAGEFYQVCGNFHKALRLFLQCGETELGRAIDVVGKARNDMLTHTLIDYLMGDTDGIPKDPNYIFRLYMALGNYAQAAKTAIIIARQEQELGNYKV 685 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2708.7412.1 >prot_H-paniculata_contig2708.7412.1 ID=prot_H-paniculata_contig2708.7412.1|Name=mRNA_H-paniculata_contig2708.7412.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=267bp MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAback to top mRNA from alignment at H-paniculata_contig2708:14568..19956+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2708.7412.1 ID=mRNA_H-paniculata_contig2708.7412.1|Name=mRNA_H-paniculata_contig2708.7412.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5389bp|location=Sequence derived from alignment at H-paniculata_contig2708:14568..19956+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2708:14568..19956+ >mRNA_H-paniculata_contig2708.7412.1 ID=mRNA_H-paniculata_contig2708.7412.1|Name=mRNA_H-paniculata_contig2708.7412.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1602bp|location=Sequence derived from alignment at H-paniculata_contig2708:14568..19956+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |