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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 1325 |
| Cds size | 1146 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig27.7389.1 >prot_H-paniculata_contig27.7389.1 ID=prot_H-paniculata_contig27.7389.1|Name=mRNA_H-paniculata_contig27.7389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=382bp
MPPKIAQKRLRESTAENGSTSPAIGTAAVAGGEDRVGEGASTIRRTGASS
ISSDTAASGDGDDGDNPPRMKRSRRSDRPKQQQSDGEQQQEDKDVVMEDE
QEGRQAGAGAAWGVAAAGSSKKPASGRRVTTASRRKGSIDSSGGDHTEEE
DTEAEAEAAPSRQAPSKRVRKSSSGATKVATASRASVPASSESIHSQQPQ
PTPTVTNGRQSLLATTANGPAGGRPPRKEPHSAARRTAAAAAAAAAAGSG
SGSESAAPNNSARQSALRNGGASSSAIYRRQSQGQAAAAAKVNGSANGVA
NGGANGSASGNSNGSANGSANGRAVAAADSAAKVAASGSPTRGGVLSSVN
IRQIAGSESPVTGSDNQCAVESSAVRRLNSAG back to topmRNA from alignment at H-paniculata_contig27:22415..24458- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig27.7389.1 ID=mRNA_H-paniculata_contig27.7389.1|Name=mRNA_H-paniculata_contig27.7389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2044bp|location=Sequence derived from alignment at H-paniculata_contig27:22415..24458- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGAATCATGATCCTATTCTTTTGCTCTCGCGGATACACCTTCCAATTTTG
GGTTTGGATGTGTGTATCCCTCACAGCACTTCCTCATACACACCCACTAC
GGCGCGACCATAGACCCTAGTAGCTGCAGAGATCCCTCACTTGTCCTGCC
CGCAACACTCTCGCCAAATACGCTAATTATGCCCCCCAAAATAGCCCAGA
AACGGTTGCGAGAGTCAACGGCCGAAAACGGGAGCACGTCGCCGGCGATC
GGAACAGCTGCTGTTGCGGGGGGGGAAGACAGAGTGGGAGAGGGAGCATC
AACAATACGGCGCACCGGAGCATCGAGCATATCTTCCGACACAGCTGCAT
CAGGGGATGGCGATGACGGAGATAACCCTCCCCGCATGAAGCGCAGCAGG
CGCAGCGATAGACCAAAACAGCAGCAGTCGGACGGGGAGCAGCAGCAGGA
AGACAAGGATGTCGTTATGGAAGACGAACAAGAAGGGAGACAGGCGGGGG
CCGGCGCGGCGTGGGGGGTGGCGGCGGCGGGATCGAGCAAGAAGCCTGCC
TCGGGGAGACGGGTAACGACAGCTAGCAGGAGAAAGGGAAGCATTGATAG
CAGTGGCGGGGATCACACGGAAGAGGTGTGTTGGAATGAGTGTTCTCCGA
TCCTGGCTCGTGCTGCAAGTGATCGCTACCAACATATTTGAAAAGTGGCC
CATTACTTACTCTCCTTCCTTTACTAGAGGCAGCACCAGTATTATCTGTA
AGTTGTGTTTAGGTTCGGGAACATGGGGATATGGGCGGGTATGGGGACTG
TACTGTACTACAGTTGTGTTGTCTTGTATCTTTGGTGTTAACGCAGTTAT
GCGGATATGAAGGCGTGCGAGCGTACGGGGTAGAGGCGGCGTGGAGCTTC
GATTTGAACACTGTACGAGAGCTGACCGGCCAGCAGTATCGCTGTCTGTG
TGTACATTACTTGCGGGATAGCTCGATAGCTCCCTATTAGCAGTTGGGTT
CTTTCGCTACAATGTGTTCTGATTTTCCTTGTTGAGGTTCTTGTACATAC
TGCACGTCCAGACTAATGTACAGTAGATAGGCTCGTACTTATCTCTTTGA
CGACAATCGGAACAGGAATAGTCGAGAGTCTACGGTACGGTGCTCTCTGG
TGCGGATGTAACGTACTTTACTGTGGGATGCTCGCCTGATTTGCCGCGTT
GTCTCTGGACTTCCTCTTTTCGTCTGCGCCCAGTTCTGTCTGTGCGGTAC
CTGTACGTTATTTACGTCTATAATTTTAAGTGCAATGTGACGTTGTATGA
CCTTCTGAAACACAAAAATAAATAATAAACAAAAAATACAAGCAGGAGGA
TACAGAGGCGGAAGCGGAGGCGGCCCCGTCTCGACAAGCACCGAGCAAGC
GCGTCCGCAAGAGCTCTTCAGGAGCAACCAAAGTCGCCACCGCGTCGCGT
GCATCCGTCCCCGCCTCATCCGAATCCATACATTCCCAACAACCACAACC
AACACCGACGGTCACAAACGGCCGTCAATCCCTACTGGCGACCACCGCAA
ACGGCCCGGCAGGAGGAAGACCACCCCGTAAAGAACCCCATTCCGCCGCC
CGACGCACTGCAGCAGCAGCAGCGGCGGCCGCCGCTGCGGGGTCGGGGTC
GGGGTCGGAGTCGGCAGCCCCAAATAACTCCGCTAGACAATCGGCTTTAC
GGAACGGCGGCGCCTCCTCGTCAGCGATTTACAGACGACAATCGCAAGGG
CAAGCGGCGGCGGCGGCAAAGGTGAACGGAAGTGCCAACGGTGTTGCCAA
CGGTGGTGCCAACGGCAGTGCTAGCGGCAATTCCAATGGCAGTGCCAATG
GGAGTGCCAACGGACGTGCAGTAGCGGCGGCAGACTCGGCGGCGAAGGTG
GCGGCGTCGGGATCGCCCACGCGGGGGGGGGTGTTGTCTTCTGTGAACAT
CCGACAGATTGCCGGATCGGAGTCGCCGGTGACCGGTAGCGATAATCAAT
GTGCTGTGGAGTCTTCGGCGGTGCGACGGTTGAACTCAGCGGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig27:22415..24458- >mRNA_H-paniculata_contig27.7389.1 ID=mRNA_H-paniculata_contig27.7389.1|Name=mRNA_H-paniculata_contig27.7389.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2292bp|location=Sequence derived from alignment at H-paniculata_contig27:22415..24458- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCCCCCAAAATAGCCCAGAAACGGTTGCGAGAGTCAACGGCCGAAAA
CGGGAGCACGTCGCCGGCGATCGGAACAGCTGCTGTTGCGGGGGGGGAAG
ACAGAGTGGGAGAGGGAGCATCAACAATACGGCGCACCGGAGCATCGAGC
ATATCTTCCGACACAGCTGCATCAGGGGATGGCGATGACGGAGATAACCC
TCCCCGCATGAAGCGCAGCAGGCGCAGCGATAGACCAAAACAGCAGCAGT
CGGACGGGGAGCAGCAGCAGGAAGACAAGGATGTCGTTATGGAAGACGAA
CAAGAAGGGAGACAGGCGGGGGCCGGCGCGGCGTGGGGGGTGGCGGCGGC
GGGATCGAGCAAGAAGCCTGCCTCGGGGAGACGGGTAACGACAGCTAGCA
GGAGAAAGGGAAGCATTGATAGCAGTGGCGGGGATCACACGGAAGAGATG
CCCCCCAAAATAGCCCAGAAACGGTTGCGAGAGTCAACGGCCGAAAACGG
GAGCACGTCGCCGGCGATCGGAACAGCTGCTGTTGCGGGGGGGGAAGACA
GAGTGGGAGAGGGAGCATCAACAATACGGCGCACCGGAGCATCGAGCATA
TCTTCCGACACAGCTGCATCAGGGGATGGCGATGACGGAGATAACCCTCC
CCGCATGAAGCGCAGCAGGCGCAGCGATAGACCAAAACAGCAGCAGTCGG
ACGGGGAGCAGCAGCAGGAAGACAAGGATGTCGTTATGGAAGACGAACAA
GAAGGGAGACAGGCGGGGGCCGGCGCGGCGTGGGGGGTGGCGGCGGCGGG
ATCGAGCAAGAAGCCTGCCTCGGGGAGACGGGTAACGACAGCTAGCAGGA
GAAAGGGAAGCATTGATAGCAGTGGCGGGGATCACACGGAAGAGGAGGAT
ACAGAGGCGGAAGCGGAGGCGGCCCCGTCTCGACAAGCACCGAGCAAGCG
CGTCCGCAAGAGCTCTTCAGGAGCAACCAAAGTCGCCACCGCGTCGCGTG
CATCCGTCCCCGCCTCATCCGAATCCATACATTCCCAACAACCACAACCA
ACACCGACGGTCACAAACGGCCGTCAATCCCTACTGGCGACCACCGCAAA
CGGCCCGGCAGGAGGAAGACCACCCCGTAAAGAACCCCATTCCGCCGCCC
GACGCACTGCAGCAGCAGCAGCGGCGGCCGCCGCTGCGGGGTCGGGGTCG
GGGTCGGAGTCGGCAGCCCCAAATAACTCCGCTAGACAATCGGCTTTACG
GAACGGCGGCGCCTCCTCGTCAGCGATTTACAGACGACAATCGCAAGGGC
AAGCGGCGGCGGCGGCAAAGGTGAACGGAAGTGCCAACGGTGTTGCCAAC
GGTGGTGCCAACGGCAGTGCTAGCGGCAATTCCAATGGCAGTGCCAATGG
GAGTGCCAACGGACGTGCAGTAGCGGCGGCAGACTCGGCGGCGAAGGTGG
CGGCGTCGGGATCGCCCACGCGGGGGGGGGTGTTGTCTTCTGTGAACATC
CGACAGATTGCCGGATCGGAGTCGCCGGTGACCGGTAGCGATAATCAATG
TGCTGTGGAGTCTTCGGCGGTGCGACGGTTGAACTCAGCGGGGGAGGATA
CAGAGGCGGAAGCGGAGGCGGCCCCGTCTCGACAAGCACCGAGCAAGCGC
GTCCGCAAGAGCTCTTCAGGAGCAACCAAAGTCGCCACCGCGTCGCGTGC
ATCCGTCCCCGCCTCATCCGAATCCATACATTCCCAACAACCACAACCAA
CACCGACGGTCACAAACGGCCGTCAATCCCTACTGGCGACCACCGCAAAC
GGCCCGGCAGGAGGAAGACCACCCCGTAAAGAACCCCATTCCGCCGCCCG
ACGCACTGCAGCAGCAGCAGCGGCGGCCGCCGCTGCGGGGTCGGGGTCGG
GGTCGGAGTCGGCAGCCCCAAATAACTCCGCTAGACAATCGGCTTTACGG
AACGGCGGCGCCTCCTCGTCAGCGATTTACAGACGACAATCGCAAGGGCA
AGCGGCGGCGGCGGCAAAGGTGAACGGAAGTGCCAACGGTGTTGCCAACG
GTGGTGCCAACGGCAGTGCTAGCGGCAATTCCAATGGCAGTGCCAATGGG
AGTGCCAACGGACGTGCAGTAGCGGCGGCAGACTCGGCGGCGAAGGTGGC
GGCGTCGGGATCGCCCACGCGGGGGGGGGTGTTGTCTTCTGTGAACATCC
GACAGATTGCCGGATCGGAGTCGCCGGTGACCGGTAGCGATAATCAATGT
GCTGTGGAGTCTTCGGCGGTGCGACGGTTGAACTCAGCGGGG back to top
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