prot_H-paniculata_contig2686.7347.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2686.7347.1
Unique Nameprot_H-paniculata_contig2686.7347.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length195
Homology
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: D7G8W1_ECTSI (tRNA-binding domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W1_ECTSI)

HSP 1 Score: 253 bits (646), Expect = 8.860e-84
Identity = 134/144 (93.06%), Postives = 138/144 (95.83%), Query Frame = 0
Query:   51 MAVSHAAAEEISNVEDVPLLKDPVSVGDFENLDIRVGRIVLAELVPDPDHDNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSASNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 194
            MAVSHAAAEEISN+EDVP LKDPV++ DFE LDIRVGRIVLAEL+PDPDH NKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANV EETILGLPSRGKLLS SNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL
Sbjct:    3 MAVSHAAAEEISNMEDVPKLKDPVAIADFEALDIRVGRIVLAELIPDPDHGNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVEEETILGLPSRGKLLSGSNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 146          
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: A0A836CNH0_9STRA (tRNA-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH0_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.130e-56
Identity = 103/156 (66.03%), Postives = 122/156 (78.21%), Query Frame = 0
Query:   42 RANAVVP---QKMAVSHAAAEEISNVEDVPLLKDPVSVGDFENLDIRVGRIVLAELVPDPDHDNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSASNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL 194
            R++AV P   +++AVS A  EE ++  DVP L+  VSV  +E LDIRVGRIV AE VPDPDH NKPSRKYLSLVV LGNE R ++S VR + DVE+AIGK+VL+ AN  EE ILG PSRG+LL A+N+SK PMPRTLRTVLLGGG VPPGS V+GL
Sbjct:    4 RSHAVRPLHHREVAVSTALGEEATDSADVPALQPDVSVASYEALDIRVGRIVKAETVPDPDHGNKPSRKYLSLVVALGNEFRSIISGVRPVFDVEEAIGKSVLVVANTEEEVILGRPSRGRLLVAANYSKAPMPRTLRTVLLGGGPVPPGSQVTGL 159          
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: A0A7S0MGA1_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MGA1_9CRYP)

HSP 1 Score: 155 bits (391), Expect = 3.100e-44
Identity = 81/145 (55.86%), Postives = 112/145 (77.24%), Query Frame = 0
Query:   50 KMAVSHAAAEEISNVE--DVPLLKDPVSVGDFENLDIRVGRIVLAELVPDPDHDNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSASNFSKEPMPRTLRTVLLGGGGVPPGSAVS 192
            +MA    A +E  N++  D+P +KD VS    ++LDIRVGRI  A+L+PDP+H+ KPSRKYL L+V++G EKR +V+A R I DVE++IG++VL+A NV ++T+LG+ S G+LLSASN ++ P+PRTLRTVL  GGG+PPGS VS
Sbjct:   60 RMAFVKGAVDEEDNLDPSDIPPVKDEVSNALLDSLDIRVGRIERADLIPDPEHEMKPSRKYLRLIVNIGTEKRTIVAASRGIYDVEESIGRSVLVACNVEQQTVLGVASHGRLLSASNPTRRPIPRTLRTVLSKGGGLPPGSPVS 204          
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: A0A2K1L6P8_PHYPA (tRNA-binding domain-containing protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6P8_PHYPA)

HSP 1 Score: 97.4 bits (241), Expect = 1.310e-21
Identity = 60/148 (40.54%), Postives = 86/148 (58.11%), Query Frame = 0
Query:   54 SHAAAEEISNVED---VPLLKDPVSVGDFENLDIRVGRIVLAELVPDPDHD---NKP--SRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSASNFSKEPMPRTLRTVLLGGGGVPPGSAVSG 193
            +H    E+    D    P +K  V    FE++D+RVG I  A+ V D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VL+ ANV    + G+ S G +L+  N+   PMPR+ + +L G G +PPGS V G
Sbjct:   72 AHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGSQVKG 219          
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: A9TWI9_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9TWI9_PHYPA)

HSP 1 Score: 94.4 bits (233), Expect = 1.850e-20
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = 0
Query:   54 SHAAAEEISNVED---VPLLKDPVSVGDFENLDIRVGRIVLAELVPDPDHD---NKP--SRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSASNFSKEPMPRTLRTVLLGGGGVPPGS 189
            +H    E+    D    P +K  V    FE++D+RVG I  A+ V D +      KP  SRK+L L VD+G E+R +VS  + ++DVEDA+GK VL+ ANV    + G+ S G +L+  N+   PMPR+ + +L G G +PPGS
Sbjct:   44 AHTETAEVPETTDRVACPAVKPEVDPSIFESVDVRVGLITDAKPVQDAEMTAKRGKPTLSRKFLQLTVDIGCEQRTIVSECKYVMDVEDAVGKKVLIVANVPPTEVNGIKSHGVVLTGFNYDPTPMPRSFKVILPGLGRLPPGS 187          
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: UPI001AE5ECDA (methionine--tRNA ligase n=1 Tax=Methanolinea mesophila TaxID=547055 RepID=UPI001AE5ECDA)

HSP 1 Score: 75.9 bits (185), Expect = 1.300e-12
Identity = 41/104 (39.42%), Postives = 65/104 (62.50%), Query Frame = 0
Query:   72 DPVSVGDFENLDIRVGRIVLAELVPDPDHDNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSASNFSKEPMPRTL 175
            + +S+ DF  +DIR+G+I+ AE +P        S+K L L+VDLG EKR++VS +      ED +G+ V + AN+A  TI G+ SRG +L+A + +   +P T+
Sbjct:  559 EEISIEDFCRMDIRIGKILKAEPIP-------KSKKLLRLIVDLGQEKRQIVSGIAQFYTPEDLVGQQVAVLANLAPATIFGVESRGMILAAGDTASLLVPLTV 655          
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: A0A1G8X7N8_9EURY (Methionine--tRNA ligase n=1 Tax=Methanoculleus thermophilus TaxID=2200 RepID=A0A1G8X7N8_9EURY)

HSP 1 Score: 75.1 bits (183), Expect = 2.390e-12
Identity = 45/108 (41.67%), Postives = 64/108 (59.26%), Query Frame = 0
Query:   59 EEISNVEDVPLLKDP-VSVGDFENLDIRVGRIVLAELVPDPDHDNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSASN 165
            E +   ++    K P VS+ +F  LDIRVG+IV AE +       K S+K   L+VDLG+EKR+VVS +      E+ +GK V M AN+A   I G+ SRG +L+A +
Sbjct:  546 ERVEKAKEAAKPKTPTVSIDEFAKLDIRVGQIVSAEPI-------KGSKKLYKLIVDLGSEKRQVVSGIAQFYSPEELVGKDVAMIANLAPAKIFGVESRGMILAAGD 646          
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: L0AB28_CALLD (Protein containing C-terminal region/beta chain of methionyl-tRNA synthetase n=2 Tax=Caldisphaera lagunensis TaxID=200415 RepID=L0AB28_CALLD)

HSP 1 Score: 69.3 bits (168), Expect = 5.900e-12
Identity = 34/95 (35.79%), Postives = 63/95 (66.32%), Query Frame = 0
Query:   69 LLKDPVSVGDFENLDIRVGRIVLAELVPDPDHDNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSA 163
            +L++ +   +F  +D+RVG+++ AELVP+       SRK + L+VDLG E+R++++ ++     ED +GK V++ AN+  + + GL S+G +L+A
Sbjct:    3 ILEEKIDYSEFSKIDLRVGKVISAELVPN-------SRKLIKLIVDLGTEQRQILAGLQKWYKPEDFVGKFVVVVANLKSKIMGGLESQGMILAA 90          
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: A0A1F8JXF2_9BACT (Methionine--tRNA ligase n=1 Tax=Chlamydiae bacterium RIFCSPLOWO2_01_FULL_28_7 TaxID=1797606 RepID=A0A1F8JXF2_9BACT)

HSP 1 Score: 73.6 bits (179), Expect = 8.160e-12
Identity = 39/103 (37.86%), Postives = 63/103 (61.17%), Query Frame = 0
Query:   63 NVEDVPLLKDPVSVGDFENLDIRVGRIVLAELVPDPDHDNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSASN 165
            N++    LK+ ++  DF  LD+RVG+I+ AE V       + S K L + VD+G EKR++VS++      ED IGK V++ AN+    ++G+ S+G +L+A N
Sbjct:  559 NLKSFEKLKEEITYEDFSKLDLRVGKIISAEKV-------EKSNKLLKITVDIGFEKRQIVSSIAKTFKPEDLIGKKVIIVANLKTAKLMGIDSQGMILAAGN 654          
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Match: A0A2I0NLL2_9EURY (Methionine--tRNA ligase subunit beta (Fragment) n=1 Tax=Methanomicrobiales archaeon HGW-Methanomicrobiales-6 TaxID=2013822 RepID=A0A2I0NLL2_9EURY)

HSP 1 Score: 71.6 bits (174), Expect = 1.640e-11
Identity = 40/92 (43.48%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   74 VSVGDFENLDIRVGRIVLAELVPDPDHDNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEETILGLPSRGKLLSASN 165
            +S+ +F NLDIRV ++V AE +       K S+K   LVVDLG EKR+VVS +      +D +GK V + AN+A   I G+ SRG +L+A +
Sbjct:  188 ISIEEFANLDIRVAKVVSAEPI-------KGSKKLYKLVVDLGGEKRQVVSGIAQFYTPDDLVGKDVALIANLAPARIFGVESRGMILAAGD 272          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2686.7347.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W1_ECTSI8.860e-8493.06tRNA-binding domain-containing protein n=2 Tax=Ect... [more]
A0A836CNH0_9STRA1.130e-5666.03tRNA-binding domain-containing protein n=1 Tax=Tri... [more]
A0A7S0MGA1_9CRYP3.100e-4455.86Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A2K1L6P8_PHYPA1.310e-2140.54tRNA-binding domain-containing protein n=1 Tax=Phy... [more]
A9TWI9_PHYPA1.850e-2040.28Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
UPI001AE5ECDA1.300e-1239.42methionine--tRNA ligase n=1 Tax=Methanolinea mesop... [more]
A0A1G8X7N8_9EURY2.390e-1241.67Methionine--tRNA ligase n=1 Tax=Methanoculleus the... [more]
L0AB28_CALLD5.900e-1235.79Protein containing C-terminal region/beta chain of... [more]
A0A1F8JXF2_9BACT8.160e-1237.86Methionine--tRNA ligase n=1 Tax=Chlamydiae bacteri... [more]
A0A2I0NLL2_9EURY1.640e-1143.48Methionine--tRNA ligase subunit beta (Fragment) n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002547tRNA-binding domainPFAMPF01588tRNA_bindcoord: 84..167
e-value: 1.9E-7
score: 31.1
IPR002547tRNA-binding domainPROSITEPS50886TRBDcoord: 78..192
score: 18.107
NoneNo IPR availableGENE3D2.40.50.140coord: 69..190
e-value: 3.3E-20
score: 74.0
NoneNo IPR availablePANTHERPTHR11586FAMILY NOT NAMEDcoord: 66..191
NoneNo IPR availablePANTHERPTHR11586:SF35coord: 66..191
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..194
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..17
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.505
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 74..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2686contigH-paniculata_contig2686:12441..19118 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2686.7347.1mRNA_H-paniculata_contig2686.7347.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2686 12418..19750 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2686.7347.1 ID=prot_H-paniculata_contig2686.7347.1|Name=mRNA_H-paniculata_contig2686.7347.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp
MKPFSSIAAALLAGSSCEAFFVSPSPMRPAVARAISVATTVRANAVVPQK
MAVSHAAAEEISNVEDVPLLKDPVSVGDFENLDIRVGRIVLAELVPDPDH
DNKPSRKYLSLVVDLGNEKRRVVSAVRSIVDVEDAIGKAVLMAANVAEET
ILGLPSRGKLLSASNFSKEPMPRTLRTVLLGGGGVPPGSAVSGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002547tRNA-bd_dom
IPR012340NA-bd_OB-fold