mRNA_H-paniculata_contig26995.7387.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: A0A6H5L5K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K5_9PHAE) HSP 1 Score: 163 bits (412), Expect = 2.940e-49 Identity = 84/112 (75.00%), Postives = 98/112 (87.50%), Query Frame = 1
Query: 13 NKMAAAVAKIK-SMPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAIVA 345
NK+A+ V KIK ++P LQP ALS MFNSQVKLAGTAGVRVEEL+ RSVVKVAN+R+V+NHIG VHACGMALAAESATGIL+GM+VPDSRLPLCKSMA+DF R ++G + A
Sbjct: 5 NKIASMVGKIKGNLPASLQPWALSLMFNSQVKLAGTAGVRVEELTPHRSVVKVANVRRVQNHIGSVHACGMALAAESATGILVGMSVPDSRLPLCKSMAIDFTRLSQGDVTA 116
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: A0A836CKL5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL5_9STRA) HSP 1 Score: 139 bits (349), Expect = 2.200e-39 Identity = 68/113 (60.18%), Postives = 90/113 (79.65%), Query Frame = 1
Query: 10 LNKMAAAVAKIKS-MPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAIVA 345
LNK A AV+K++S MPT LQP A+S MFN+ VK AGTAG+ ++E+ R+VV + N R+V+NHIGGVHACGMAL +E+ATG+L+ +NVPD+ LPLCKS +DFKR A+G + A
Sbjct: 5 LNKFATAVSKVQSVMPTALQPWAISGMFNTMVKFAGTAGISIDEIGPQRAVVTLKNRRRVQNHIGGVHACGMALLSETATGVLLAINVPDTHLPLCKSFKLDFKRIAKGDLKA 117
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: K0SX00_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SX00_THAOC) HSP 1 Score: 138 bits (347), Expect = 2.470e-39 Identity = 68/113 (60.18%), Postives = 91/113 (80.53%), Query Frame = 1
Query: 10 LNKMAAAVAKIKS-MPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAIVA 345
LNKMA+ + +I+S +P + P A S++FN+ VKLAGTAG+R++ELS ++ + +AN R+V+NHIGG+HAC MALAAESATGIL+GMNVPD+ LPL K+M VDF RR +G I A
Sbjct: 5 LNKMASTIQRIQSTLPESMHPFANSFLFNNMVKLAGTAGIRIDELSHKKATISLANARRVQNHIGGLHACSMALAAESATGILIGMNVPDTHLPLIKTMKVDFVRRCKGDIRA 117
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: D7FSZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSZ6_ECTSI) HSP 1 Score: 137 bits (344), Expect = 9.440e-39 Identity = 67/87 (77.01%), Postives = 78/87 (89.66%), Query Frame = 1
Query: 85 MFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAIVA 345
+F QVKLAGTAGVRVEEL+ RSVVKVAN+R+V+NHIG VHACGMALAAESATGIL+GM+VPDSRLPLCKSMA+DF R ++G + A
Sbjct: 43 IFAFQVKLAGTAGVRVEELTPHRSVVKVANVRRVQNHIGSVHACGMALAAESATGILVGMSVPDSRLPLCKSMAIDFTRLSQGDVTA 129
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: W7T2Q8_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Q8_9STRA) HSP 1 Score: 130 bits (328), Expect = 1.940e-36 Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 1
Query: 10 LNKMAAAVAKIKS-MPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAIVA 345
LN++A VAK+ S +P +P + F+ VKLAGTA + VEE+S R+VV + N R+V+NHIGG+HACGMALAAESATGI++GMNVPDS LPLCKSM V+F RR EG I A
Sbjct: 6 LNRLATQVAKLTSPLPAAYKPWGYTLAFDMMVKLAGTARLWVEEMSDKRAVVHLKNRRRVQNHIGGIHACGMALAAESATGIVVGMNVPDSALPLCKSMKVNFVRRCEGDIKA 118
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: A0A1G4SMM3_9PSED (DUF4442 domain-containing protein n=10 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1G4SMM3_9PSED) HSP 1 Score: 125 bits (314), Expect = 2.030e-34 Identity = 64/111 (57.66%), Postives = 83/111 (74.77%), Query Frame = 1
Query: 13 NKMAAAVAKIKSMPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAIVA 345
N+++ V KI+ +PT LQ ALS +F SQVK AGTA VRV L+ ++V+ +AN RKV+NHI GVHA MAL AESATG L+GMNVPD +LPL KS+ VD+ +RA G++ A
Sbjct: 4 NRLSRIVGKIQQLPTALQSPALSLLFGSQVKFAGTAKVRVHTLTQQQAVMSIANKRKVQNHIKGVHAAAMALLAESATGFLVGMNVPDDKLPLIKSLKVDYLKRATGSLRA 114
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: A0A7S2HF20_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HF20_9STRA) HSP 1 Score: 125 bits (315), Expect = 2.140e-34 Identity = 64/111 (57.66%), Postives = 85/111 (76.58%), Query Frame = 1
Query: 10 LNKMAAAVAKIKS-MPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAI 339
LNKMA+ V K++S +P PL S +FN+ VKLAGTAG+RVE++S + V + N R ++NHIGG+HAC MALAAESATGI++GMNVPD+ +PL K+M VDF +R +G I
Sbjct: 6 LNKMASIVQKMESYLPKSFHPLGYSLLFNNMVKLAGTAGLRVEKMSRNEVEVYLKNRRSIQNHIGGLHACSMALAAESATGIVVGMNVPDTHIPLIKTMNVDFVKRCQGDI 116
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: UPI00143B6D52 (DUF4442 domain-containing protein n=1 Tax=Solimonas marina TaxID=2714601 RepID=UPI00143B6D52) HSP 1 Score: 124 bits (310), Expect = 8.210e-34 Identity = 62/111 (55.86%), Postives = 84/111 (75.68%), Query Frame = 1
Query: 13 NKMAAAVAKIKSMPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAIVA 345
N++A AVA + +P L+ A + +FNSQV+ AGTAG+R E L+ +++VV VAN R+V+NHIGGVHA MAL AE+ATG + GMNVPD +LPL KSM VD++RR +G + A
Sbjct: 3 NRLAKAVAWLAPLPASLRRRATTLLFNSQVRFAGTAGLRFEALTVEQAVVVVANRRRVQNHIGGVHAAAMALLAETATGAVFGMNVPDDKLPLLKSMHVDYQRRTQGGLRA 113
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: A0A1H9F8I9_9GAMM (Acyl-coenzyme A thioesterase PaaI, contains HGG motif n=1 Tax=Solimonas aquatica TaxID=489703 RepID=A0A1H9F8I9_9GAMM) HSP 1 Score: 123 bits (309), Expect = 1.200e-33 Identity = 61/111 (54.95%), Postives = 82/111 (73.87%), Query Frame = 1
Query: 13 NKMAAAVAKIKSMPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAIVA 345
N ++ VA+++ +P L AL+ FNSQV+ AGT G R E LSA +++V +AN RKVRNHIGG+HA MAL AE+ +G + GMNVPD +LPL KSM VD++RRA+GA+ A
Sbjct: 4 NLLSRVVAQLERLPAPLARRALTLAFNSQVRFAGTGGARFEHLSATQAIVHMANRRKVRNHIGGIHAAAMALLAETTSGAVFGMNVPDDKLPLLKSMHVDYQRRAQGALKA 114
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Match: A0A662WWF6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WWF6_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.750e-33 Identity = 60/115 (52.17%), Postives = 86/115 (74.78%), Query Frame = 1
Query: 1 MANLNKMAAAVAKIKSMPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADRSVVKVANIRKVRNHIGGVHACGMALAAESATGILMGMNVPDSRLPLCKSMAVDFKRRAEGAIVA 345
M LN++ AAV +P +P ALS +FNSQVK+A T G++++ELSA R+ + + N R+V+NHIGGVHACGMAL AESA+G++ GMNV DS +P+ KSM++ + +RA+G + A
Sbjct: 1 MNRLNRLVAAVNTTSLLPAAAKPAALSLLFNSQVKMAFTCGIQIQELSAQRAQLALRNRRRVQNHIGGVHACGMALLAESASGVVFGMNVRDSCIPVIKSMSIRYTKRAQGDLQA 115 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26995.7387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26995.7387.1 >prot_H-paniculata_contig26995.7387.1 ID=prot_H-paniculata_contig26995.7387.1|Name=mRNA_H-paniculata_contig26995.7387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp MANLNKMAAAVAKIKSMPTVLQPLALSYMFNSQVKLAGTAGVRVEELSADback to top mRNA from alignment at H-paniculata_contig26995:146..2052- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26995.7387.1 ID=mRNA_H-paniculata_contig26995.7387.1|Name=mRNA_H-paniculata_contig26995.7387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1907bp|location=Sequence derived from alignment at H-paniculata_contig26995:146..2052- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26995:146..2052- >mRNA_H-paniculata_contig26995.7387.1 ID=mRNA_H-paniculata_contig26995.7387.1|Name=mRNA_H-paniculata_contig26995.7387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=690bp|location=Sequence derived from alignment at H-paniculata_contig26995:146..2052- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |