mRNA_H-paniculata_contig2708.7412.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig2708.7412.1
Unique NamemRNA_H-paniculata_contig2708.7412.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: D7FIK0_ECTSI (WD repeat membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIK0_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 1.760e-154
Identity = 235/267 (88.01%), Postives = 253/267 (94.76%), Query Frame = 3
Query:    3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYKV 803
            MKQP EAA MYELGGQ+ RAAAIYVA KDL+KAA VMPRVT PKLLGQYAKACEITGRWE+ALEA+ERARDMDSVVRLCL QLD+  +AFAI+RE  SS+GAEMVSR+CQDAGDW+GAIEFLL+A RTADAFSLAKSH +MD+FTKVLG +VSPDDALS+ARFYEG+HELGKAG+FYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALG+YSQAAKTAIIIAKQEQDLGNYKV
Sbjct:  958 MKQPAEAAAMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPKLLGQYAKACEITGRWEQALEAYERARDMDSVVRLCLDQLDQSHRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFSLAKSHARMDIFTKVLGTDVSPDDALSVARFYEGKHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKV 1224          
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A6H5KE11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE11_9PHAE)

HSP 1 Score: 439 bits (1129), Expect = 5.460e-145
Identity = 233/340 (68.53%), Postives = 252/340 (74.12%), Query Frame = 3
Query:    3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRW-------------------------------------------------------------------------EEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYKV 803
            MKQP EAA MYELGGQ+ RAAAIYVA KDL+KAA VMPRVT PKLLGQYAKACEITGR                                                                          E+ALEA+ERARDMDSVVRLCL QLD+  +AFAI+RE  SS+GAEMVSR+CQDAGDW+GAIEFLL+A RTADAF+LAKSH +MD+FTKVLG +VSPDDALS+ARFYEG+HELGKAG+FYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALG+YSQAAKTAIIIAKQEQDLGNYKV
Sbjct:  264 MKQPAEAAAMYELGGQDHRAAAIYVAAKDLDKAATVMPRVTQPKLLGQYAKACEITGRCGGCRKRSSGQARRSVASPLATGTMFCEGESTSEDMKSDVSLSKPPTSASQKGRERLAINLAPCFDPGLVNIRLEQALEAYERARDMDSVVRLCLDQLDQSHRAFAIVRENASSTGAEMVSRHCQDAGDWEGAIEFLLMAKRTADAFNLAKSHARMDIFTKVLGTDVSPDDALSVARFYEGKHELGKAGKFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGSYSQAAKTAIIIAKQEQDLGNYKV 603          
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S2CHE3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHE3_9STRA)

HSP 1 Score: 360 bits (924), Expect = 1.310e-118
Identity = 176/266 (66.17%), Postives = 223/266 (83.83%), Query Frame = 3
Query:    3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
            MKQ  +AA +YELG Q +RAAAI++  K+L +AA +MP+VT PKL  +YA  CE  G++EEA+ ++E ARDMD+VVRLCL QL  P++AF I+R T SS+GA++V+ YCQ  G+++GAIEFLL+A  + +AF+LAK+H  MDV+TKVLG  + P++A S+A FYEGQHELG+AG FYSLCGQ+ RALKLFLQCG++EV+ AI VVGKARNDMLTHTLIDFLMGETDGVPK+P +IYRLY+ALGNY+QAAKTAIIIA+QEQDLG Y+
Sbjct:   60 MKQSADAAVLYELGEQYERAAAIFIKTKNLVQAARIMPKVTQPKLHSEYALKCEKDGQFEEAVRSYEAARDMDAVVRLCLDQLSTPERAFEIVRATSSSTGAQLVAHYCQREGNFRGAIEFLLMAKCSEEAFALAKTHDCMDVYTKVLGDGIGPEEAQSVASFYEGQHELGQAGHFYSLCGQYARALKLFLQCGEKEVDRAIEVVGKARNDMLTHTLIDFLMGETDGVPKEPFHIYRLYLALGNYAQAAKTAIIIARQEQDLGKYR 325          
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A835ZAW6_9STRA (WD repeat membrane protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAW6_9STRA)

HSP 1 Score: 363 bits (932), Expect = 2.560e-112
Identity = 181/279 (64.87%), Postives = 216/279 (77.42%), Query Frame = 3
Query:    3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLG-------------AEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
            M+QP EAA ++E  G  +RA AIY+A +++ +AA V P+VTLPKLLGQYA+ACE  G+W+ A  AHERARDMD+VVRLCL QLD+P++AFAI+R T S++GAE VSRYC  AGDW GAIEFLL+A R  +AF LA++HGQM  F                    + P DAL +AR+YE Q ELG AGR Y+ CGQHHRALKL LQ G+ EV AAI VVG+ARNDMLTHTLID+LMGETDGVPKDPN+IYRLY+ALGNY QAAKTAIIIA+QEQDLGNY+
Sbjct:  996 MRQPAEAAALWEASGHFERALAIYLAARNMPQAASVAPKVTLPKLLGQYARACEAAGQWDAAAAAHERARDMDAVVRLCLDQLDQPERAFAIVRATASAAGAETVSRYCAAAGDWGGAIEFLLMAQRADEAFELARAHGQMAAFVGARARGXXXXXXXXXXXGALPPADALRVARYYEAQGELGAAGRHYAACGQHHRALKLLLQRGEAEVAAAIDVVGRARNDMLTHTLIDYLMGETDGVPKDPNHIYRLYLALGNYQQAAKTAIIIARQEQDLGNYR 1274          
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: F0YFC0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YFC0_AURAN)

HSP 1 Score: 344 bits (883), Expect = 6.520e-106
Identity = 167/266 (62.78%), Postives = 217/266 (81.58%), Query Frame = 3
Query:    3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
            M Q  EAA+++EL    ++AAAIY+   +  +AA +M +V LPKL  QYAKACE  G+  +A++A+E A DMDSVVRL L  L++P++AF I+R+T SS GA++V+R+CQ  GD++GAIEFLL+A R+ +AF+L+K H QMDV+T VLG  ++PDDALS+A+ YE  HELG AG+FY+LCGQ+ RALKLF+QCG++EV  AI +VGKAR+D LTHTLIDFLMGE DGVPKDPNYIYRLY+ALGN+ QAAKTA+IIA+QEQDLG+YK
Sbjct:  904 MNQHSEAASLFELAEHFEKAAAIYIRKLNFTQAAAIMHKVALPKLHAQYAKACEAAGKLGDAVKAYEVAHDMDSVVRLYLGNLNQPERAFEIVRKTESSDGAQLVARFCQQQGDFRGAIEFLLMAKRSDEAFNLSKLHSQMDVYTAVLGDAIAPDDALSVAQHYEAVHELGLAGQFYALCGQYPRALKLFIQCGEKEVHRAIEIVGKARSDSLTHTLIDFLMGEPDGVPKDPNYIYRLYLALGNFPQAAKTAVIIARQEQDLGSYK 1169          
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S2W386_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W386_9STRA)

HSP 1 Score: 341 bits (874), Expect = 7.590e-105
Identity = 165/266 (62.03%), Postives = 220/266 (82.71%), Query Frame = 3
Query:    3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
            MKQ  EAA +YE+G Q DRAAAIY+  K+L++A+ ++ +V+  KLL +YAK CE  G+ EEA++A+ER RDMDSVVRLCL QL +P++AF I+R+T SS+GA+ V++YC+  G+++GAIEFLL+A    +AF LAK+H  M+V+T +L   + PD+A ++A +YEGQH+LGKAG FYSLCGQ+ RAL+LFLQCG+++V+ AI VVGKA+NDMLTHTLIDFLMGE+DGVPK+P +I RLY+ALGNY QAA+TA+IIA+QEQD GNYK
Sbjct:  832 MKQNSEAAELYEMGQQWDRAAAIYIGSKNLSQASAIIDKVSQTKLLTEYAKRCEKEGQLEEAVKAYERGRDMDSVVRLCLDQLKRPERAFDIVRKTSSSTGAQHVAQYCRAEGNYRGAIEFLLMAKCYDEAFDLAKAHDCMEVYTTILDDGIGPDEANAVAVYYEGQHDLGKAGHFYSLCGQYARALRLFLQCGEKQVDRAIDVVGKAQNDMLTHTLIDFLMGESDGVPKEPVHINRLYLALGNYEQAARTAVIIARQEQDAGNYK 1097          
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S4A1K5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A1K5_9STRA)

HSP 1 Score: 333 bits (855), Expect = 4.630e-102
Identity = 164/265 (61.89%), Postives = 211/265 (79.62%), Query Frame = 3
Query:    3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNY 797
            M Q  EAA +YE     ++AAAIY+   D ++ A VMP+VTLPKL  QYAKACE + R++EA++A+E A D+DSVVRL L+QL+ P++ F I+R T SS GA +V+++CQD GD+KGAIEFLL+A  T +AF LAK H Q++ +T+VLG  +  DDAL++A+ YE  +E G AG++Y+LC  + RALKLF++CG++EV AAI +VGKARND LTHTLIDFLMGE DGVPKDPNYIYRLY+ALGNY QAAKTA+IIAKQEQ+LGNY
Sbjct:  902 MNQHSEAAGLYEDAEHWEKAAAIYIKKLDFSRCASVMPKVTLPKLHAQYAKACEASERFQEAVQAYENAHDLDSVVRLHLNQLNTPERGFDIVRRTQSSDGARLVAKFCQDHGDFKGAIEFLLMAKGTEEAFELAKLHNQVEKYTEVLGDSIRADDALNVAQHYEKINEPGLAGKYYALCNDYGRALKLFIKCGEKEVHAAIDIVGKARNDALTHTLIDFLMGEPDGVPKDPNYIYRLYIALGNYPQAAKTAVIIAKQEQELGNY 1166          
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S2AWF5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWF5_9STRA)

HSP 1 Score: 310 bits (795), Expect = 2.250e-100
Identity = 151/245 (61.63%), Postives = 192/245 (78.37%), Query Frame = 3
Query:   63 AAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNY 797
            AAIY+    L  A  +M +VT PKL  +YAK CE    +E+A ++ E  RDMD+VVRLCL  LD+P++A  I+R T SS+GA++V+ YCQ   +++GAIEFLL+A  + +AFSLA+ H  MDV+T VLG  + PDDA +   +YE +H++GKAG FY+LCGQH +ALKLFLQCG +EVE AI VVGKARNDMLTHTLIDFLMGETDGVPK+P ++YRLY+ALGNY+QAAKTA+IIA+QEQD GNY
Sbjct:    1 AAIYIKAPTLTHATRIMSKVTQPKLHIEYAKRCEKENLYEDAAKSFELGRDMDNVVRLCLDHLDQPERASEIVRATSSSTGAQLVALYCQRERNYRGAIEFLLLAQCSEEAFSLARDHDCMDVYTTVLGETMGPDDAANTGSYYEAKHDMGKAGHFYALCGQHAKALKLFLQCGDKEVERAIEVVGKARNDMLTHTLIDFLMGETDGVPKEPFHVYRLYLALGNYAQAAKTALIIARQEQDGGNY 245          
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A7S3JVG1_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JVG1_9STRA)

HSP 1 Score: 325 bits (833), Expect = 2.830e-99
Identity = 156/266 (58.65%), Postives = 208/266 (78.20%), Query Frame = 3
Query:    3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYK 800
            M Q  EAA MYE G   ++AAAIY+   +   AA +M +V LPKL  QYAKACE   ++ +A  A+E A DMDSVVRL LHQL+KP+KA  I+R T SS GA++V+R+CQ  GD++GAIEFLL+A R+ +AF L+K+HG M+++T VLG  +SPDDAL++A+ +E  HE   AG+FY++CGQ+ +ALKL++ CG+ ++  AI +VGKA +D LTH LIDFLMGE DG+PKDPNYIYRLY+ALGN++QAA+TA+IIA+QEQ+LGNYK
Sbjct:  707 MSQHVEAAAMYEAGEYFEKAAAIYIEQHNFTAAAAIMHKVNLPKLHLQYAKACESAEKFLQAAAAYESAGDMDSVVRLYLHQLEKPEKALEIVRRTHSSGGAQLVARFCQQEGDFRGAIEFLLMAQRSEEAFELSKAHGHMELYTSVLGDRMSPDDALNVAKHFESIHESALAGKFYAVCGQYAKALKLYMHCGESQLNNAIEIVGKAHSDSLTHKLIDFLMGEPDGIPKDPNYIYRLYIALGNFTQAARTAVIIARQEQELGNYK 972          
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Match: A0A397DZW7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DZW7_9STRA)

HSP 1 Score: 305 bits (782), Expect = 5.460e-94
Identity = 151/267 (56.55%), Postives = 203/267 (76.03%), Query Frame = 3
Query:    3 MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYAKACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSSGAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGAEVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEAAIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAKTAIIIAKQEQDLGNYKV 803
            MKQ  +AA +YE G   ++AA IY+  K L+KAA +M +V +PK+  Q+AKA E  G +  A +A+E A D+DSVVR+ L  L+  +KAF+I+++T SS GA  V++YC ++ ++  AI+FLL+A+R  DAF LA++H ++D FTK +G  +S + AL IA+ YE      +AG FY +CG  H+AL+LFLQCG+ E+  AI VVGKARNDMLTHTLID+LMG+TDG+PKDPNYI+RLYMALGNY+QAAKTAIIIA+QEQ+LGNYKV
Sbjct:  419 MKQLSDAAQLYERGEVYEKAAQIYIQMKQLHKAAPLMAKVHMPKVHMQFAKAKEAAGEFAAASDAYEAAMDLDSVVRIQLEHLNNAEKAFSIVKQTKSSEGASAVAKYCVESANYAAAIDFLLMANREDDAFQLAQTHNEIDAFTKTIGDGISVERALKIAQHYEQTQAHARAGEFYQVCGNFHKALRLFLQCGETELGRAIDVVGKARNDMLTHTLIDYLMGDTDGIPKDPNYIFRLYMALGNYAQAAKTAIIIARQEQELGNYKV 685          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2708.7412.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIK0_ECTSI1.760e-15488.01WD repeat membrane protein n=1 Tax=Ectocarpus sili... [more]
A0A6H5KE11_9PHAE5.460e-14568.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2CHE3_9STRA1.310e-11866.17Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835ZAW6_9STRA2.560e-11264.87WD repeat membrane protein n=1 Tax=Tribonema minus... [more]
F0YFC0_AURAN6.520e-10662.78Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S2W386_9STRA7.590e-10562.03Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S4A1K5_9STRA4.630e-10261.89Hypothetical protein (Fragment) n=2 Tax=Pelagomona... [more]
A0A7S2AWF5_9STRA2.250e-10061.63Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3JVG1_9STRA2.830e-9958.65Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A397DZW7_9STRA5.460e-9456.55Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2708contigH-paniculata_contig2708:14568..19956 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score478.8
Seed ortholog evalue1.7e-132
Seed eggNOG ortholog2880.D7FIK0
Preferred nameFAP66
KEGG koko:K19671
Hectar predicted targeting categoryother localisation
EggNOG free text desc.myotome development
EggNOG OGsKOG2247@1,KOG2247@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Exons6
Model size803
Cds size801
Stop0
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929815.0426705-UTR-H-paniculata_contig2708:14567..145691622929815.0426705-UTR-H-paniculata_contig2708:14567..14569Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2708 14568..14569 +
1691481023.4278352-UTR-H-paniculata_contig2708:14567..145691691481023.4278352-UTR-H-paniculata_contig2708:14567..14569Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig2708 14568..14569 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929815.056617-CDS-H-paniculata_contig2708:14569..147421622929815.056617-CDS-H-paniculata_contig2708:14569..14742Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 14570..14742 +
1691481023.438484-CDS-H-paniculata_contig2708:14569..147421691481023.438484-CDS-H-paniculata_contig2708:14569..14742Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 14570..14742 +
1622929815.0710554-CDS-H-paniculata_contig2708:15178..153011622929815.0710554-CDS-H-paniculata_contig2708:15178..15301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 15179..15301 +
1691481023.4501624-CDS-H-paniculata_contig2708:15178..153011691481023.4501624-CDS-H-paniculata_contig2708:15178..15301Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 15179..15301 +
1622929815.0870197-CDS-H-paniculata_contig2708:16079..162211622929815.0870197-CDS-H-paniculata_contig2708:16079..16221Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 16080..16221 +
1691481023.4664488-CDS-H-paniculata_contig2708:16079..162211691481023.4664488-CDS-H-paniculata_contig2708:16079..16221Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 16080..16221 +
1622929815.1012545-CDS-H-paniculata_contig2708:16955..170501622929815.1012545-CDS-H-paniculata_contig2708:16955..17050Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 16956..17050 +
1691481023.4769478-CDS-H-paniculata_contig2708:16955..170501691481023.4769478-CDS-H-paniculata_contig2708:16955..17050Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 16956..17050 +
1622929815.116621-CDS-H-paniculata_contig2708:17573..177811622929815.116621-CDS-H-paniculata_contig2708:17573..17781Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 17574..17781 +
1691481023.4864268-CDS-H-paniculata_contig2708:17573..177811691481023.4864268-CDS-H-paniculata_contig2708:17573..17781Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 17574..17781 +
1622929815.1316044-CDS-H-paniculata_contig2708:19896..199561622929815.1316044-CDS-H-paniculata_contig2708:19896..19956Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 19897..19956 +
1691481023.4958906-CDS-H-paniculata_contig2708:19896..199561691481023.4958906-CDS-H-paniculata_contig2708:19896..19956Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig2708 19897..19956 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2708.7412.1prot_H-paniculata_contig2708.7412.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig2708 14570..19956 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig2708.7412.1

>prot_H-paniculata_contig2708.7412.1 ID=prot_H-paniculata_contig2708.7412.1|Name=mRNA_H-paniculata_contig2708.7412.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=267bp
MKQPGEAATMYELGGQEDRAAAIYVAGKDLNKAALVMPRVTLPKLLGQYA
KACEITGRWEEALEAHERARDMDSVVRLCLHQLDKPDKAFAIIRETVSSS
GAEMVSRYCQDAGDWKGAIEFLLIAHRTADAFSLAKSHGQMDVFTKVLGA
EVSPDDALSIARFYEGQHELGKAGRFYSLCGQHHRALKLFLQCGKQEVEA
AIAVVGKARNDMLTHTLIDFLMGETDGVPKDPNYIYRLYMALGNYSQAAK
TAIIIAKQEQDLGNYKV
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mRNA from alignment at H-paniculata_contig2708:14568..19956+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig2708.7412.1 ID=mRNA_H-paniculata_contig2708.7412.1|Name=mRNA_H-paniculata_contig2708.7412.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5389bp|location=Sequence derived from alignment at H-paniculata_contig2708:14568..19956+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTATGAAGCAGCCCGGCGAGGCCGCGACCATGTACGAACTAGGCGGTCAG GAGGACCGAGCTGCCGCGATCTACGTAGCCGGAAAGGATCTAAATAAAGC GGCCTTGGTCATGCCACGAGTCACACTGCCGAAGCTTCTGGGGCAGTACG CAAAAGCTTGCGAAATTACGGGAAGGTATGAAGGCGGTGCGGCATCGGCG AGACATGGTTGCTGCCGCCCCCCGCCCCCCCGCCTCCCCCCTCACTCGTT TAACTATGCGTGCACGTCAAATCGTTCGGCCGCCTAGGTTTGCGAAATTC AAACCTTTTGCTCGTCGCCGAGTGCAGATTGTGTCACCATCCCTACTTTG CTCGTTCACTTGAATAACTTGCCGAACATTCTATCATAGAGTATTCAACG CGCCCGAGCTAGACGTCGCCGATCCCCGGCAGACCACGCAGACTTGCGTA TGAACTCGATTTACCGGTAGTATATATCGGACAGAGGTGAACGTTTCGCG TCAAACCCGTAGACTGCGATAAAAAGTGATCAGCACAGGCTAAGGTCTTC CAATATGGTAGCACAAAACTTCGTGGAACATTGCCATTGCCCCTGCTATC CTGTCTGCCAGATGGGAAGAGGCGCTTGAGGCCCACGAGAGGGCACGGGA CATGGACTCCGTTGTTCGACTGTGTCTTCATCAGCTGGACAAACCAGACA AGGCTTTCGCTATCATTCGTGAAACGGTTTCCAGGTACGTCTTAGCGAGT TTCTGACCTAACTAAGCGATCGGGAGTGTACTAGCTTTCTAACGTACCTC CTCACGAGCGTGTCCCTACCTCGCGGTGATAAACGGCCATTTCAGGAGGT CAAAGGCCTATCCGGAATGCACTTACTCAACGAACGATCGTTGCGAGTAG GTCACCAGCCCCTGATCCCTTTCGGACAACAGCCCATATCAAAGGCTGCA CTCTTAAAAGACGACTGTATGCCAACTCTTTAGATTCACGCAAGGAGTTA TCATGACACTGGGATAGATCAGGGTGAACTTCAGAATTGTTCCTTCGCTT TGCCACATAGGGCACCTGCGAGAGTAATTTCCGTAAGAATGGGAGCGATG GCCTTGGGTTATGTAGAATCTAGCCATCTCGAGCATGCCCTTGGCAGTTT CTCCTGCACACGTTATGCTTGCTATTCCTGAGTATCTGTCGTTGTTCCGC ATGTGGCCAGCAATCTCCAACTTACACACTATGTTCTCCCGACGAAGAGA ATTTATCAACAGAACTATGGCTGCTCGTTTCTGAAGGGCTCATCTGTCGA TGTTCTCGACATATATTGTACCTTTCCGAGAACTCGGTGTACTTTTGTTA ACATTCTTAGCCTACGATCAACGTCTGGGGTAGTGGCAAAATTTTGAACG TTGAGAAAACATCGAACATGACGGTGAACAAATCTAATGCCGCGTTATGT CTACAAAAAACAATATTGAGGGAAAATGGCGTATTACGTTTTCCCTTCGG TTCTATTGGCAGCTCTGGCGCGGAGATGGTTTCCCGATACTGCCAGGACG CTGGAGATTGGAAAGGAGCGATTGAGTTTTTGCTTATTGCCCATAGAACG GCGGATGCCTTCAGTCTTGCCAAATCCCACGGGCAGATGGACGTCTTCAC CAAGGTGTGAAGTAACGCACAGTGCCTGGCATGTGGCACGTTTGACTCAC ACCCATCAAACACTGTATAACAGGAATCACAAAGCAAAAAAACTAGACGT GCCTGTATGACATGTTTGGTTGGAGGGCTCGGGGCAGCAACACTGGTGCG AAAGGACGGCGTACTTTCTCCCGGTATCGAAGTAGACCTGGGCATACACC CCCTCAACCTCCGCACTAGAATATAGAATCGTCTCATTGTTTTTACAAAA GCTTCCCACGGGTACTTGGTTCAATCCACAAAGTATATGCAGTACCAGCA AACGGCTATTGTCCCATTTCTATGACCTTAAACTTGCCACGAAGAATATC ATTTGGTAAATTTAGAAGTGACTCAATGAAGCGAACTCAACGCCTTGTAA ACACAGGCTCCTCGCTGAGGTTGGAAAGTTAGCCCGAGAAGTCTTAGCTT CCATCCCTCTACCCAAGCTACCGAGTTCGTACGCTTTCTGAGTCGGTGTG TATGTCACTTCTCAACGGGTGACATACGAGTTACGACAGCCCACACGCTG ATTGTTGACTAGCCAGCCTGGGCTAAGCCCGACGCAGACCTCTTGCAGAC CCTGCGGCTGTTGTCACGCTGTCCAACCAATCAGGTTGTTCTCTCACGAC TATTGGTTTGATACCAGGCTCAGGATCCAAGTCGCGGTTGCGAAACTCTC ATCTTGTAAATCTGATGCTAACCGTGGGCGCTCGGTAGGTACTCGGAGCG GAGGTATCCCCTGACGACGCGCTGAGTATTGCTCGGTTCTACGAGGGGCA GCACGAGCTCGGGAAGGCGGGTAGATTCTATAGGTGAAAAGCGAAAGATA CAAAATGGATAGCCGATGACTTGAGTGTGTCCTGTGCGTTCACGCTGTGT TGATAAACGCTCTGTTTGATACCGCACAGAAGAGTCACTAGTACCCCACC TCCGTCATGTTGACATGGATCAGTCATATTTCCCTTGGTGTACGCACGTG CATGTACTTCAATGCGCCACCCCAGGGCTGTGATACGAACTACACATTTG ATGTGTATCACTAGCACCTTGAGTACGCCTCCCCCCTGTCCCTCTCGTCT TATCTATGCGTGGTTTAGATTGTCTAGAGCTAATTCATTCCACCATTATT CACAGTTTTCCTTGTAGTGGGATTGTGGTGGGAAAAGGCGATATCGACAG TCCAAAGCGGTTGAATGGGGATCAAACACAAACAAGAGTAGCCCCTGCTA TAGTATTGCGGCGTCCCTAGAGAGACAAGCTTCACAACACGAACTCGCTC TCACTTTCCCCCCGCTTCCCCTGACTCCTTAACGCCATCGCCCTTGGCAC AATCAGTTTATGCGGTCAACACCACCGTGCTTTGAAGCTGTTTTTGCAAT GCGGAAAGCAAGAGGTGGAGGCTGCGATAGCCGTAGTAGGGAAGGCGCGC AACGACATGCTCACGCATACTTTAATTGATTTTTTGATGGGCGAAACGGA CGGTGTGCCGAAAGACCCCAACTACATATACCGGCTCTATATGGCGCTTG GGAACTACTCCCAGGTACGGACTCAAGATTAAGTTGTAAACCAATATGTC ACGCTCCCATGGAAGGAGTTAACCCTTGTTTTGCGCGCAGCAATCGCGTA ACAACGACTCTAAATCACTTTGCCCAATAGACTGGATTACCCATTACACC ACTCAGTCAGCTTCTACTAGACAAAAGAAAATCGAAATCGTTGGGTTCGC GAACCGGTACTTTCTCTAGGAGGAGCACACTCCCCTCGCCACGCGCTACT GACGGGGTTCAAGGCCTATCCCCATCTATCGTTTTCTGTGAAATAATTCA TTTTCAATAGGAATCGAAGCCATGATTTTGTTTTGTTCGATAGCGTGGAT TGCCCACTAGACAACTGAGTCATGTTTGCAACAATCTGCTCAAGTCCAAT CATGAAGTCTTCAAGGTCACTGGCTGCCTTGTACTCTGCGTTTACAACCT GCTGGTAAAGTTCTGCTCCTGCTCTTATTGTGCTAGGGGAAGGGTGCTCA TGTTAGGCAGACCATGCTTCCGAGGGTGACGCTGATCTGAACACTATCTG CTGACTGATTGCGTCACCCGTTGCATCATGTAGTAAGCGAAAGGCCATTT TCACCACCTGCAACTCTCCTCGAGAGTTCTAGCTGCGTGAAGCTCTGCAT CAGTCAGCATAGGGTAGATGTCTTGCTTTAGAGTGCTGGATAGAACCCGA GTATTCCAGCATGCGCCTCTACAGTCTGCTTGAACAAGTCCCAGCTTTCT GGTTTCCTGTCGAGTTGAATACCTTTCGCGTCTAATTTTAACGATGCAGA ACAACATATATCCAACCCCGGTCCCATCATTCCATAAAAACACTCATCTC TACATGTACCACGGCCGAATTCCCTGTTAAACCTGTTATTCATAGTATAG CGCAGATCACCAGGGTCTGTTGTACCAGGGTGTACTCACTATGAGCGCTT TCGCGCATAGCCGCTACTCCCATTCCCGAGTTACCAAGCCTATCGCTCAA CCCCCCGCCGAGTCTCACAGGGTCCCTCCTTTGGGCACCTGTCACGTAGA ATCTGAAATTGGCTCCCAGCCCTCTCGGTATCCCATTCATTTGCGTTGCT GTTGGGTCTACAGAAAAACCCTCCGCGGTTACTCCACGAGCACCGCTATC TCCAGCTTCTCTTGACTTCCGAACCGCGTCTTCATCCTTGTCCCAAGGTT CACGATTTGATTTGATACTCAATTTCTTCAAGCCCTCCTTCAAAGAGTTC GTCATGGAAATCAGTTTGTCGGATGCCTGCCTCCTTTTGTCTCGAATATT GTTCTTGCACCGTAGTCTCAAGTTTCCGGAACTCTTCCCAGTAACAGTTA TGACACTGGTTCTACCGATAAACACTCGCTTTTTTATTAGACTAAATCAG AGATTGCTCGTAGTTGTCCCACAACCACGCAGGTTACAAGTTCTTCAAGA CATAAGAATGTTCGTACTAGAAACCACACTAAACCCTTGGCACGGCGCAA CCAGAGAGTGAGCAACGATACACATAAGCACATTGACCACAAACGAATCT TCCATAATCCTGCACACTGGTGGACCACCCCATAAAAACTTCCCAGAACC TTTTAGCAAGACCTTCTAGGATCCTTGCCAACAACCCGGATCTACTTTCC GAATAACCACTACATCTCGATGACCCACCGTGTCTCCGAACACACTCTTA GTAAAGGATCGAATTGCGAACCGAATGATGGAAATACGAACTTCCAATAG CTACAATTACAACCGCGGACTGCAAGGAGGAGCACAATTTACCCAGGCTT TTGTCCTTCACTCTCGGGCCTTCCGCCACTCTACAGAAATGTTGCGTGCA AAGAAAAGCCATTTTTCGGTCAGATTCCAACACATATTACAGTAGCGTAC GCATGACGGAGACTGGCGTATTCTGCGGATATTGTTTTGTTAAAATTGGT TTTGGTCGCGTACTTCCTGGAGATTCTACGCTCGCTCTGATGTATTCCAT CTTTGACAATGTACACGTTTTAGTTACGCGGTATTGGCGTTGTTCATTAC CTGGTATTTGGGCGGGCGTTGTCCACCTCTTAGATACGCCCACGTTACTT ACGACTCCAAACACTTTCGAAATATGTAGGCGGCAAAGACGGCCATCATA ATCGCTAAACAGGAGCAAGACTTGGGAAACTACAAGGTG
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Coding sequence (CDS) from alignment at H-paniculata_contig2708:14568..19956+

>mRNA_H-paniculata_contig2708.7412.1 ID=mRNA_H-paniculata_contig2708.7412.1|Name=mRNA_H-paniculata_contig2708.7412.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1602bp|location=Sequence derived from alignment at H-paniculata_contig2708:14568..19956+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCAGCCCGGCGAGGCCGCGACCATGTACGAACTAGGCGGTCAGGA
GGACCGAGCTGCCGCGATCTACGTAGCCGGAAAGGATCTAAATAAAGCGG
CCTTGGTCATGCCACGAGTCACACTGCCGAAGCTTCTGGGGCAGTACGCA
AAAGCTTGCGAAATTACGGGAAGATGAAGCAGCCCGGCGAGGCCGCGACC
ATGTACGAACTAGGCGGTCAGGAGGACCGAGCTGCCGCGATCTACGTAGC
CGGAAAGGATCTAAATAAAGCGGCCTTGGTCATGCCACGAGTCACACTGC
CGAAGCTTCTGGGGCAGTACGCAAAAGCTTGCGAAATTACGGGAAGATGG
GAAGAGGCGCTTGAGGCCCACGAGAGGGCACGGGACATGGACTCCGTTGT
TCGACTGTGTCTTCATCAGCTGGACAAACCAGACAAGGCTTTCGCTATCA
TTCGTGAAACGGTTTCCAGATGGGAAGAGGCGCTTGAGGCCCACGAGAGG
GCACGGGACATGGACTCCGTTGTTCGACTGTGTCTTCATCAGCTGGACAA
ACCAGACAAGGCTTTCGCTATCATTCGTGAAACGGTTTCCAGCTCTGGCG
CGGAGATGGTTTCCCGATACTGCCAGGACGCTGGAGATTGGAAAGGAGCG
ATTGAGTTTTTGCTTATTGCCCATAGAACGGCGGATGCCTTCAGTCTTGC
CAAATCCCACGGGCAGATGGACGTCTTCACCAAGCTCTGGCGCGGAGATG
GTTTCCCGATACTGCCAGGACGCTGGAGATTGGAAAGGAGCGATTGAGTT
TTTGCTTATTGCCCATAGAACGGCGGATGCCTTCAGTCTTGCCAAATCCC
ACGGGCAGATGGACGTCTTCACCAAGGTACTCGGAGCGGAGGTATCCCCT
GACGACGCGCTGAGTATTGCTCGGTTCTACGAGGGGCAGCACGAGCTCGG
GAAGGCGGGTAGATTCTATAGGTACTCGGAGCGGAGGTATCCCCTGACGA
CGCGCTGAGTATTGCTCGGTTCTACGAGGGGCAGCACGAGCTCGGGAAGG
CGGGTAGATTCTATAGTTTATGCGGTCAACACCACCGTGCTTTGAAGCTG
TTTTTGCAATGCGGAAAGCAAGAGGTGGAGGCTGCGATAGCCGTAGTAGG
GAAGGCGCGCAACGACATGCTCACGCATACTTTAATTGATTTTTTGATGG
GCGAAACGGACGGTGTGCCGAAAGACCCCAACTACATATACCGGCTCTAT
ATGGCGCTTGGGAACTACTCCCAGTTTATGCGGTCAACACCACCGTGCTT
TGAAGCTGTTTTTGCAATGCGGAAAGCAAGAGGTGGAGGCTGCGATAGCC
GTAGTAGGGAAGGCGCGCAACGACATGCTCACGCATACTTTAATTGATTT
TTTGATGGGCGAAACGGACGGTGTGCCGAAAGACCCCAACTACATATACC
GGCTCTATATGGCGCTTGGGAACTACTCCCAGGCGGCAAAGACGGCCATC
ATAATCGCTAAACAGGAGCAAGACTTGGGAAACTACAAGGTGGCGGCAAA
GACGGCCATCATAATCGCTAAACAGGAGCAAGACTTGGGAAACTACAAGG
TG
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