prot_H-paniculata_contig2683.7337.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2683.7337.1
Unique Nameprot_H-paniculata_contig2683.7337.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1066
Homology
BLAST of mRNA_H-paniculata_contig2683.7337.1 vs. uniprot
Match: D8LQ82_ECTSI (PDZ domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ82_ECTSI)

HSP 1 Score: 355 bits (910), Expect = 5.670e-99
Identity = 368/975 (37.74%), Postives = 485/975 (49.74%), Query Frame = 0
Query:    1 MVHAPILLSFSPGPLGIELEPVWQAGEKSVGCRVAGFKRSGDGAVGQAERLGQVGEGDILTEVNDIPVSGMLFDKIIDMLRRDANQVNRRLSFRPSATPTSVKDPMLPPPQAQSAPERNTE-KHTVDNLDTPSMTLSPETRPP-PALQVEP---GATTAEEPRFDHKEHVGSGS-VRWAIGLLGMGRRGQFDAMM------------GVGNESANRQ--EGDGDVGMIVGGDE--SADARALRGVVIGKDGVECSNVHGDL-DGVVGEHGNPD---DRKLQRL--LLPVGGVLAEAAAIEDESLNGAIEESICSNGSSHDTETGTGRSTGRVADGRTGRKDSVTERPLSGESADTSDRRIVIAADVEVSTVGPASFRAKGVPATDEHREHRPKNSRSGTPGFAVAAVAAPCEENGV-------VGMVIPPPAAAHERHQSDQEEGVNAHSPLGAPGRATDQSLDTVSLHSEPVGFANKNGSAGKSPWINLSHFWEGAAGVAAGGRSSLDFSLSGTDAGDGEGEGVRRLARSLAAKLKERAWRCEELEDLCGLRDDQVAMLQRQSNALAGRVAALSEQLLDQNALADALQNERSRLEQELAQQAQRHHSR-PVSLGGSGSGGSPIAIHMASAKTGEKSDCKSVSRASADVGVDNVNTATVMGDINGELERPAAAXXXXXXXXXXXXXXXXXXXXXXXXGEMVDSMVSEKVKWEEERAAYAAKALRLRARNRGLENALANSAGGATGGEDESDADGWRKGRGQGQSAALRELLRLRTGELEAKHGTVERLAACVRELQHETRQLNVSLSAREGDVLASDREMEALSKRMKGELLEKEVAVVKAEAEAKELRQALQVA----------------TANPSDESKSGVDGASTADGNYARLVVEKVQWTEERARLQHNLLSLQKLLEQREARAATEESAVASLLEKTRNDRDRFKNETVSLQHSAESLRVELAHALSSLA 923
            M  A   L F PGPLG+ELEPVW+AG +++GCRVAGFK S DG+ GQA+R G V  GD+LT V D+PV  M F+KI+ +LR    +  RRL+F+ S+ P +   P  PP   ++  ++       V+  DT   +    T P  P+ + +P   G T  E    DH+  V  GS V      LG  R      MM            G+G E       +G   VG+  G D+  +A +  L GV         +    DL D  VG   +P+   D   Q L  +L   G++ EA   E   ++  +     +N SS     G G + G+     T          LSG+ A   +RR++ A      +   A  +   VPA     +H+P+   SG   F  AA+A P     V       V  +        +R       G     PL +     D+S DTVSL SEP  +A +  ++ K     L+  W G  G +    S         + G+GE E  RRLARSLA KLKERA RCEELEDL GLRD QV+MLQRQSN+LA R A+L++ L D++AL +ALQ +RSRLE+EL Q   RH      + G  GSG         SA++G   +  S+ R                             XXXXXXXXXXXXXXXXXXX      EMVD +V+ KV WEEERAA AA+ALRLRA  RGLE A A +           + DG RK     Q   LRELLR RT ELEAK   +ERLA   REL+ E R+  VSLSARE D+L SDR+M+ALS R+KGE+     A  +AEA                              +PS  + +G DG S         +  +V+W EERARLQHNL+SL++ LE RE +A  +E+A++S L+  R+DRDR   E  +L+ + +SLRVELA AL+  A
Sbjct:    2 MAPATTSLVFYPGPLGLELEPVWEAGGRAIGCRVAGFKSSPDGSAGQAQRTGAVRPGDVLTGVGDVPVGNMSFEKIVALLRHRTTRPERRLTFQ-SSLPATTGAPTPPPRSPRTRIQQQASLMFVVEGNDTTVASSGGRTEPATPSPEAQPRPVGVTNGEG--VDHQPAVRVGSRVEEQQQRLGWARPADEADMMTAQTLKSAPEGAGMGEEDDGIAWWKGAQQVGLGQGSDDDNTAASDTLSGVECFCPDGHAAGAMADLADVAVGVSYSPESGRDSSSQGLAQVLYEAGLVPEACRQETNGMD--VVAPAAANDSSAHEHVGDGGNAGQQCGNPTPTHGPTGGLSLSGQVAGDEERRLMPA-----DSTSAADAQDPPVPACGPS-QHQPQRHTSGV--FCTAAIA-PTSPGDVGVGPSSTVSRISTGLDGRRDRRAHGFYAGNGGRLPLNSSPETVDRSFDTVSLRSEPTVYAKE--ASYKQRISMLTSLWGGGRGDSGAASSPA------LENGEGEVEEARRLARSLAVKLKERARRCEELEDLFGLRDHQVSMLQRQSNSLAARAASLADDLSDKSALIEALQLDRSRLERELVQSRLRHDEGVDAARGDDGSG-------RRSAESGACGEELSLPRPEX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLALAEMVDGLVAGKVGWEEERAARAAEALRLRALVRGLEEAAAVAG----------EGDGGRK-----QVEGLRELLRERTRELEAKSVAMERLAVRTRELEEENRRRGVSLSAREEDILVSDRQMQALSARLKGEVRISGEAAARAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXNVVSPSG-AAAGADGESGEGSADRPSIGNRVEWAEERARLQHNLMSLREALEDRERQAEADEAAMSSRLKAARDDRDRSAKEKGNLREAVDSLRVELAEALALAA 923          
BLAST of mRNA_H-paniculata_contig2683.7337.1 vs. uniprot
Match: A0A6H5KQW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQW2_9PHAE)

HSP 1 Score: 345 bits (886), Expect = 9.890e-96
Identity = 346/966 (35.82%), Postives = 471/966 (48.76%), Query Frame = 0
Query:   20 EPVWQAGEKSVGCRVAGFKRSGDGAVGQAERLGQVGEGDILTEVNDIPVSGMLFDKIIDMLRRDANQVNRRLSFRPSATPTSVKDPMLPPPQAQSA--PERNTEKHTVDNLD---------TPSMTLSPETRPPPALQVEPGATTAEEPRFDHKEHVGSGSVRWAIGLLGMGRRGQFDAMMGVGNESANR-----QEGDGD--------VGMIVGGDE--SADARALRGVVIGKDGVECSNVHGDLDG-VVGEHGNPD---DRKLQRL--LLPVGGVLAEAAAIEDESLNGAIEESICSNGSSHDTETGTGRSTGRVADGRTGRKDSVTERPLSGESADTSDRRIVIAADVEVSTVGPASFRAKGVPATDEHREHRPKNSRSGTPG-FAVAAVAAPCEENGVVG--MVIPPPAAAHERHQSDQEEGVNAHS----PLGAPGRATDQSLDTVSLHSEPVGFANKNGSAGKSPWIN-LSHFWEGAAGVAAGGRSSLDFSLSGTDAGDGEGEGVRRLARSLAAKLKERAWRCEELEDLCGLRDDQVAMLQRQSNALAGRVAALSEQLLDQNALADALQNERSRLEQELAQQAQRHHSR-PVSLGGSGSGGSPIAIHMASAKTGEKSDCKSVSRASADVGVDNVNTATVMGDINGEL-ERPAAAXXXXXXXXXXXXXXXXXXXXXXXXGEMVDSMVSEKVKWEEERAAYAAKALRLRARNRGLENALANSAGGATGGEDESDADGWRKGRGQGQSAALRELLRLRTGELEAKHGTVERLAACVRELQHETRQLNVSLSAREGDVLASDREMEALSKRMKGELLEKEVAVVKAEAEAKELRQALQVAT-----ANPSDESK----------SGVDGASTADGNYARLVVEKVQWTEERARLQHNLLSLQKLLEQREARAATEESAVASLLEKTRNDRDRFKNETVSLQHSAESLRVELAHALSSLAETHRG 928
            EPVW+A  +++GCRVAGFK S DG+ GQA+R G V  GD+LT V D+PV  M F+KI+ +LR+   +  RRL+F+ S T T+      PPP++      ++ +    V+  D         T   T SPE +P P      G T  E       + VGS        L       + D M     +SA       +E DG         VG+  G D+  +A +  L GV      V  +    DL    VG  G+P+   D   Q L  +L   G++ EA   +   ++  +     ++ SS     G G + G+               PLSG+ A   +RR++ A      +   A  R   VPA    +   P++    TPG F++AA+A     + VVG    +   +   +  +   E G  A +    PL +     D+S DT+SL SEP  +A +   A    WI+ L+  W G  G + G  S         + G+GE E  RRLARSLA KLKERA RCEELEDL GLRD QV+MLQRQSN+LA R A+L++ L D++AL +ALQ +RSRLE+ELAQ   RH      + G  GSG                                             E+ ER A A  X X                    EMVD +V+ K+ WEEERAA AA+ALRLRA  RGLE A A +                 +G G+ Q   LRELLR RT ELEAK   +ERLA  +REL+ E  +L VSLSARE D+L SD +M ALS R+K E+     A  +AEA   ELR+AL+ AT     A  S E++          +G DG S         +  +++W EE ARLQHNL+SL++ LE RE +AA +E+A++S L+  R+DRDR   E  +L+ + +SLRVELA A S+LA +  G
Sbjct:   57 EPVWEASGRAIGCRVAGFKSSPDGSAGQAQRTGAVRPGDVLTGVGDVPVGDMSFEKIVTLLRQRPTRPERRLTFQSSLTATTTAP--TPPPRSPRTRIQQQASLMFVVEGNDATVASSGGRTEPATPSPEAQPRPV-----GGTNDEGVDHQPADRVGSRVEERQQRLGWASPADEVDMMTAQPPKSAPEGTALGEEDDGSAWWKGAQQVGLGQGSDDDNTATSDTLSGVEYFCPDVHAATAMTDLAASAVGVSGSPENGRDSSSQGLAQVLYEAGLVPEACRQDTNGMD--VLAPAAASDSSAPEHVGDGGNAGQQCGDAAATHGVTGGPPLSGQVAGDEERRLLPA-----DSTSAADARNPPVPACGPSQHQLPRH----TPGVFSLAAIAPTSPGDVVVGPSSTVSRISTGLDGRRDRGEHGFYAGNGGRLPLNSSPETVDRSFDTISLRSEPTVYAKE---ASSKQWISMLTSLWGGGRGDSGGESSPAP------ENGEGEVEEARRLARSLAVKLKERARRCEELEDLFGLRDHQVSMLQRQSNSLAARAASLADDLSDKSALIEALQLDRSRLERELAQSRLRHEEGVDAARGDDGSGQRSAESGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVAERKATAAEXRXLAL----------------AEMVDGLVAGKIGWEEERAARAAEALRLRALVRGLEEAAALAG---------------EEGGGRKQVEGLRELLRERTRELEAKSVAMERLAMRIRELEEENCRLGVSLSAREEDILVSDMQMRALSARLKEEVRASGEAAARAEAVVGELRKALEEATTAAEVAGGSGEAEENVASPGGAAAGADGESGEGSTDRPSIGNRLEWAEEHARLQHNLMSLREALEDRERQAA-DEAAMSSTLKAARDDRDRSAREKGNLREAVDSLRVELAEA-SALAASSSG 962          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2683.7337.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LQ82_ECTSI5.670e-9937.74PDZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KQW2_9PHAE9.890e-9635.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 536..570
NoneNo IPR availableCOILSCoilCoilcoord: 855..875
NoneNo IPR availableCOILSCoilCoilcoord: 795..822
NoneNo IPR availableGENE3D2.30.42.10coord: 10..106
e-value: 1.9E-5
score: 26.5
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 13..99
e-value: 0.0075
score: 25.5
IPR001478PDZ domainPROSITEPS50106PDZcoord: 13..95
score: 8.969
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 46..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2683contigH-paniculata_contig2683:1219..8538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2683.7337.1mRNA_H-paniculata_contig2683.7337.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2683 1219..8538 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2683.7337.1 ID=prot_H-paniculata_contig2683.7337.1|Name=mRNA_H-paniculata_contig2683.7337.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1066bp
MVHAPILLSFSPGPLGIELEPVWQAGEKSVGCRVAGFKRSGDGAVGQAER
LGQVGEGDILTEVNDIPVSGMLFDKIIDMLRRDANQVNRRLSFRPSATPT
SVKDPMLPPPQAQSAPERNTEKHTVDNLDTPSMTLSPETRPPPALQVEPG
ATTAEEPRFDHKEHVGSGSVRWAIGLLGMGRRGQFDAMMGVGNESANRQE
GDGDVGMIVGGDESADARALRGVVIGKDGVECSNVHGDLDGVVGEHGNPD
DRKLQRLLLPVGGVLAEAAAIEDESLNGAIEESICSNGSSHDTETGTGRS
TGRVADGRTGRKDSVTERPLSGESADTSDRRIVIAADVEVSTVGPASFRA
KGVPATDEHREHRPKNSRSGTPGFAVAAVAAPCEENGVVGMVIPPPAAAH
ERHQSDQEEGVNAHSPLGAPGRATDQSLDTVSLHSEPVGFANKNGSAGKS
PWINLSHFWEGAAGVAAGGRSSLDFSLSGTDAGDGEGEGVRRLARSLAAK
LKERAWRCEELEDLCGLRDDQVAMLQRQSNALAGRVAALSEQLLDQNALA
DALQNERSRLEQELAQQAQRHHSRPVSLGGSGSGGSPIAIHMASAKTGEK
SDCKSVSRASADVGVDNVNTATVMGDINGELERPAAAAAAAAAEARADAA
VAKAEARASALGEMVDSMVSEKVKWEEERAAYAAKALRLRARNRGLENAL
ANSAGGATGGEDESDADGWRKGRGQGQSAALRELLRLRTGELEAKHGTVE
RLAACVRELQHETRQLNVSLSAREGDVLASDREMEALSKRMKGELLEKEV
AVVKAEAEAKELRQALQVATANPSDESKSGVDGASTADGNYARLVVEKVQ
WTEERARLQHNLLSLQKLLEQREARAATEESAVASLLEKTRNDRDRFKNE
TVSLQHSAESLRVELAHALSSLAETHRGIVGKPGEENPDGKIEAIVIDLP
DDGTEEVEIRGKEIDPLNWTGSEGGKGNRVEYGERDTDYPEDGVSREDAV
SVAVGDEVPVEGDKSSGSGDTSGVSGREGGQTAAGRRDGDVGDWEGVLPS
AAASGAGMQGSGLWVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf