prot_H-paniculata_contig26924.7366.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26924.7366.1
Unique Nameprot_H-paniculata_contig26924.7366.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length137
Homology
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A6H5K5A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5A5_9PHAE)

HSP 1 Score: 142 bits (359), Expect = 9.280e-37
Identity = 71/136 (52.21%), Postives = 92/136 (67.65%), Query Frame = 0
Query:    1 MVIDYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRLDLVLERLMAVGLFAAAY 136
            +V D+RAAN QVE+VP   PN E    Q    K + +LDLLQ YWQCPLA +AQE+F I T  GL+TP RVPQG++N T+YFQ  +  +L+GL    C V+VDD V W  D+ +LL  LDL+L+RL   GL+ AA+
Sbjct:  812 LVSDFRAANKQVEKVPGVMPNPEASIAQLSAAKFYGSLDLLQWYWQCPLAPEAQEIFTIATPGGLYTPKRVPQGILNATSYFQATLTRILDGLN---CFVWVDDVVYWGMDKDDLLDTLDLILDRLEGAGLYVAAH 944          
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 5.430e-33
Identity = 69/133 (51.88%), Postives = 83/133 (62.41%), Query Frame = 0
Query:    4 DYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRLDLVLERLMAVGLFAAAY 136
            DY  AN Q E+VP   P+ E       G   F  LDLLQGYWQ PLAE A+E+F I T  GLF PTRVPQ V+N T YFQ +M  +L+GL    C V+VDD + W  DE +LL  LD +L RL   G+FAAA+
Sbjct:  468 DYLRANLQCEKVPIVVPSQEVQVSMLQGATCFGKLDLLQGYWQMPLAESAREIFSIATPEGLFEPTRVPQDVLNATGYFQAVMTEILQGLN---CAVWVDDDIWWGIDETDLLNTLDEILWRLQDNGIFAAAH 597          
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 127 bits (320), Expect = 1.660e-31
Identity = 63/133 (47.37%), Postives = 87/133 (65.41%), Query Frame = 0
Query:    4 DYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRLDLVLERLMAVGLFAAAY 136
            D+RA N Q+E+ P P P+LE   Q+      + +LD+LQGYW  PLA +AQE+F ++   GL++P RVPQGV+N T+Y+Q  M ++L  L    C+V+VDD V W E E +LL  LDL+L R    GLF AA+
Sbjct:  717 DFRAVNRQIEKSPGPMPDLEADMQRLSRATCYGSLDMLQGYWGMPLAPEAQEIFTMIGPGGLYSPERVPQGVLNATSYYQGTMNSILHDLN---CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAH 846          
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A6H5JCK9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCK9_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.410e-28
Identity = 64/131 (48.85%), Postives = 85/131 (64.89%), Query Frame = 0
Query:    1 MVIDYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRLDLVLERLMAVGL 131
            ++ D+RAAN QVE+VP   PN E    QF   K   +LDLL+ Y Q PL+ +AQ++F I T RGL TP RVPQG++N T+YFQ  +  +LEGL    CLV+VD  V    +E +LL  LD+++ERL   GL
Sbjct:  593 LLSDFRAANNQVEKVPGVMPNPEASMAQFSATKFHGSLDLLRAYCQRPLSPEAQKIFTIATPRGLHTPKRVPQGILNATSYFQATLSRILEGLN---CLVWVDGVVNRGMEEDDLLNTLDMIVERLDGAGL 720          
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A2P4YLW7_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YLW7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 9.560e-26
Identity = 52/128 (40.62%), Postives = 79/128 (61.72%), Query Frame = 0
Query:    3 IDYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRLDLVLERLMAVG 130
            +DYR  NA  E +    P++E   +   G K +   D L+G+WQ PL E+++E    +TD+G+FTPTRVPQG  +   +FQ M+  VL  LVG C +V++DD +++AE + ELL  +D VL++    G
Sbjct:   52 VDYRPTNAMTEPIAGVMPSIEVALEHCRGKKYYALFDFLKGFWQLPLHENSREYLSYMTDKGVFTPTRVPQGSTDAALHFQSMVQMVLGELVGKCVIVWIDDLLVFAETQSELLDVIDAVLQKFDEYG 179          
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A6A4G9J9_9STRA (Reverse transcriptase domain-containing protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G9J9_9STRA)

HSP 1 Score: 109 bits (272), Expect = 4.610e-25
Identity = 54/131 (41.22%), Postives = 74/131 (56.49%), Query Frame = 0
Query:    1 MVIDYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRLDLVLERLMAVGL 131
            +  DYR  N     + A  PNL  +  +  G +A    D+ +G+WQ PLAED+QE+F I TD G++TPTRVPQG V++  +FQ  +  V   ++ H  LVYVDD VL+A    E L  L+    RL    L
Sbjct:  659 LTTDYRPVNRMTVPIAAAVPNLAVVTGRVRGAQAMAKFDMFKGFWQLPLAEDSQEIFSIKTDEGVYTPTRVPQGAVDSAMHFQSTLQEVFGDMMNHNLLVYVDDVVLYAPTHDEFLVVLEKFFRRLRESNL 789          
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A6A3FJ70_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3FJ70_9STRA)

HSP 1 Score: 108 bits (270), Expect = 8.770e-25
Identity = 54/131 (41.22%), Postives = 73/131 (55.73%), Query Frame = 0
Query:    1 MVIDYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRLDLVLERLMAVGL 131
            +  DYR  N     + A  PNL  +  +  G +A    D+ +G+WQ PL ED+QE+F I TD G++TPTRVPQG V++  +FQ  M  V   ++ H  LVYVDD VL+A    E L  L+    RL    L
Sbjct:  147 LTTDYRPVNRMTVPIAAAVPNLVVVTSRVRGAQAMAKFDMFKGFWQLPLDEDSQEIFSIKTDEGVYTPTRVPQGAVDSAMHFQSTMQEVFGDMMNHNLLVYVDDVVLYAPTHDEFLVVLEKFFRRLRESNL 277          
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A2P4YJ51_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJ51_9STRA)

HSP 1 Score: 106 bits (265), Expect = 4.100e-24
Identity = 50/128 (39.06%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    3 IDYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRLDLVLERLMAVG 130
            +DYR  NA  E +    P++E   +   G K +   D L+G+WQ P  E+++E    +T++G+FTPTRVPQG  +   +FQ  +  VL  LVG C +V++DD +++AE + ELL  +D VL++L   G
Sbjct:  249 VDYRPINAITEPIAGVMPSIEVALEHCRGKKYYALFDFLKGFWQLPFHENSREYLSYMTNKGVFTPTRVPQGSTDADLHFQSTVQMVLRELVGKCVIVWIDDLLVFAETQSELLDAIDAVLQKLDEYG 376          
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A2P4XIX6_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XIX6_9STRA)

HSP 1 Score: 105 bits (263), Expect = 7.530e-24
Identity = 48/124 (38.71%), Postives = 75/124 (60.48%), Query Frame = 0
Query:    3 IDYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRLDLVLERL 126
            +DYR ANA  E +    P++E   +   G   +   D L+G+WQ PL E  +E    +TD+G+FTPTRVPQG  +   +FQ  +  VL  LVG C +V++DD +++AE   +L+  +D +L++L
Sbjct:  590 VDYRPANALTEPIAGVMPSIEVALEHCRGKAFYALFDFLKGFWQLPLHESCREFLSYMTDKGVFTPTRVPQGSTDAALHFQSTVEMVLGDLVGKCVIVWIDDLLVFAESADQLVESIDAILQKL 713          
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Match: A0A6G0RPS6_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RPS6_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.720e-23
Identity = 49/119 (41.18%), Postives = 70/119 (58.82%), Query Frame = 0
Query:    1 MVIDYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLAEDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLVYVDDGVLWAEDEGELLRRL 119
            M +DYR  N     + A TPNL  + Q   G   F   +LL+G+WQ PL+  +QELF  +T+ G+FTPTRVPQG  ++  +FQ  M      L+ +  LV++DD +L+A   GE L +L
Sbjct:    1 MTVDYRPVNQLTVPLAAATPNLAVVTQSVKGAYGFGPFNLLKGFWQLPLSPASQELFSFLTEDGVFTPTRVPQGASDSALHFQAQMQECFRSLLYNAALVWIDDILLFARSPGEFLEKL 119          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26924.7366.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K5A5_9PHAE9.280e-3752.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L028_9PHAE5.430e-3351.88CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L7F6_9PHAE1.660e-3147.37Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JCK9_9PHAE1.410e-2848.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4YLW7_9STRA9.560e-2640.63Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A6A4G9J9_9STRA4.610e-2541.22Reverse transcriptase domain-containing protein n=... [more]
A0A6A3FJ70_9STRA8.770e-2541.22Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A2P4YJ51_9STRA4.100e-2439.06Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A2P4XIX6_9STRA7.530e-2438.71Reverse transcriptase domain-containing protein n=... [more]
A0A6G0RPS6_9STRA1.720e-2341.18Reverse transcriptase domain-containing protein n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000477Reverse transcriptase domainPFAMPF00078RVT_1coord: 9..131
e-value: 2.6E-10
score: 40.2
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..136
score: 11.192
NoneNo IPR availableGENE3D3.10.10.10coord: 1..76
e-value: 1.1E-30
score: 108.6
NoneNo IPR availableGENE3D3.30.70.270coord: 14..133
e-value: 1.1E-30
score: 108.6
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 1..131
NoneNo IPR availablePANTHERPTHR24559:SF269coord: 1..131
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26924contigH-paniculata_contig26924:1605..2015 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26924.7366.1mRNA_H-paniculata_contig26924.7366.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26924 1605..2018 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26924.7366.1 ID=prot_H-paniculata_contig26924.7366.1|Name=mRNA_H-paniculata_contig26924.7366.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
MVIDYRAANAQVEQVPAPTPNLEHIAQQFVGVKAFCTLDLLQGYWQCPLA
EDAQELFKIVTDRGLFTPTRVPQGVVNTTAYFQEMMGTVLEGLVGHCCLV
YVDDGVLWAEDEGELLRRLDLVLERLMAVGLFAAAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom