mRNA_H-paniculata_contig26874.7351.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 147 bits (372), Expect = 1.220e-40 Identity = 72/153 (47.06%), Postives = 94/153 (61.44%), Query Frame = 1
Query: 10 NTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSHIPKGMFICAVSRPDPENDFDGNIGIWPVCTVREAQRA-------TARRARG----------------DMYEVDVTIDAEWYWEWYVNEILPEAK-KMRWLKGEEVIMQPDSARPH 396
N +H+DE+WFYL+REKE VR+F GE+ G RV H+SH+PK M I A +RPDP +DFDG IGIW +C + AQR+ TA R + YE D TIDAEWY +WY++ +LP K KM WL+ + V++Q D A PH
Sbjct: 153 NVVHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPH 305
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: A0A5D6XR23_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XR23_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.230e-18 Identity = 49/136 (36.03%), Postives = 72/136 (52.94%), Query Frame = 1
Query: 7 FNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSHIPKGMFICAVSRP--DPEN--DFDGNIGIWPVCTVREAQRATARRARGDMYEVDVTIDAEWYWEWYVNEILPEAKKMRWLK--GEEVIMQPDSARPH 396
F+ +HIDE WF + + K V + P E QHKSH+PK MF+CA++RP DP FD IGIWP A R+++ R G + + + E Y + E++P A +W G +++Q D+A PH
Sbjct: 25 FDRVHIDEKWFVVNKTKRRVYLTPTEPNPQR-HAQHKSHLPKLMFLCAITRPRVDPATGASFDRGIGIWPFAEEIPAYRSSSNRQAGTLETKPLPANKETYKAMIMTEVVP-AVVSKWPAWGGRHIVLQRDNANPH 158
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: I6THG9_PSEMU (Tranposase n=1 Tax=Pseudo-nitzschia multiseries TaxID=37319 RepID=I6THG9_PSEMU) HSP 1 Score: 86.3 bits (212), Expect = 4.150e-17 Identity = 50/138 (36.23%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 7 FNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSHIPKGMFICAVSRPDPEND----FDGNIGIWPVCTVREAQRATARRARGDMYEVDV-TIDAEWYWEWYVNEILPEAKK---MRWLKGEEVIMQPDSARPH 396
++TIHIDE WFYL + + GE + S + K I K MF+CAV+RP + D FDG IGIWP AQR + R RG M ++ +++A Y + + ++LP ++ + W K + +Q D+A+PH
Sbjct: 230 YDTIHIDEKWFYLKTTNQKTYLCSGEPEPHST-CKSKRFIEKVMFLCAVARPRHDADRNAGFDGKIGIWPFVVKEPAQRNSVNRPRGTMVTKNIPSVNAAEYQKMMLEKVLPAIQEKFPVCW-KSRPIFIQEDNAKPH 365
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: A0A485LIJ5_9STRA (Aste57867_21562 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LIJ5_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 6.490e-17 Identity = 46/136 (33.82%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 7 FNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSHIPKGMFICAVSRPDPEND----FDGNIGIWPVCTVREAQRATARRARGDMYEVDVTIDAEWYWEWYVNEILPEAKKMRWLKGE--EVIMQPDSARPH 396
++T+H+DE WF++ K+ V PGE K+ + K H+ K MF+ AV+RP +N+ FDG IG W A+R + RR G V++D Y +++++P A + +W +G+ + +Q D+ARPH
Sbjct: 2 YDTVHVDEKWFFMSWIKKTVYGAPGE-KIKQPTCKFKQHLLKIMFLSAVARPRLDNETNELFDGKIGTWHFTETVLAKRRSCRRDAGTPIMKSVSVDRTTYKAMLIDKVIP-AIRDKWPRGDMKNIKIQQDNARPH 135
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: A0A6A5A6A6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A6A6_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 6.160e-16 Identity = 45/136 (33.09%), Postives = 76/136 (55.88%), Query Frame = 1
Query: 7 FNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSHIPKGMFICAVSRPDPEND----FDGNIGIWPVCTVREAQRATARRARGDMYEVDVTIDAEWYWEWYVNEILP--EAKKMRWLKGEEVIMQPDSARPH 396
+ T+H+DE WF+L K+ V ++ EE V ++ K I K MF+ AV+RP +++ F G IG+WP AQR + R +G + V + AE Y +++++P +AK + ++G + +Q D+A PH
Sbjct: 65 YQTVHVDEKWFFLTTAKKRVYVYADEE-VALRALKSKRFITKVMFLAAVARPRFDHNKGSMFSGKIGVWPFVEQVVAQRNSRNRPKGTVLLVPQAVTAEVYRTMILDKVVPAIQAKMPQRVQGSLIYLQQDNASPH 199
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: UPI000D0E11B9 (uncharacterized protein LOC100837505 n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=UPI000D0E11B9) HSP 1 Score: 82.4 bits (202), Expect = 1.010e-15 Identity = 52/138 (37.68%), Postives = 79/138 (57.25%), Query Frame = 1
Query: 7 FNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSHIPKGMFICAVSRP--DPEND--FDGNIGIWPVCTVREAQRATARRARGDMY-EVDVTIDAEWYWEWYVNEILPEAKKMRWL---KGEEVIMQPDSARPH 396
+NTI+IDE WFY R K + + E+ Q K I K MF+ AV+RP D E + FDG IGI+P T + A+R++ R +G M +V T+ E ++ VN++LP K+ +W +G +I+Q D+A+ H
Sbjct: 452 YNTIYIDEKWFY--RTKRTQKFYLANEEDPLRTTQSKHFIEKVMFLAAVARPRFDAEKNITFDGKIGIFPFVTEKPAERSSVNRPKGTMETKVLPTVTKEVSRDYLVNKVLPAIKE-KWPEEDRGRPIIIQQDNAKTH 586
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: A0A1R3I5M9_9ROSI (Uncharacterized protein n=1 Tax=Corchorus olitorius TaxID=93759 RepID=A0A1R3I5M9_9ROSI) HSP 1 Score: 82.0 bits (201), Expect = 1.160e-15 Identity = 47/138 (34.06%), Postives = 80/138 (57.97%), Query Frame = 1
Query: 7 FNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSHIPKGMFICAVSRP--DPEND--FDGNIGIWPVCTVREAQRATARRARGDMYEVDVT-IDAEWYWEWYVNEILPEAKKMRWLKGE---EVIMQPDSARPH 396
++TIHIDE WFYLIR+ N + P EE+ + K+ IPK MF+ AV+RP D + F G IG++P+ T A+R++ R G + +T ++ + + +N+++P ++ +W + + +Q D+ARPH
Sbjct: 170 YDTIHIDEKWFYLIRKSVNYYLLPDEEEPHRT-CKSKNFIPKVMFLAAVARPRFDTAGNVLFSGKIGVFPLVTKEPAKRSSVNRHAGTLETKPITTVNKDVMKTFLINKVIPTIRE-KWPRDNMRSPIYIQQDNARPH 305
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: UPI00052FDC9E (uncharacterized protein LOC100833420 n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=UPI00052FDC9E) HSP 1 Score: 80.9 bits (198), Expect = 1.610e-15 Identity = 51/139 (36.69%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 7 FNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSH-IPKGMFICAVSRP--DPEND--FDGNIGIWPVCTVREAQRATARRARGDMY-EVDVTIDAEWYWEWYVNEILPEAKKMRWL---KGEEVIMQPDSARPH 396
+NTI+IDE WFY R K + + ++ +R H I K MF+ AV+RP D E + FDG IGI+P T + A+R++ R +G M +V T+ E ++ VN++LP K+ +W +G +I+Q D+A+ H
Sbjct: 79 YNTIYIDEKWFY--RTKGTQKFYLANDEEDPLRTTQSKHFIEKVMFLAAVARPRFDVEKNITFDGKIGIFPFVTEKPAERSSVNRPKGTMETKVLPTVTKEVSRDYLVNKVLPAIKE-KWPEEDRGRPIIIQQDNAKTH 214
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: A0A485L7X2_9STRA (Aste57867_17524 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7X2_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 4.880e-15 Identity = 46/136 (33.82%), Postives = 73/136 (53.68%), Query Frame = 1
Query: 7 FNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSHIPKGMFICAVSRPD----PENDFDGNIGIWPVCTVREAQRATARRARGDMYEVDVTIDAEWYWEWYVNEILPEAKKMRWLKGE--EVIMQPDSARPH 396
++T+H+DE WF++ R ++ V PGE K+ + K H+ K MF+ AV+RP + FDG +G W + AQR + RR G + V + + Y V+ ++P A + +W E V +Q D+ARPH
Sbjct: 167 YDTVHVDEKWFFMTRLQKKVYGAPGE-KIKQRSCKSKRHLLKVMFLSAVARPRWDEAKQEWFDGKVGTWHFTEIVPAQRRSRRRDAGTLVMKTVPVTRDAYRAMLVDNVIP-AIRSKWPADETKRVKIQQDNARPH 300
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Match: A0A1U8HCR4_CAPAN (uncharacterized protein LOC107876564 n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A1U8HCR4_CAPAN) HSP 1 Score: 79.3 bits (194), Expect = 7.750e-15 Identity = 47/139 (33.81%), Postives = 80/139 (57.55%), Query Frame = 1
Query: 7 FNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRV-QHKSHIPKGMFICAVSRP---DPEND-FDGNIGIWPVCTVREAQRATARRARGDMYEVDVT-IDAEWYWEWYVNEILPEAKKMRWLKGEE---VIMQPDSARPH 396
+NT+HIDE WFY+ R+ + + P EK +R + K++I K MF+ A +RP EN+ F G IGI+P T + A+R + R + ++ I+ + + + +I+P+ KK+ WLK + + +Q D+A+PH
Sbjct: 98 YNTVHIDEKWFYMTRKCQRYYLLP--EKEDPVRTCKSKNYIEKVMFLVATARPRFDSRENELFSGKIGIYPFITQQAAKRDSVNRVASTLETKSISSINRDVMRSFLIEKIIPDIKKI-WLKEDSCYLIFIQQDNAKPH 233 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26874.7351.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26874.7351.1 >prot_H-paniculata_contig26874.7351.1 ID=prot_H-paniculata_contig26874.7351.1|Name=mRNA_H-paniculata_contig26874.7351.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp IGFNTIHIDEAWFYLIREKENVRMFPGEEKVGSIRVQHKSHIPKGMFICAback to top mRNA from alignment at H-paniculata_contig26874:2900..3295- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26874.7351.1 ID=mRNA_H-paniculata_contig26874.7351.1|Name=mRNA_H-paniculata_contig26874.7351.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=396bp|location=Sequence derived from alignment at H-paniculata_contig26874:2900..3295- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26874:2900..3295- >mRNA_H-paniculata_contig26874.7351.1 ID=mRNA_H-paniculata_contig26874.7351.1|Name=mRNA_H-paniculata_contig26874.7351.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=792bp|location=Sequence derived from alignment at H-paniculata_contig26874:2900..3295- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |