mRNA_H-paniculata_contig26954.7376.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig26954.7376.1
Unique NamemRNA_H-paniculata_contig26954.7376.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: A0A6H5K6Q8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Q8_9PHAE)

HSP 1 Score: 335 bits (858), Expect = 2.100e-113
Identity = 171/199 (85.93%), Postives = 187/199 (93.97%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLAEASGRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            +EAVGK+VAE+NL+HIS MM TFK SLEEFARKYKKDIN DPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVE+CLATRSVNGGLMALPELLQRLR KGNRK +Q+ISADDV+RATSKLQVLG GF +LEIG TTMVVSVPRELSSDHSAVLLLAEASGR+TEA+I+++L+W+  RPRRVL ELMQ
Sbjct:   21 FEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISADDVRRATSKLQVLGSGFALLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEELQWEGGRPRRVLDELMQ 219
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BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: D8LQG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQG3_ECTSI)

HSP 1 Score: 311 bits (797), Expect = 4.830e-104
Identity = 166/218 (76.15%), Postives = 181/218 (83.03%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGV-------------------DPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLAEASGRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            +EAVGK+VAE+NL+HIS MM TFK SLEEFARKYKKDIN DPAFRQQFQVMCASIG                    D    N+GFWAEVLGVGDFYYELAVQIVE+CLATRSVNGGLMALPELLQRLR KGNRK +Q+IS DDV+RATSKLQVLG GF VLEIG TTMVVSVPRELSSDHSAVLLLAEASGR+TEA+I++KL+W+  RPRRVL ELMQ
Sbjct:    8 FEAVGKRVAEENLSHISGMMATFKGSLEEFARKYKKDINQDPAFRQQFQVMCASIGCERGRGKERDIARGVEGAKRDRDMHNRGFWAEVLGVGDFYYELAVQIVEVCLATRSVNGGLMALPELLQRLRAKGNRKKRQEISTDDVRRATSKLQVLGSGFSVLEIGKTTMVVSVPRELSSDHSAVLLLAEASGRITEADISEKLQWEGGRPRRVLDELMQ 225
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BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: A0A835YIN3_9STRA (EAP30/Vps36 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIN3_9STRA)

HSP 1 Score: 233 bits (594), Expect = 4.070e-73
Identity = 127/221 (57.47%), Postives = 152/221 (68.78%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIG----------------------VDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLAEASGRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            +E VG+  A +N+AH+   ++TFK  LE+FARKYKK IN DPAFRQQFQ MCASIG                      +DPLASNKGFWAEVLGVGDFYYELAVQI E+C+ATR  NGGLMAL ELLQRLR + ++K+   IS DD+KRA +KL+VLG GF ++E+G T MV+SVPRELS+D SAVL  AE SG  +   +   L W  DR RR L  L Q
Sbjct:   21 FEVVGQAAAAENMAHVQATLETFKGHLEDFARKYKKSINQDPAFRQQFQTMCASIGGMGKGRHGALREQCRPHNCASHLDPLASNKGFWAEVLGVGDFYYELAVQITEVCIATRETNGGLMALQELLQRLRARRSKKSPA-ISLDDIKRAIAKLKVLGRGFALVEVGKTQMVLSVPRELSNDASAVLQAAEGSGHASVRALCVGLSWTQDRARRALTALAQ 240
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BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: W7TGH7_9STRA (EAP30 family protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGH7_9STRA)

HSP 1 Score: 223 bits (567), Expect = 3.490e-69
Identity = 113/200 (56.50%), Postives = 152/200 (76.00%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLAEAS-GRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            + ++GK++ E+N+ H++ +M TFK SLE+FARK+KKDIN +P  R +F  MCA IGVDPLASNKGFWA++LGVGDFYYELAVQI+EICL TRS+NGGL+ L +L QR+++   R+   KIS +D+K A +K+ +LG GF +L+ G TT+VVSVP ELSSDH+A+L +A+AS   VT  E+  KL+W   R R  L  +MQ
Sbjct:   20 FTSLGKELQEENINHVTGLMATFKESLEDFARKHKKDINANPVLRAEFNKMCAGIGVDPLASNKGFWAQLLGVGDFYYELAVQIIEICLFTRSLNGGLICLSDLTQRVQK---RRKVDKISTEDIKIAINKVHLLGAGFSLLQSGKTTLVVSVPTELSSDHAAILQMAQASDSHVTVGELVQKLQWVEKRVRLALDLMMQ 216
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BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: A0A067BX53_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067BX53_SAPPC)

HSP 1 Score: 216 bits (551), Expect = 5.200e-67
Identity = 112/200 (56.00%), Postives = 146/200 (73.00%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLA-EASGRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            YE VG ++ + +LAH+   +D FK++LE FA KYK  I  DPAFR +FQVMC+ IGVDPLAS KGFW+E+L +GDFYYEL VQI+E+C+ TR  NGGL+ + ELL RL +K      Q+IS DD+KR+  KL+VLG GF+V+E+GA TM+V+VP ELS DHSA+LLLA E  G VT A + +KL WD +R    L  L++
Sbjct:   21 YEEVGTQLTQSHLAHVQAQLDVFKTNLEAFAVKYKAQIKKDPAFRMRFQVMCSKIGVDPLASQKGFWSELLDMGDFYYELGVQIIEVCILTRPKNGGLIPIHELL-RLLDKKRGLRMQRISEDDIKRSVKKLKVLGEGFQVIELGAKTMIVTVPVELSQDHSAILLLAQETQGMVTTALLAEKLLWDVNRSTIALNVLLR 219
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BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: UPI001E1D413E (vacuolar-sorting protein SNF8-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D413E)

HSP 1 Score: 214 bits (545), Expect = 4.070e-66
Identity = 105/199 (52.76%), Postives = 148/199 (74.37%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLAEASGRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            Y+  G ++AED  A +S+ M+TFKS LE+F  K+K +I  DP FR QFQ MCAS+GVDPLAS+KGFWAE+LGVGDFYYEL VQI+E+CLAT   NGGL+++ EL ++L++  ++K+Q  +S DD+ RA  KL+ LG GF V+ +G T M+ SVP ELS DH+AV+  A++S  VT++++T  L+W+ +R  R L  L++
Sbjct:   21 YKDKGNEIAEDQFAQMSKQMETFKSHLEDFTAKHKDEIRKDPEFRAQFQEMCASVGVDPLASSKGFWAEMLGVGDFYYELGVQIIEVCLATSHRNGGLISIEELKEKLKKSRSKKSQD-VSYDDLLRAIKKLKALGNGFTVIPVGGTYMIQSVPGELSMDHTAVIQQAQSSAHVTKSKLTKDLKWEEERANRALNYLVK 218
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BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: A0A485LB62_9STRA (Aste57867_17359 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB62_9STRA)

HSP 1 Score: 214 bits (544), Expect = 1.250e-65
Identity = 110/200 (55.00%), Postives = 148/200 (74.00%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLA-EASGRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            YE VG ++ +++LAH+ E +D FK++L+ FA KYK  I  DP FR++FQVMCA IGVDPLAS KGFW+E+L +GDFYYELAVQI+E+C+ TR+ NGGL+A+ +LL  L  +      QKIS DD+KR+  KL+VLG GF V+E+GA TM+V+VP ELS DHS++LLLA E  G V+   + +KL WDS+R    L  L++
Sbjct:   38 YEEVGAQLEQNHLAHVQEQLDVFKTNLQTFAVKYKSQIKKDPEFRKRFQVMCAKIGVDPLASQKGFWSELLDMGDFYYELAVQIIEVCIRTRNKNGGLIAIQDLLTLLDARRG-PMMQKISDDDIKRSVKKLKVLGEGFNVIELGAKTMIVTVPVELSQDHSSILLLAQETQGVVSVPVLAEKLGWDSNRSSIALNVLLK 236
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BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: A0A851EH18_9CORV (Vacuolar-sorting protein SNF8 (Fragment) n=9 Tax=Corvoidea TaxID=192204 RepID=A0A851EH18_9CORV)

HSP 1 Score: 213 bits (541), Expect = 1.320e-65
Identity = 110/199 (55.28%), Postives = 146/199 (73.37%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLAEASGRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            Y+  G  +AED LA +S+ ++TF+++LEEFA K+K++I   P FR QFQ MCA+IGVDPLAS KGFW+E+LGVGDFYYEL VQI+E+CLA +  NGGL+ L EL QR+  KG  K  Q +S DD+ RA  KL+VLG GF ++ +G T +V SVP EL+ DH+ VL LAE  G VT  EI   LRW+++R R+VL+ L++
Sbjct:    4 YKERGTVLAEDQLAQMSKQLETFRTNLEEFASKHKQEIRKSPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELQQRVL-KGRGKFAQDVSQDDLLRAIKKLKVLGSGFGIIPVGGTFLVQSVPAELNMDHTVVLQLAEKKGFVTVGEIQASLRWEAERARQVLEHLLK 201
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BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: A0A7K6DIY4_9PASS (Vacuolar-sorting protein SNF8 (Fragment) n=1 Tax=Origma solitaria TaxID=720586 RepID=A0A7K6DIY4_9PASS)

HSP 1 Score: 213 bits (542), Expect = 1.400e-65
Identity = 109/199 (54.77%), Postives = 148/199 (74.37%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLAEASGRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            Y+  G  +AED LA +S+ +DTF+++LEEFA K+K++I  +P FR QFQ MCA+IGVDPLAS KGFW+E+LGVGDFYYEL VQI+E+CLA +  NGGL+ L EL Q++  KG  K  Q +S DD+ RA  KL+VLG GF V+ +G T +V SVP EL+ DH+ VL LAE  G VT +EI   L+W+++R ++VL+ L++
Sbjct:   21 YKERGTVLAEDQLAQMSKQLDTFRTNLEEFASKHKQEIRKNPEFRVQFQDMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLITLEELQQQVL-KGRGKFAQDVSQDDLLRAIKKLKVLGSGFGVIPVGGTVLVQSVPAELNMDHTVVLQLAEKKGFVTVSEICSSLKWETERAKQVLEHLLK 218
[Close]
BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Match: A0A6G0XBH3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBH3_9STRA)

HSP 1 Score: 213 bits (541), Expect = 1.640e-65
Identity = 108/200 (54.00%), Postives = 148/200 (74.00%), Query Frame = 1 
Query:    1 YEAVGKKVAEDNLAHISEMMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGVDPLASNKGFWAEVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQKISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLA-EASGRVTEAEITDKLRWDSDRPRRVLQELMQ 597
            YE VG ++ + +LAH+ E ++ FK++L+ FA KYK  I  DP FR++FQVMCA IGVDPLAS KGFW+E+L +GDFYYELAVQI+E+C+ TR+ NGGL+A+ +LL  L ++    + QKIS DD+KR+  KL+VLG GF V+E+GA TM+V+VP ELS DHS++LLLA E    VT   + +KL WD++R    L  L++
Sbjct:   21 YEEVGAQLTQSHLAHVQEQLEVFKTNLQTFAVKYKSQIKRDPEFRKRFQVMCAKIGVDPLASQKGFWSELLDMGDFYYELAVQIIEVCILTRNKNGGLIAIQDLLALLDQRRG-PSMQKISDDDIKRSVKKLKVLGEGFNVIELGAKTMIVTVPVELSQDHSSILLLAQETQSVVTIKTLAEKLGWDANRSSLALNVLLR 219
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26954.7376.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6Q8_9PHAE2.100e-11385.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQG3_ECTSI4.830e-10476.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YIN3_9STRA4.070e-7357.47EAP30/Vps36 family-domain-containing protein n=1 T... [more]
W7TGH7_9STRA3.490e-6956.50EAP30 family protein n=2 Tax=Monodopsidaceae TaxID... [more]
A0A067BX53_SAPPC5.200e-6756.00Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
UPI001E1D413E4.070e-6652.76vacuolar-sorting protein SNF8-like n=1 Tax=Mercena... [more]
A0A485LB62_9STRA1.250e-6555.00Aste57867_17359 protein n=1 Tax=Aphanomyces stella... [more]
A0A851EH18_9CORV1.320e-6555.28Vacuolar-sorting protein SNF8 (Fragment) n=9 Tax=C... [more]
A0A7K6DIY4_9PASS1.400e-6554.77Vacuolar-sorting protein SNF8 (Fragment) n=1 Tax=O... [more]
A0A6G0XBH3_9STRA1.640e-6554.00Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26954contigH-paniculata_contig26954:119..1931 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score290.0
Seed ortholog evalue7.8e-76
Seed eggNOG ortholog2880.D8LQG3
Preferred nameSNF8
KEGG koko:K12188
KEGG Pathwayko04144,map04144
KEGG ModuleM00410
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000429,GO:0000430,GO:0000433,GO:0000578,GO:0000741,GO:0000742,GO:0000746,GO:0000747,GO:0000814,GO:0003002,GO:0003006,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0005768,GO:0005770,GO:0005829,GO:0005886,GO:0006355,GO:0006357,GO:0006403,GO:0006508,GO:0006511,GO:0006605,GO:0006623,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006862,GO:0006886,GO:0006914,GO:0006996,GO:0006997,GO:0007032,GO:0007034,GO:0007154,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007350,GO:0007351,GO:0007389,GO:0007584,GO:0008022,GO:0008104,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0008298,GO:0008358,GO:0008593,GO:0008595,GO:0009056,GO:0009057,GO:0009605,GO:0009790,GO:0009798,GO:0009880,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009948,GO:0009952,GO:0009966,GO:0009968,GO:0009987,GO:0009991,GO:0009994,GO:0010008,GO:0010256,GO:0010468,GO:0010556,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010648,GO:0010796,GO:0010797,GO:0010941,GO:0012505,GO:0015031,GO:0015711,GO:0015748,GO:0015833,GO:0015865,GO:0015867,GO:0015868,GO:0015893,GO:0015931,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016247,GO:0016482,GO:0016604,GO:0017157,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023051,GO:0023057,GO:0030154,GO:0030163,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031410,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0032456,GO:0032501,GO:0032502,GO:0032504,GO:0032509,GO:0032511,GO:0032535,GO:0032879,GO:0032991,GO:0033036,GO:0033365,GO:0033620,GO:0034613,GO:0035282,GO:0036257,GO:0036258,GO:0036452,GO:0042058,GO:0042059,GO:0042176,GO:0042221,GO:0042493,GO:0042802,GO:0042803,GO:0042886,GO:0042981,GO:0043067,GO:0043162,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043328,GO:0043632,GO:0043900,GO:0043903,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0044764,GO:0045013,GO:0045014,GO:0045022,GO:0045184,GO:0045324,GO:0045450,GO:0045732,GO:0045892,GO:0045921,GO:0045934,GO:0045990,GO:0046015,GO:0046618,GO:0046907,GO:0046983,GO:0047485,GO:0048284,GO:0048468,GO:0048469,GO:0048471,GO:0048477,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051036,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051252,GO:0051253,GO:0051503,GO:0051603,GO:0051641,GO:0051649,GO:0051704,GO:0051716,GO:0055037,GO:0060255,GO:0060627,GO:0060810,GO:0060811,GO:0061635,GO:0061919,GO:0061984,GO:0061985,GO:0061986,GO:0061987,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0070925,GO:0071496,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072594,GO:0072665,GO:0072666,GO:0080090,GO:0090066,GO:0097708,GO:0098588,GO:0098772,GO:0098796,GO:0098805,GO:0098927,GO:1901184,GO:1901185,GO:1901264,GO:1901564,GO:1901565,GO:1901575,GO:1902679,GO:1903506,GO:1903507,GO:1903530,GO:1903532,GO:1903541,GO:1903543,GO:1903772,GO:1903900,GO:1904669,GO:1990904,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
EggNOG OGsKOG3341@1,KOG3341@2759
Ec32 ortholog descriptionWinged helix-turn-helix DNA-binding domain
Ec32 orthologEc-10_005530.1
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131,ko04147
Exons4
Model size747
Cds size570
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26954.7376.1prot_H-paniculata_contig26954.7376.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig26954 242..1877 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929810.0056913-UTR-H-paniculata_contig26954:118..2411622929810.0056913-UTR-H-paniculata_contig26954:118..241Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26954 119..241 -
1691481020.9560294-UTR-H-paniculata_contig26954:118..2411691481020.9560294-UTR-H-paniculata_contig26954:118..241Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26954 119..241 -
1622929810.083465-UTR-H-paniculata_contig26954:1877..19311622929810.083465-UTR-H-paniculata_contig26954:1877..1931Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26954 1878..1931 -
1691481021.0150745-UTR-H-paniculata_contig26954:1877..19311691481021.0150745-UTR-H-paniculata_contig26954:1877..1931Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig26954 1878..1931 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929810.018663-CDS-H-paniculata_contig26954:241..4451622929810.018663-CDS-H-paniculata_contig26954:241..445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26954 242..445 -
1691481020.9716618-CDS-H-paniculata_contig26954:241..4451691481020.9716618-CDS-H-paniculata_contig26954:241..445Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26954 242..445 -
1622929810.0413463-CDS-H-paniculata_contig26954:729..8431622929810.0413463-CDS-H-paniculata_contig26954:729..843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26954 730..843 -
1691481020.9821584-CDS-H-paniculata_contig26954:729..8431691481020.9821584-CDS-H-paniculata_contig26954:729..843Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26954 730..843 -
1622929810.0567372-CDS-H-paniculata_contig26954:1091..12301622929810.0567372-CDS-H-paniculata_contig26954:1091..1230Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26954 1092..1230 -
1691481020.9944916-CDS-H-paniculata_contig26954:1091..12301691481020.9944916-CDS-H-paniculata_contig26954:1091..1230Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26954 1092..1230 -
1622929810.0707114-CDS-H-paniculata_contig26954:1764..18771622929810.0707114-CDS-H-paniculata_contig26954:1764..1877Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26954 1765..1877 -
1691481021.0054817-CDS-H-paniculata_contig26954:1764..18771691481021.0054817-CDS-H-paniculata_contig26954:1764..1877Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig26954 1765..1877 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig26954.7376.1

>prot_H-paniculata_contig26954.7376.1 ID=prot_H-paniculata_contig26954.7376.1|Name=mRNA_H-paniculata_contig26954.7376.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=190bp
MMDTFKSSLEEFARKYKKDINVDPAFRQQFQVMCASIGVDPLASNKGFWA
EVLGVGDFYYELAVQIVEICLATRSVNGGLMALPELLQRLREKGNRKNQQ
KISADDVKRATSKLQVLGGGFKVLEIGATTMVVSVPRELSSDHSAVLLLA
EASGRVTEAEITDKLRWDSDRPRRVLQELMQVNATGDLR*
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mRNA from alignment at H-paniculata_contig26954:119..1931-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig26954.7376.1 ID=mRNA_H-paniculata_contig26954.7376.1|Name=mRNA_H-paniculata_contig26954.7376.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1813bp|location=Sequence derived from alignment at H-paniculata_contig26954:119..1931- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACGAGGCAGTCGGCAAAAAAGTTGCAGAAGACAACCTGGCCCACATTTC
GGAAATGATGGATACCTTCAAGAGCAGCCTCGAAGAATTTGCGCGCAAGT
ACAAGAAGGACATTAACGTAGACCCAGCGTTCCGGCAGCAGTTTCAAGTC
ATGTGTGCAAGCATTGGGTGAGAGCTTCATTCGCGATTGTTCTCTCCTAC
AATGACGGATTGGGGTGACACAGTCGTCGCGGGGGTATTACTTTTGGTGT
ACACAGAGAGCGTGCCTTCAGCAGAGTACACAGTGAGTGAAAGCAGAGAA
GTGATGCTACCTTACTCTAATGCGACAGCGTCGGCAAGTTACGTGCCTGC
GTCAATCCCGTCGACTGCGGCATGAAGTGGGCATTGCCTAAGCTGCTGCT
GCGTTTTGCCCATTGAACAATGACGAGGCAAACGTGGATTTGGGTCCCTT
CCCAAAATGTGAAAGAGTAAGCTGCGCCCATTTCAACTGCTCTGTGTTCT
ATTGGTTGATTCCTCGTGATTCTATTCTCTCCTCGGAAAGCTGTTGTGTG
GACCTATTACAGCTTATGGGTGTGCTTATGCCTTCTACTGCCATCCCCAC
TGATTTCTGCAAATGGTTTCGAGACTAAGTAGCGTTCAGCTGAGATGAGA
TATCGTGTTCTTGTCTTTCTTTGCCATCTTTCTTCGTGATTCATCCCTCA
GAGTCGACCCTCTGGCATCAAACAAAGGATTCTGGGCTGAGGTGCTAGGG
GTTGGCGATTTCTACTATGAGCTTGCTGTTCAAATCGTCGAGATTTGCCT
GGCGACAAGATCAGTGAACGGAGGCCTTATGGCCCTTCCGGTGAAGAATA
TGCATGCAAGAGTTAGAGTCACAGGACCTGCGGATGAAACTTGTTGCTCG
CTTGTTCGATATTCCGGAGGTACTGCAGCGTGGTAATCTGATGTCTATGT
CGTCGATGACTCTACTTGAGTTGTCCTGTGAGCTATTCGCGCGGGAATAC
CTCTTCTTTGCGAATTTTGTGTCTTTTCGCGCCCGTGATGGAAATGGCAA
ACGAAACATTCTTATGTTTGGGCTTGCCTCATCCACAGGAGCTGTTGCAG
CGGCTACGAGAGAAGGGAAATCGAAAAAACCAACAGAAGATCTCAGCTGA
TGATGTGAAGCGAGCAACGTCCAAGCTGCAGGTCTTAGGAGGTGGTTTCA
AGGTCAGAGACCCGGCGATTTGATAGTACGTGTATGCGCTGTTAACGCTC
CAGGGTGTGTAAACAAATCTAGCACACATCTGGACACATTTGTATAACCC
GTCATGCGAGTCTCATCCCACAAAGCTAGCAAGATCATAATATCCGTTTC
ATGCTTTCGCCGTGAGGTCAAGGCCATCGTGAGGTAATGTTGAGCTTAGC
ATGAAACATGTCCAGTAGCTGTGGAATAAGTTCGAGACCATTTTGTCTCA
GTGTTTTTGTACGTAAACGGATGGTTTGTTCTTCAGGTACTCGAGATCGG
CGCAACCACTATGGTTGTGTCTGTGCCCCGAGAATTGAGCTCTGACCACT
CGGCCGTTCTATTGCTTGCGGAAGCGTCCGGCCGCGTGACTGAAGCGGAG
ATTACGGATAAATTGCGATGGGATAGCGACCGCCCGCGGAGGGTGCTGCA
GGAACTCATGCAGGTAAATGCCACGGGGGACCTCAGGTAAAAAACATTTT
TGATGCTATTATATATACCTCATACATTAATGAAATTGTGAGCTGGTCTC
AAGAGTTGCTTGTCTCAAGCGTTTGCATATTGTCGTTGTTGTTGCAGCCT
GCACGGCGGGGGG
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Coding sequence (CDS) from alignment at H-paniculata_contig26954:119..1931-

>mRNA_H-paniculata_contig26954.7376.1 ID=mRNA_H-paniculata_contig26954.7376.1|Name=mRNA_H-paniculata_contig26954.7376.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1140bp|location=Sequence derived from alignment at H-paniculata_contig26954:119..1931- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATGGATACCTTCAAGAGCAGCCTCGAAGAATTTGCGCGCAAGTACAA
GAAGGACATTAACGTAGACCCAGCGTTCCGGCAGCAGTTTCAAGTCATGT
GTGCAAGCATTGGATGATGGATACCTTCAAGAGCAGCCTCGAAGAATTTG
CGCGCAAGTACAAGAAGGACATTAACGTAGACCCAGCGTTCCGGCAGCAG
TTTCAAGTCATGTGTGCAAGCATTGGAGTCGACCCTCTGGCATCAAACAA
AGGATTCTGGGCTGAGGTGCTAGGGGTTGGCGATTTCTACTATGAGCTTG
CTGTTCAAATCGTCGAGATTTGCCTGGCGACAAGATCAGTGAACGGAGGC
CTTATGGCCCTTCCGAGTCGACCCTCTGGCATCAAACAAAGGATTCTGGG
CTGAGGTGCTAGGGGTTGGCGATTTCTACTATGAGCTTGCTGTTCAAATC
GTCGAGATTTGCCTGGCGACAAGATCAGTGAACGGAGGCCTTATGGCCCT
TCCGGAGCTGTTGCAGCGGCTACGAGAGAAGGGAAATCGAAAAAACCAAC
AGAAGATCTCAGCTGATGATGTGAAGCGAGCAACGTCCAAGCTGCAGGTC
TTAGGAGGTGGTTTCAAGGAGCTGTTGCAGCGGCTACGAGAGAAGGGAAA
TCGAAAAAACCAACAGAAGATCTCAGCTGATGATGTGAAGCGAGCAACGT
CCAAGCTGCAGGTCTTAGGAGGTGGTTTCAAGGTACTCGAGATCGGCGCA
ACCACTATGGTTGTGTCTGTGCCCCGAGAATTGAGCTCTGACCACTCGGC
CGTTCTATTGCTTGCGGAAGCGTCCGGCCGCGTGACTGAAGCGGAGATTA
CGGATAAATTGCGATGGGATAGCGACCGCCCGCGGAGGGTGCTGCAGGAA
CTCATGCAGGTAAATGCCACGGGGGACCTCAGGTAAGTACTCGAGATCGG
CGCAACCACTATGGTTGTGTCTGTGCCCCGAGAATTGAGCTCTGACCACT
CGGCCGTTCTATTGCTTGCGGAAGCGTCCGGCCGCGTGACTGAAGCGGAG
ATTACGGATAAATTGCGATGGGATAGCGACCGCCCGCGGAGGGTGCTGCA
GGAACTCATGCAGGTAAATGCCACGGGGGACCTCAGGTAA
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