prot_H-paniculata_contig26947.7373.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26947.7373.1
Unique Nameprot_H-paniculata_contig26947.7373.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
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BLAST of mRNA_H-paniculata_contig26947.7373.1 vs. uniprot
Match: A0A6H5K0N2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0N2_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 8.630e-17
Identity = 43/76 (56.58%), Postives = 55/76 (72.37%), Query Frame = 0 
Query:    1 FANLQAAILCNQTACYLKIGDGPLAMEAADRASEIMSTV-DSAAGRKAAYRRACALEAVGEWDESRAVFKRVMAVD 75
            F +LQ A+LCNQ AC+LK+G    A+ AA+RAS + +   D  AG KAAYRRACALEAVG+W E+R  F+ V+ VD
Sbjct:  452 FVDLQVAVLCNQAACFLKMGQALSALAAAERASSLKAVAADCPAGIKAAYRRACALEAVGDWGEARRAFRNVLDVD 527
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26947.7373.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K0N2_9PHAE8.630e-1756.58Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..75
e-value: 4.8E-10
score: 41.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 5..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26947contigH-paniculata_contig26947:2818..3042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26947.7373.1mRNA_H-paniculata_contig26947.7373.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26947 2818..3042 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26947.7373.1 ID=prot_H-paniculata_contig26947.7373.1|Name=mRNA_H-paniculata_contig26947.7373.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
FANLQAAILCNQTACYLKIGDGPLAMEAADRASEIMSTVDSAAGRKAAYR
RACALEAVGEWDESRAVFKRVMAVD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf