prot_H-paniculata_contig27073.7408.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig27073.7408.1
Unique Nameprot_H-paniculata_contig27073.7408.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
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BLAST of mRNA_H-paniculata_contig27073.7408.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 6.210e-9
Identity = 32/61 (52.46%), Postives = 38/61 (62.30%), Query Frame = 0 
Query:    1 MSESTAQSAFHTFGKRFAEERFHEWIKLPTGDA--LTATMKAYDAVGFTEAVGSIHVTHIA 59
            MS  T Q  FH F + FA E + E I LPT ++  L   MK YD +GFT AVGS+ VTHIA
Sbjct:  108 MSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIA 168
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig27073.7408.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KNX4_9PHAE6.210e-952.46DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig27073contigH-paniculata_contig27073:2073..2252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig27073.7408.1mRNA_H-paniculata_contig27073.7408.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig27073 1089..2252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig27073.7408.1 ID=prot_H-paniculata_contig27073.7408.1|Name=mRNA_H-paniculata_contig27073.7408.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
MSESTAQSAFHTFGKRFAEERFHEWIKLPTGDALTATMKAYDAVGFTEAV
GSIHVTHIA*
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