mRNA_H-paniculata_contig2686.7346.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: A0A6H5KMN8_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN8_9PHAE) HSP 1 Score: 266 bits (680), Expect = 2.550e-77 Identity = 185/435 (42.53%), Postives = 232/435 (53.33%), Query Frame = 2
Query: 206 WQGHLEHVLQLCRNSATTAADPSGSDLIYPPSGFESNPRHQQFLAALACTAAETKIVERTDSASNLETISAVSTETGSGIHPENDVGTTAEPSPEIAMISPPPPCRSDHLDNSARASASTDVDIVGK---VLILFDMNGTLLYRAKRPLQLP--------AGQNNPPEPAFTHGDPDPFQYFMRPGARELIKSIARHPRTRMAFYTSMRGVNALPAALFLMPGDCSSEKEPEIYDRPFNAHDLDGTNHWDTKRDLPKIWSTGGRAGAGFDVHNTVMVDDTPRKMRDMSAGLVVVPEYKEACVLAACGM---AAEVEDERAARQAE-REQADILPRLTEYLLRLL----DSDGGDVRPFIESNPFRPHASA-LDTQLDTVEAELPALKARTIPDSADSAPVPTSCVPGGEEGPWRSKDAVFSLLDAVYLLLSTGPL 1450
W+ +L + LC + A+ A P +DLI PP+ ++P+ Q+ ++A T +E ++A G G G T S + P R H D+D+ K VLIL DMNGTLL RAK+PL++ + PAF HG+ P Y+MRPGA EL+ ++ HPR R+AFYTSMRGVNALPAA FLMP D S+ PE+YDRPFNA D G N WDT RDLP IWST GR GAGF NT+MVDDTPRKMR M AGLVVVPE+ EAC L A G E E+E R+A R Q ++LPRL +YL RLL D G DVRPFIE NPF+P S+ L T+ + + + +S S P S L AV L+L+TGPL
Sbjct: 58 WREYLNRIAGLC-DDASNAEGPPAADLIRPPNNLLAHPQRQRGPGSIANT---------------VEPLAADCPAIGCG-------GVTNHSSDSNGAVPP----RDGH-----------DMDVPSKHKQVLILLDMNGTLLRRAKKPLRVSNDGXXXXXXXNSTWGAPAFVHGENVPLHYYMRPGAAELVAALEAHPRARLAFYTSMRGVNALPAARFLMPDDSSAA--PEVYDRPFNARDPHGANAWDTTRDLPLIWSTPGRTGAGFGPGNTIMVDDTPRKMRFMDAGLVVVPEFTEACALEALGGETGGVESEEEAERREAAARAQREVLPRLLDYLRRLLRRLLDESGEDVRPFIERNPFQPRPSSWLCTEKEEEQQD----------ESVASPPT------------------TLSFLQAVELVLTTGPL 424
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: A0A7S2RHV1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHV1_9STRA) HSP 1 Score: 159 bits (401), Expect = 1.890e-38 Identity = 96/219 (43.84%), Postives = 117/219 (53.42%), Query Frame = 2
Query: 587 VLILFDMNGTLLYRAKRPLQLPAGQNNPPEPAFTHGDPDPFQYFMRPGARELIKSIARHPRTRMAFYTSMRGVNALPAALFLMPGDCSSEKEPEIYDRPFNAHDL--DGTNHWDTKRDLPKIWSTGGRAGAGFDVHNTVMVDDTPRKMRDMSAGLVVVPEYKEACVLAACGMAAEVEDERAARQAEREQADILPRLTEYLLRLLDSDGGDVRPFIESNP 1237
+LIL DMNGTLL R K L A P F H YF+R G ++L++++ HPR R+AFYTSMR NALPA + G +IYDR FN D DG HWDT RDL ++WST + G GF HNTVMVDDTPRKMR V VPE K +A+R + +P L +YL+ LLD G DVR +I NP
Sbjct: 222 ILILLDMNGTLLIRLKGGLGKQA-------PDFAHAG---LNYFIRRGTKQLVRTLLAHPRARVAFYTSMRESNALPAVKRITDG-----VRVDIYDREFNVADRGHDGAKHWDTMRDLERVWSTVDKVGNGFSWHNTVMVDDTPRKMRHSPQNAVFVPELKS--------------------EADRND-NTIPELEQYLVELLDQSGDDVRHYITDNP 404
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: A0A7S2CI38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CI38_9STRA) HSP 1 Score: 153 bits (386), Expect = 3.340e-37 Identity = 96/221 (43.44%), Postives = 115/221 (52.04%), Query Frame = 2
Query: 581 GKVLILFDMNGTLLYRAKRPLQLPAGQNNPPEPAFTHGDPDPFQYFMRPGARELIKSIARHPRTRMAFYTSMRGVNALPAALFLMPGDCSSEKEPEIYDRPFNAHD-LDGTNHWDTKRDLPKIWSTGGRAGAGFDVHNTVMVDDTPRKMRDMSAGLVVVPEYKEACVLAACGMAAEVEDERAARQAEREQADILPRLTEYLLRLLDSDGGDVRPFIESNPF 1240
G +LIL DMNGTLL R K L AG P TH Y+ R G +L+ + HPR +AFYTSMR NALPA L + G K EIYDR FN D DG WDT RD+ KIW+T GRAG GF+ NTVMVDD+ RKMR LV++PE+K + E + + RL+ YL LL G DVRP + S F
Sbjct: 162 GPILILLDMNGTLLLRLKGKL---AGLR----PDLTHAG---LNYYFRAGVCDLVSMLLDHPRVVLAFYTSMRESNALPAVLQISGG----RKRVEIYDRDFNKKDEWDGAKDWDTVRDMHKIWTTKGRAGYGFNARNTVMVDDSSRKMRQFPGNLVLIPEFK---------------------RQEHYKDGTMDRLSTYLSSLLSQTGDDVRPLLASEKF 347
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: A0A7S3K1S4_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1S4_9STRA) HSP 1 Score: 128 bits (322), Expect = 5.100e-28 Identity = 82/227 (36.12%), Postives = 112/227 (49.34%), Query Frame = 2
Query: 584 KVLILFDMNGTLLYRAKRPLQLPAGQNNPPEPAFTHGDPDPFQYFMRPGARELIKSIARHPRTRMAFYTSMRGVNALPAALFLMPGDCSSEKEPEIYDRPFNAHDLDGTNHWDTKRDLPKIWSTGGRAGAGFDVHNTVMVDDTPRKMRDMSAGLVVVPEYKEACVLAACGMAAEVEDERAARQAEREQADILPRLTEYLLRLLDSDGGDVRPFIESNPFRPHASALD 1264
K+L+L DMNGTLL R KR L E T D Y++R A + + + HP AFYTSMR +A PA L P +Y+R FN D N WDT RDL K+WST R GF+ NT+++DDTPRKMR+ ++VVP + E V A+ D+LP+L Y+ +L ++ D+R +I + F P AL+
Sbjct: 143 KILVLLDMNGTLLVRTKRRLDYR-------EADCTLND---NYYYIRENAIQFCQQLESHPAIIYAFYTSMRERSAKPATRILAP-------HAHLYERVFNKPDPFAENSWDTMRDLEKLWSTPNRPAYGFNPTNTLVIDDTPRKMREHPHNVIVVPTFTEKAV------------------AQIGSGDVLPQLFNYIDLMLKANLDDIRSYIRDHSFVPQGLALE 334
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: A0A7S1XU20_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU20_9STRA) HSP 1 Score: 120 bits (302), Expect = 4.650e-27 Identity = 75/179 (41.90%), Postives = 96/179 (53.63%), Query Frame = 2
Query: 587 VLILFDMNGTLLYRAKRPLQLPAGQNNPPEPAFTHGDPDPFQYFMRPGARELIKSIARH------------------PRTRMAFYTSMRGVNALPAALFLMPGDCSSEKEPEIYDRPFNAHDLDGTNHWDTKRDLPKIWSTGGRAGAGFDVHNTVMVDDTPRKMRDMSAGLVVVPEYKE 1069
+LIL DMNGTLL+R +R ++P N E F + + Y+MRP A ELI + R PR +M FYTSM+ NA PA L G+ +++ + IY R FN D G N WDT RDL +W+ G+ G GF NT+MVDDTPRKMR M VPE+ E
Sbjct: 23 ILILLDMNGTLLHR-ERGKKVP----NAAEAPFLNNNNT--YYYMRPFAEELIGLLLRAEKGILSAAGEAPAPHPNAPRVQMGFYTSMQQSNAAPAVATLT-GESAAQAKRRIYPRAFNVADPQGKNSWDTHRDLAGVWAAQGKVGFGFSEANTIMVDDTPRKMRHMPRNAFFVPEFNE 193
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: F0XVF5_AURAN (FCP1 homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF5_AURAN) HSP 1 Score: 120 bits (302), Expect = 3.810e-26 Identity = 86/236 (36.44%), Postives = 116/236 (49.15%), Query Frame = 2
Query: 560 STDVDIVGK-VLILFDMNGTLLYRAKRPLQLPAGQNNPPEPAFTHGDPDPFQYFMRPGARELIKSI--ARHP------RTRMAFYTSMRGVNALPAALFLMPGDCSSEKEPEIYDRPFNAHDLDGTNHWDTKRDLPKIWSTGGRAGAGFDVHNTVMVDDTPRKMRDMSAGLVVVPEYKEACVLAACGMAAEVEDERAARQAEREQADILPRLTEYLLRLLDSDGGDVRPFIESNPF 1240
+T +VG +L+L DMNGTL++R+K LP TH Y+ R A +L++ + A P R AFYTSMR NA P A +L G K ++Y+R FN D G N WDT RDLPK+W T +A GFD NT+++DDT RKMR+ + ++VVP Y EA V + D L L Y+ LLD D+R ++ PF
Sbjct: 133 TTKPQLVGNPLLVLCDMNGTLVHRSKT--VLPVSAKAAVVENGTH-------YYARDHAEDLVQFLCDAATPSDPARRRVVFAFYTSMREANAQPIARYLTRG-----KRADMYERKFNKDDASGENAWDTMRDLPKVWGTPAKAAHGFDETNTLVIDDTHRKMREYPSNVLVVPTYDEATV-------------------RKGGDDALEYLAAYIDALLDHPD-DIRTAVDDRPF 334
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: D7G8V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V3_ECTSI) HSP 1 Score: 121 bits (304), Expect = 5.900e-26 Identity = 89/236 (37.71%), Postives = 116/236 (49.15%), Query Frame = 2
Query: 206 WQGHLEHVLQLCRNSATTAADPSGSDLIYPPSGFESNPRHQQFLAALACTAAETKIVERTDSASNLETISAVSTETGSGIHPENDVGTTAEPSPEIAMISPPPPCRSDHLDNSARASASTDVDIVGK-VLILFDMNGTLLYRAKRPLQLP--------AGQNNPPEPAFTHGDPDPFQYFMRPGARELIKSIARHPRTRMAFYTSMRGVNALPAALFLMPGDCSSEKEPEIYDRPF 886
W+ L ++ LC + A P +DLI PP+ ++PR + ++ TA E ++A S G G G T+ S + P R TD+ + K VLIL DMNGTLLYRAK+PL++ + PAF HG+ P Y+MRPGA EL+ ++ HPRTR+AFYTSMRGVNALPAA FLMPGD E RPF
Sbjct: 57 WKEKLNRIVGLCDD-----AGPPVADLIRPPTNLLAHPRRHRGPGSITDTA---------------EPLAADSPAAGCG-------GVTSHSSDSNGAVPP-------------RDGNDTDLPLKTKQVLILLDMNGTLLYRAKKPLRVSNDGXXXXXXXDSKWGAPAFVHGENVPLHYYMRPGAAELVAALEAHPRTRLAFYTSMRGVNALPAARFLMPGDSRLLDESGEDVRPF 252
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: A0A8J2WY59_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY59_9STRA) HSP 1 Score: 117 bits (292), Expect = 5.780e-24 Identity = 85/231 (36.80%), Postives = 118/231 (51.08%), Query Frame = 2
Query: 587 VLILFDMNGTLLYRAKRPLQLPAGQNNPPEPAFTHGDPDPFQYFMRPGARELIKSIARHPRTR--------MAFYTSMRGVNALPAALFLMPGDCSSEKEPEIYDRPFNAHDLDGTNHWDTKRDLPKIWSTGGRAGA-GFDVHNTVMVDDTPRKMRDMSAGLVVVPEYKEACVLAACGMAAEVEDERAARQAEREQADILPRLTEYLLRLLDS---DGGDVRPFIESNPFR 1243
VL+L DMNGTL++R+K L A EPA + + Y+ RPGA++LI+ + RT AFYTSMR NA P A +L G + +IY+R FN D G N +DT RDLP +WS+ A GF NTV++DDT RKMR++ ++VVP ++E V ++ DI+ + YL LLD D DVR +++ P R
Sbjct: 275 VLVLADMNGTLVHRSKTRLTCKA------EPAC---EANKTFYYARPGAKDLIQFLLHAARTTEEGRRRVVFAFYTSMREANARPIADYLTGG-----RRVDIYERKFNKADPTGANDYDTMRDLPSVWSSVKPGSARGFTAENTVVIDDTLRKMRELPHNVLVVPPFEEDAV-------------------KKGTDDIMDYVKVYLDMLLDEEVQDSLDVRETLKARPLR 472
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: A0A7S2D3W3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3W3_9STRA) HSP 1 Score: 105 bits (261), Expect = 7.830e-23 Identity = 60/155 (38.71%), Postives = 83/155 (53.55%), Query Frame = 2
Query: 797 RGVNALPAALFLMPGDCSSEKEPE--IYDRPFNAHDLDGTNHWDTKRDLPKIWSTGGRAGAGFDVHNTVMVDDTPRKMRDMSAGLVVVPEYKEACVLAACGMAAEVEDERAARQAEREQADILPRLTEYLLRLLDSD-----GGDVRPFIESNPF 1240
R NA PA + + G S+ + + IYDR +NA D GT WDT RD+ +IWST G+ G GFD NT+M+DDT RKMR+ ++VVPE+KEA + +++ L+E+L RLLD G DVR ++ NP
Sbjct: 1 RESNAKPAVIKITEGMASAAELDQLTIYDRDYNAEDKSGTKSWDTMRDMHRIWSTPGKIGYGFDAGNTIMIDDTMRKMRNFPDNVIVVPEFKEAV---------------------HRRDNVMSELSEHLSRLLDDQRLGVGGYDVRSYLRENPL 134
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Match: A0A835ZD02_9STRA (PHD-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD02_9STRA) HSP 1 Score: 114 bits (286), Expect = 2.950e-22 Identity = 75/192 (39.06%), Postives = 98/192 (51.04%), Query Frame = 2
Query: 584 KVLILFDMNGTLLYRAKRPLQ-LPAGQNNPPEPAFTH------GDPDPFQYFMRPGARELIKSIARHPRTRMAFYTSMRGVNALPAA----------LFLMPGDCSSEK------------EPEIYDRPFNAHDLDGTNHWDTKRDLPKIWSTGGRAGAGFDVHNTVMVDDTPRKMRDMSAGLVVVPEYKEA 1072
K+L+L DMNGT++YRAK L PA AFTH P Y++RP A EL++ + H R +AFYTSMR NALPA L D +S E IY R +NA D G + W TKRDL ++W+ G+ G GF NT+++DD+ KMR M ++ V EY EA
Sbjct: 16 KILVLLDMNGTIVYRAKAQLGGCPA--------AFTHLVGRDSRTPMRLHYYLRPHAMELVRFLRGHARVTLAFYTSMRLENALPAVEGDDSGNGNGRQLSDTDHASSNSXXXXXXXXXXLEALIYAREYNAPDPLGAHPWSTKRDLARVWTARGKPGHGFGAANTLVIDDSAAKMRHMPHNVLAVEEYTEA 199 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2686.7346.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2686.7346.1 >prot_H-paniculata_contig2686.7346.1 ID=prot_H-paniculata_contig2686.7346.1|Name=mRNA_H-paniculata_contig2686.7346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=621bp MSGQDAIPTSHNGAAARRQGQLTAQEHANDTQQQQQLQSLISLSTFSPSLback to top mRNA from alignment at H-paniculata_contig2686:5695..12072- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2686.7346.1 ID=mRNA_H-paniculata_contig2686.7346.1|Name=mRNA_H-paniculata_contig2686.7346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6378bp|location=Sequence derived from alignment at H-paniculata_contig2686:5695..12072- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2686:5695..12072- >mRNA_H-paniculata_contig2686.7346.1 ID=mRNA_H-paniculata_contig2686.7346.1|Name=mRNA_H-paniculata_contig2686.7346.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3726bp|location=Sequence derived from alignment at H-paniculata_contig2686:5695..12072- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |