prot_H-paniculata_contig26967.7378.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26967.7378.1
Unique Nameprot_H-paniculata_contig26967.7378.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length138
Homology
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BLAST of mRNA_H-paniculata_contig26967.7378.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 5.300e-16
Identity = 58/145 (40.00%), Postives = 78/145 (53.79%), Query Frame = 0 
Query:   15 LAVTPSTSLDLSSVFACEDGAFEVQWSGTVSITETIRIGRGTTVAIIG--------------GGSDISGGTSDGET------AEVNQFAAIAAVNAF--GPIFVANGSVLHLEGIAIRYGNATDSVGEGLVNGGGVHALDADVTV 137
            LAV+P++ +DL +VF CEDG FEV WSG VS+  TI IG GTTV I G              G +  S  + D E          +  +A+ A +    GPIF  NG  L L  +A+R GNAT      + +GGGVHA+ ++VT+
Sbjct:   55 LAVSPTSGVDLETVFDCEDGEFEVVWSGEVSVPGTIYIGSGTTVNIYGEDTTTXXXXXXSGIGSTGFSSFSGDDELWSGLSLPRDDLSSAVVAGSGLSDGPIFFVNGGQLSLNALAVRDGNATGDSNATVDSGGGVHAVQSNVTI 199
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26967.7378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K4A5_9PHAE5.300e-1640.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26967contigH-paniculata_contig26967:2695..3108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26967.7378.1mRNA_H-paniculata_contig26967.7378.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26967 2421..3108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26967.7378.1 ID=prot_H-paniculata_contig26967.7378.1|Name=mRNA_H-paniculata_contig26967.7378.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=138bp
MASAAPCDSTAQESLAVTPSTSLDLSSVFACEDGAFEVQWSGTVSITETI
RIGRGTTVAIIGGGSDISGGTSDGETAEVNQFAAIAAVNAFGPIFVANGS
VLHLEGIAIRYGNATDSVGEGLVNGGGVHALDADVTVV
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