mRNA_H-paniculata_contig11159.741.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: A0A6H5K106_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K106_9PHAE) HSP 1 Score: 242 bits (618), Expect = 4.900e-75 Identity = 125/173 (72.25%), Postives = 139/173 (80.35%), Query Frame = 1 Query: 1 ETANTSFSPDGRVLVCGTNVNPKANDTGVLKFFDVYNAETSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTSAGGVRVMYDPAISDKGAMLSSTRAHSRLSTNIFLPKHAVGEVYAPHALPMYREEANSKKRKERSDRKDPVKSKKPDPPV 519 ETANTSFSPDGRVLVCG+NV PK++ TGVLKFF+VY AE P+ EVNAAP ASV RV+WHAQTNQ+ CSTSAGGVRVMYDPAISDKGAMLS+ R+HSRL+TN+FLPKHAVGEVYAPHALPM+REE NSKKRKERSDRKDPV+SKKPDPP+ Sbjct: 276 ETANTSFSPDGRVLVCGSNVRPKSDATGVLKFFNVYTAEAEPEL-----------------------EVNAAPEASVARVVWHAQTNQVICSTSAGGVRVMYDPAISDKGAMLSAGRSHSRLNTNMFLPKHAVGEVYAPHALPMFREEQNSKKRKERSDRKDPVRSKKPDPPM 425
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: D7FKU8_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKU8_ECTSI) HSP 1 Score: 240 bits (612), Expect = 2.710e-71 Identity = 124/173 (71.68%), Postives = 138/173 (79.77%), Query Frame = 1 Query: 1 ETANTSFSPDGRVLVCGTNVNPKANDTGVLKFFDVYNAETSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTSAGGVRVMYDPAISDKGAMLSSTRAHSRLSTNIFLPKHAVGEVYAPHALPMYREEANSKKRKERSDRKDPVKSKKPDPPV 519 ETANTSFSPDGRVLVCG+NV PK++ GVLKFF+VY AE P+ EVNAAP ASV RV+WHAQTNQ+ CSTSAGGVRVMYDPAISDKGAMLS+ R+HSRL+TN+FLPKHAVGEVYAPHALPM+REE NSKKRKERSDRKDPV+SKKPDPP+ Sbjct: 639 ETANTSFSPDGRVLVCGSNVRPKSHAMGVLKFFNVYTAEAEPEL-----------------------EVNAAPEASVARVVWHAQTNQVICSTSAGGVRVMYDPAISDKGAMLSAGRSHSRLNTNMFLPKHAVGEVYAPHALPMFREEQNSKKRKERSDRKDPVRSKKPDPPM 788
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: A0A835YIA5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIA5_9STRA) HSP 1 Score: 131 bits (330), Expect = 2.890e-32 Identity = 77/176 (43.75%), Postives = 107/176 (60.80%), Query Frame = 1 Query: 1 ETANTSFSPDGRVLVCGTNVNPKANDTGVLKFFDVYNAE---TSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTSAGGVRVMYDPAISDKGAMLSSTRAHSRLSTNIFLPKHAVGEVYAPHALPMYREEANSKKRKERSDRKDPVKSKKPDPPV 519 ET+N +FSPDGR L GTN PK+ + G +KFF VY A T P+ L+++ AA SVVRV+WH + QI ST+ G +V+YDPA+S KGAM++S R H R +T ++P + VG ++ P+ALPMYREE SK++ RKDP +S+KP+PP+ Sbjct: 540 ETSNVAFSPDGRTLAVGTNAPPKSTECGGIKFFPVYGAVEEVTEPE--------LQISV--------------AAAGESVVRVLWHPKLKQILASTTGGYTKVLYDPAMSVKGAMMTSQRTH-RAATTDYVPDNMVGVIHNPYALPMYREEHTSKRKLAEQARKDPKRSRKPEPPL 692
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: W7U0F2_9STRA (Wd repeat-containing protein 70 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0F2_9STRA) HSP 1 Score: 112 bits (279), Expect = 2.040e-25 Identity = 73/176 (41.48%), Postives = 94/176 (53.41%), Query Frame = 1 Query: 1 ETANTSFSPDGRVLVCGTNVNPKAND-TGVLKFFDVYNAETSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTSAGGVRVMYDPAISDKGAMLSSTRAHSRLSTNIFLPKHAV-GEVYAPHALPMYRE-EANSKKRKERSDRKDPVKSKKPDPPV 519 ++AN +FSPDGRVL CGTNV PK TG LK+F V L A+ V AP ASV + WH + Q+ C TS+G +V+YDP+ S KGA++SS R P V G + P ALPM+R+ E KK++ R DR DP+KSK+PD PV Sbjct: 464 DSANLAFSPDGRVLCCGTNVPPKQEGATGTLKYFQVQGPS--------------LEAV---------LTVGVAPGASVTNLTWHPRLKQVVCGTSSGATKVLYDPSFSVKGALMSSQRVKRPSDPMDAAPVGGVVGRIINPSALPMFRDDEETGKKKRARLDRADPIKSKRPDLPV 616
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: A0A7S2JZJ2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZJ2_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 8.170e-22 Identity = 66/178 (37.08%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 1 ETANTSFSPDGRVLVCGTNVNPKANDTGVLKFFDVYNAETSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTSAGGVRVMYDPAISDKGAMLSSTRAHSRLSTNIFL----PKHAVGEVYAPHALPMYRE-EANSKKRKERSDRKDPVKSKKPDPPV 519 E++N +FSP G +L GT+V P G++K FD ++ + F+ ++C ASVVR+ WHA+ NQI C+ S G RV +DP +S KGA+LS+++A + + L + +VG+V PHALP++R+ E SK+++E+ R DPVKS+KP+PP Sbjct: 64 ESSNCAFSPVGSLLCVGTSVLP-GKGHGMIKIFDFLRKDSGKPV------------VQFV-VQEC---------ASVVRLSWHAKLNQIFCTLSNGSTRVYFDPTMSKKGAVLSTSKAERKKNQLELLLEARVQPSVGDVLTPHALPLFRDSEKKSKRKREKELRSDPVKSRKPEPPT 218
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: B5YML7_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YML7_THAPS) HSP 1 Score: 101 bits (251), Expect = 1.260e-21 Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 1 Query: 1 ETANTSFSPDGRVLVCGTNVNPKANDT-----GVLKFFDVYNAETSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTSAGGVRVMYDPAISDKGAMLSSTRA-----------HSRLSTN---IFLPKHAVGEVYAPHALPMYREEANSKKRKERSDRKDPVKSKKPDPPV 519 E+AN +F PDG++L G++++P+A G +KF+ + E + P L + S D +NAAPNASV+ V WH + NQ+ TS G ++V+YD +S KGA+++++R+ SR T A + P+ALP++REE + ++ + +RKDP K+K P+PPV Sbjct: 806 ESANCAFGPDGKMLCAGSSIDPRAKVASSDVCGKIKFYQLPETEKKSKSKEGGPKSLSSASKKETSILDPVVVLNAAPNASVLGVAWHPKLNQVAFGTSNGMIKVLYDNKLSSKGALIAASRSIRQSDGLSELLRSRAPTGSAAYLTSSSAHDNIIVPNALPIFREEPKATRKTKERERKDPEKTKMPEPPV 997
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: A0A7S1CUK8_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CUK8_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 3.740e-18 Identity = 65/186 (34.95%), Postives = 99/186 (53.23%), Query Frame = 1 Query: 1 ETANTSFSPDGRVLVCGTNVNPKA-NDTGVLKFFDVYNAETSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTSAGGVRVMYDPAISDKGAMLSSTRA--HSRLSTNIFLPKHAVGE----------VYAPHALPMYREEANSKKRKERSDRKDPVKSKKPDPPV 519 E+AN +FSPDG V+ G++VNP+ N G LKF Y P + + + D E++ APNASV+ V WH + NQI TS G + V++D +S KGA++ S+R+ S +++ + G + P+ALP++REEA + ++ + RKDP K+K P PPV Sbjct: 609 ESANCAFSPDGTVVCAGSSVNPREPNCCGKLKF---YRLPEEPKSGKPIKEAKKEKKKKETAILDPIVELDVAPNASVLVVQWHPKLNQIAVGTSDGLIHVLFDQTLSSKGALIPSSRSVRPSDGLSDLLRTRAPTGSAAFLAGSNANIQTPNALPLFREEARATRKVKEEVRKDPEKTKLPQPPV 791
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: A0A0D6QUN9_ARACU (Uncharacterized protein n=1 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QUN9_ARACU) HSP 1 Score: 90.5 bits (223), Expect = 6.660e-18 Identity = 57/173 (32.95%), Postives = 95/173 (54.91%), Query Frame = 1 Query: 10 NTSFSPDGRVLVCGTNVNPKANDTGVLKFFDVYNAETSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTS---AGGVRVMYDPAISDKGAMLSSTRAHSRLSTNIFLPKHAVGEVYAPHALPMYREEANSKKRKERSDRKDPVKSKKPDPPV 519 N +FSPD R+++ GT+V ++N +L F+D E LR + +P SV+R WH + NQ+ +T GG ++YDPA+S++GA++ A + S + F K + + PHALP++R+E + K+++E++ RKDP+KS++PD PV Sbjct: 473 NVAFSPDERLILTGTSVERESNSGSLLCFYDKQKLEL----------ILR---------------IGVSPTHSVIRCAWHPRLNQVFATTGDKKEGGTHILYDPALSERGALVCVAHAPRKKSLDDFEAKPVI---HNPHALPLFRDEPSRKRQREKA-RKDPLKSQRPDLPV 616
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: A0A7S3HGX2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HGX2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.550e-17 Identity = 64/186 (34.41%), Postives = 86/186 (46.24%), Query Frame = 1 Query: 4 TANTSFSPDGRVLVCGTNVNPKANDTGVLK--------------FFDVYNAETSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTSAGGVRVMYDPAISDKGAMLSSTRAHSRLSTNIFLPKHAVGEVYAPHALPMYREEANSKKRKERSDRKDPVKSKKPDPPV 519 TAN +FSPDG +L CGT+ K A +A FL + C + A A+ + V WH TNQI C+ S+G VRV+YDPA S KGA+LS+ +A R AVGE+Y P ALPMYR + +K +++ KDP +K P+ P Sbjct: 285 TANVAFSPDGSLLCCGTSPITTVRSNAFTKAGAGXXXXXXXXXXXXXXXXAPVETEACKSRLYFLEVAGPSTAPCLS----IAVAAGATAIMVKWHPTTNQILCTLSSGAVRVLYDPAFSKKGALLSAHKAPKR--ERDVTDFAAVGEIYNPLALPMYRTDMPGDTKKRKAELKDPYLAKIPEQPA 464
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Match: A0A7S2P1Z3_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P1Z3_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.290e-17 Identity = 63/186 (33.87%), Postives = 99/186 (53.23%), Query Frame = 1 Query: 1 ETANTSFSPDGRVLVCGTNVNPKA-NDTGVLKFFDVYNAETSPDAFTLNPNFLRLNALPFISCRDCDPEVNAAPNASVVRVIWHAQTNQITCSTSAGGVRVMYDPAISDKGAMLSSTRA--HSRLSTNIFLPKHAVGE----------VYAPHALPMYREEANSKKRKERSDRKDPVKSKKPDPPV 519 E+AN + SPDG V+ G++VNP+ N G LKF+ + E + + + D E++ APNASV+ V WH + NQI TS G + V++D +S KGA++ S+R+ S +++ + G + P+ALP++REEA + ++ + RKDP K+K P PPV Sbjct: 431 ESANCALSPDGTVVCAGSSVNPREPNCCGKLKFYRL--PEEPKNGKPIKEAKKEXXXXKETAILDPIVELDVAPNASVLVVQWHPKLNQIAVGTSDGLIHVLFDQTLSSKGALIPSSRSVRPSDGLSDLLRTRAPTGSAAFLAGSNANIQTPNALPLFREEARATRKVKEEVRKDPEKTKLPQPPV 614 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11159.741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11159.741.1 >prot_H-paniculata_contig11159.741.1 ID=prot_H-paniculata_contig11159.741.1|Name=mRNA_H-paniculata_contig11159.741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp ETANTSFSPDGRVLVCGTNVNPKANDTGVLKFFDVYNAETSPDAFTLNPNback to top mRNA from alignment at H-paniculata_contig11159:819..1984+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11159.741.1 ID=mRNA_H-paniculata_contig11159.741.1|Name=mRNA_H-paniculata_contig11159.741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1166bp|location=Sequence derived from alignment at H-paniculata_contig11159:819..1984+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11159:819..1984+ >mRNA_H-paniculata_contig11159.741.1 ID=mRNA_H-paniculata_contig11159.741.1|Name=mRNA_H-paniculata_contig11159.741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1062bp|location=Sequence derived from alignment at H-paniculata_contig11159:819..1984+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |