prot_H-paniculata_contig2684.7341.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2684.7341.1
Unique Nameprot_H-paniculata_contig2684.7341.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length137
Homology
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: G4YKY0_PHYSP (DNA topoisomerase n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YKY0_PHYSP)

HSP 1 Score: 62.0 bits (149), Expect = 1.670e-8
Identity = 26/49 (53.06%), Postives = 29/49 (59.18%), Query Frame = 0
Query:   78 VPRCQGHNNECALRTVRKEGANQGRQFYCCGGTEADQCNTFIWADEVGS 126
             P C GHN  C LRT R+ G NQ R+FY C    AD C  F W DE+GS
Sbjct:  804 APLCSGHNVSCILRTTRRPGPNQNREFYSCSFQGADSCGYFEWKDEMGS 852          
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: A0A2V0NPE8_9CHLO (DNA-(apurinic or apyrimidinic site) endonuclease 2 n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NPE8_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 4.150e-8
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   79 PRCQGHNNECALRTVRKEGANQGRQFYCC----GGTEADQCNTFIWA 121
            PRC+GHN EC +RTV+K+G  +GRQFYCC    G     +C+ F+W+
Sbjct:  704 PRCKGHNEECVVRTVKKDGPTKGRQFYCCARASGPPGVGRCDYFLWS 750          
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: A0A8C2YA87_COTJA (DNA-(apurinic or apyrimidinic site) lyase n=3 Tax=Phasianidae TaxID=9005 RepID=A0A8C2YA87_COTJA)

HSP 1 Score: 60.1 bits (144), Expect = 7.410e-8
Identity = 25/44 (56.82%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   79 PRCQGHNNECALRTVRKEGANQGRQFYCCGGTEADQCNTFIWAD 122
            PRC  H + C LRTVRK+G N+GR FYCC      +CN F WAD
Sbjct:  488 PRCSKHGHLCKLRTVRKDGENKGRMFYCCPLPTETRCNYFQWAD 531          
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: A0A7J7F354_DICBM (DNA-(apurinic or apyrimidinic site) lyase n=2 Tax=Rhinocerotidae TaxID=9803 RepID=A0A7J7F354_DICBM)

HSP 1 Score: 59.7 bits (143), Expect = 1.000e-7
Identity = 26/44 (59.09%), Postives = 29/44 (65.91%), Query Frame = 0
Query:   79 PRCQGHNNECALRTVRKEGANQGRQFYCCGGTEADQCNTFIWAD 122
            PRC  H+  CALR VRK+GAN+GRQFY C      QC  F WAD
Sbjct:  470 PRCSKHHRLCALRVVRKDGANKGRQFYACPLPREAQCGFFQWAD 513          
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: A0A7S2S3I4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3I4_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.350e-7
Identity = 31/49 (63.27%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   75 DGDVPRCQGHNNECALRTVRKEGANQGRQFYCCGGTEADQCNTFIWADE 123
            DG+ P C  H    A  TVRKEGANQGRQFY C   EA  CNTF WADE
Sbjct:   99 DGNDPTCPVHKGALAKLTVRKEGANQGRQFYKC--KEAG-CNTFQWADE 144          
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: F6WTV1_HORSE (DNA-(apurinic or apyrimidinic site) lyase n=8 Tax=Equus TaxID=9789 RepID=F6WTV1_HORSE)

HSP 1 Score: 58.9 bits (141), Expect = 1.880e-7
Identity = 26/49 (53.06%), Postives = 30/49 (61.22%), Query Frame = 0
Query:   74 GDGDVPRCQGHNNECALRTVRKEGANQGRQFYCCGGTEADQCNTFIWAD 122
            G+   PRC  H+  CALR VRK+G N+GRQFY C      QC  F WAD
Sbjct:  501 GNASSPRCSQHHRLCALRVVRKDGENKGRQFYACPLPREAQCGFFQWAD 549          
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: UPI0009A44B54 (endonuclease 8-like 3 n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A44B54)

HSP 1 Score: 57.0 bits (136), Expect = 8.590e-7
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0
Query:   77 DVPRCQGHNNECALRTVRKEGANQGRQFYCCGGTEADQCNTFIWAD 122
            + P C+ H+  C LR V+KEG N+GRQFY C   +  QC+ F WAD
Sbjct:  410 ETPCCKKHSRPCTLRLVKKEGDNEGRQFYVCSLPQESQCDYFQWAD 455          
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: A0A6P3W4X4_CLUHA (DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=Clupea harengus TaxID=7950 RepID=A0A6P3W4X4_CLUHA)

HSP 1 Score: 56.6 bits (135), Expect = 1.190e-6
Identity = 23/45 (51.11%), Postives = 26/45 (57.78%), Query Frame = 0
Query:   78 VPRCQGHNNECALRTVRKEGANQGRQFYCCGGTEADQCNTFIWAD 122
            +P C  H     LR V KEG N+GRQFYCC      +CN F WAD
Sbjct:  469 IPCCASHGRPSVLRVVNKEGXNRGRQFYCCSLPRESKCNFFEWAD 513          
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: A0A822CY91_9NEOB ((mimic poison frog) hypothetical protein n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822CY91_9NEOB)

HSP 1 Score: 55.8 bits (133), Expect = 1.840e-6
Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 0
Query:   79 PRCQGHNNECALRTVRKEGANQGRQFYCCGGTEADQCNTFIWAD 122
            P C  HN   ALR VRK+G N+GRQFY C   +  QC+ F WAD
Sbjct:  224 PHCSKHNRPSALRVVRKDGENKGRQFYSCALPKERQCDYFQWAD 267          
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Match: A0A0P7WVC2_SCLFO (Uncharacterized protein (Fragment) n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7WVC2_SCLFO)

HSP 1 Score: 55.8 bits (133), Expect = 2.030e-6
Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 0
Query:   79 PRCQGHNNECALRTVRKEGANQGRQFYCCGGTEADQCNTFIWAD 122
            P C  H   CALR VRKEG N+GRQFY C   +  +C+ F WAD
Sbjct:  265 PCCAVHRRPCALRVVRKEGDNKGRQFYACSLPQETRCDFFKWAD 308          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2684.7341.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G4YKY0_PHYSP1.670e-853.06DNA topoisomerase n=1 Tax=Phytophthora sojae (stra... [more]
A0A2V0NPE8_9CHLO4.150e-851.06DNA-(apurinic or apyrimidinic site) endonuclease 2... [more]
A0A8C2YA87_COTJA7.410e-856.82DNA-(apurinic or apyrimidinic site) lyase n=3 Tax=... [more]
A0A7J7F354_DICBM1.000e-759.09DNA-(apurinic or apyrimidinic site) lyase n=2 Tax=... [more]
A0A7S2S3I4_9STRA1.350e-763.27Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
F6WTV1_HORSE1.880e-753.06DNA-(apurinic or apyrimidinic site) lyase n=8 Tax=... [more]
UPI0009A44B548.590e-750.00endonuclease 8-like 3 n=1 Tax=Rhincodon typus TaxI... [more]
A0A6P3W4X4_CLUHA1.190e-651.11DNA-(apurinic or apyrimidinic site) lyase n=1 Tax=... [more]
A0A822CY91_9NEOB1.840e-654.55(mimic poison frog) hypothetical protein n=1 Tax=R... [more]
A0A0P7WVC2_SCLFO2.030e-654.55Uncharacterized protein (Fragment) n=1 Tax=Sclerop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010666Zinc finger, GRF-typePFAMPF06839zf-GRFcoord: 80..123
e-value: 1.3E-13
score: 50.8
NoneNo IPR availablePANTHERPTHR22993:SF10ENDONUCLEASE 8-LIKE 3coord: 75..123
NoneNo IPR availablePANTHERPTHR22993FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASEcoord: 75..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2684contigH-paniculata_contig2684:6970..10799 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2684.7341.1mRNA_H-paniculata_contig2684.7341.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2684 6970..10799 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2684.7341.1 ID=prot_H-paniculata_contig2684.7341.1|Name=mRNA_H-paniculata_contig2684.7341.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=137bp
VVDDEEDAYGAAIKGIAPKKKRGGGTGGGSSGVGANKRVATSRLGQATGR
SGGVVGAGGGFGGGGGNEAGDNRGDGDVPRCQGHNNECALRTVRKEGANQ
GRQFYCCGGTEADQCNTFIWADEVGSSGGGGGGGNGR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010666Znf_GRF