prot_H-paniculata_contig2681.7334.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2681.7334.1
Unique Nameprot_H-paniculata_contig2681.7334.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length415
Homology
BLAST of mRNA_H-paniculata_contig2681.7334.1 vs. uniprot
Match: D7FQ91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ91_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 4.670e-48
Identity = 160/465 (34.41%), Postives = 223/465 (47.96%), Query Frame = 0
Query:    2 FWPRLEDLNLVATGIRSAVLLDSRHAPRGSPPLANVLRALQDSRR--------CKARSTSNSDGCCIDDISSLGLLALDGSNFLVNRRLLRSRLAEVLAPCTPTTHTLSSTTKHSEGVDIANVMGSDGNHSGSWHSKTLPKAEKISSPAKDSGDGITVPTDRDFALVDVRDSVRVPRLCTELLAPRL-VAVLWSVFGNINAADASI-------GAIVNPPV--TQRQADAATSALPTNSSSQ-----GMSEGEDSR-ESGERWVLNWGRVELTLEVGDNLLMALGDVGMPGLAGWLLEYPVIYCCPSMIHGNDQVPPGTPTFSEGVPGNCLAMVQLSVYSVDMEFGNEIAPTSSN--------DCKV----FKAFSFSIPDRVCAGTDSDRS-------GAI---------TVPDYLLGLVDKFTSRMQGRIARCVSNSCCQCRQALPTGLNVRRRIEVLDRVAL 414
            FWPR  D+ L A G+R AVLLDSR APR SPPLA+VL ALQ  ++        C  R   +   C    ++ LGLL L+GS+FLVNR +L  RL E+ +  T     +    + S     A         SG       P  +  +S  +   D       RD AL+DV  ++ VP   +++LAPRL  A+LW+  G   AA A+        G    PP   T R++ A  ++  +N   +     G+     S  E G RW+ +W   EL L+  ++L+  LGDVG+ G+AGWLLEYP IYCC S+  G      G     E   GNCLA V L+VYS+ ++ G++   +SS            V    F+AFSFS+P+ +C  T++++        GA               L GLVD F   +  R+AR   +        L   LNV +R   LD+VAL
Sbjct:   52 FWPRFGDICLAAAGVRCAVLLDSRRAPRRSPPLADVLLALQHDQQERQQQKEHCATRDCHSDCDCNSGGVACLGLLVLEGSSFLVNRVMLVRRLNELFSGETIAAEPVDERFRRS-----ATCATDCDKKSGYGTEAVRPAVDGAASAHQRHFDR------RDLALLDVNMALAVPSDRSDVLAPRLYAALLWAFGGATVAATANSVEEGRARGPSPTPPPRGTSRESTAMETSAKSNREDRFCGGDGVHRVPPSELEGGARWLRDWSMKELVLDC-ESLVKTLGDVGLSGMAGWLLEYPAIYCCSSLNDGTTNGSDGKEM--EHARGNCLAAVPLTVYSLAVDLGDKGRGSSSRPQPSLDERSASVTGAWFEAFSFSVPEAMCGPTETEQDEDEVNGGGACGENREERHRRTAAALHGLVDNFVQTIDRRLARLRRSGVNGNDSFL--SLNVSKRRATLDQVAL 500          
BLAST of mRNA_H-paniculata_contig2681.7334.1 vs. uniprot
Match: A0A6H5LL79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL79_9PHAE)

HSP 1 Score: 176 bits (447), Expect = 1.280e-46
Identity = 157/470 (33.40%), Postives = 216/470 (45.96%), Query Frame = 0
Query:    2 FWPRLEDLNLVATGIRSAVLLDSRHAPRGSPPLANVLRALQDSR--------RCKARSTSNSDGCCIDDISSLGLLALDGSNFLVNRRLLRSRLAEVLAPCTPTTHTLSSTTKHSEGVDIANVMGSDGNHSGSWHSKTLPKAEKISSPAKDSGDGITVPTDRDFALVDVRDSVRVPRLCTELLAPRLVAVLWSVFGNINAADASIGAIVN-------------PPVTQRQADAATSALPTNSSSQGMSEGEDS--------RESGERWVLNWGRVELTLEVGDNLLMALGDVGMPGLAGWLLEYPVIYCCPSMIHGNDQVPPGTPTFSEGVPGNCLAMVQLSVYSVDMEFGNEIAPTSSNDCKV------------FKAFSFSIPDRVCAGTDSDRS-------GAI---------TVPDYLLGLVDKFTSRMQGRIARCVSNSCCQCRQALPTGLNVRRRIEVLDRVAL 414
            FWPR  D+ LVA G+R AVLLDSR APRG PPLA+VL A+Q  +        RC  R   +   C    ++ LGLL L+GS+FLVNR +L  RL E+ +  T          + S     +      G  SG + ++ +  A  +++ A     G      RD  L+DV  ++ VP   +++LAPRL A L   FG      A++ A  N             PP      ++     P  S+ +    G D          E G RW+ +    EL L+  ++L+  LGDVG+ GLAGWLLEYPVIYCC S+  G      G     E   GNCLA V L+VYS  ++ G++    SS                 F AFSFS+P+ +C  T++++        GA               L GLVD F   +  R+AR   +        L   LNV +R   LD+VAL
Sbjct:   52 FWPRFGDVCLVAAGVRCAVLLDSRRAPRGFPPLADVLLAMQHDQQERQQQKERCATRDCHSDCDCSSGGVACLGLLVLEGSSFLVNRVMLVHRLNELFSGETIAAQQADEMFRRS-----STCATGCGKKSG-YEAEAVRPAVDVAASAHQRRLGW-----RDSTLLDVNKALAVPSDRSDVLAPRLCAALLWAFGG-----ATVAATANSVEGGRASRPSPTPPPRGTSRESMAMETPAKSNKEDRFCGGDGVHRVLPSELEGGARWLRDLSMKELILDC-ESLVKTLGDVGLSGLAGWLLEYPVIYCCSSLNDGTSNGSDGKEM--EHARGNCLAAVPLTVYSFAVDLGDKGRGCSSRSQPSLDERSVSATGAWFDAFSFSVPETMCGPTETEQDEDEVNGGGACGENREERHRRTAAALHGLVDNFVQTIDRRLARLRGSGDNGNGSFL--SLNVFKRRATLDQVAL 500          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2681.7334.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQ91_ECTSI4.670e-4834.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LL79_9PHAE1.280e-4633.40Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018247EF-Hand 1, calcium-binding sitePROSITEPS00018EF_HAND_1coord: 353..365

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2681contigH-paniculata_contig2681:17156..18774 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2681.7334.1mRNA_H-paniculata_contig2681.7334.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2681 17154..18852 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2681.7334.1 ID=prot_H-paniculata_contig2681.7334.1|Name=mRNA_H-paniculata_contig2681.7334.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=415bp
MFWPRLEDLNLVATGIRSAVLLDSRHAPRGSPPLANVLRALQDSRRCKAR
STSNSDGCCIDDISSLGLLALDGSNFLVNRRLLRSRLAEVLAPCTPTTHT
LSSTTKHSEGVDIANVMGSDGNHSGSWHSKTLPKAEKISSPAKDSGDGIT
VPTDRDFALVDVRDSVRVPRLCTELLAPRLVAVLWSVFGNINAADASIGA
IVNPPVTQRQADAATSALPTNSSSQGMSEGEDSRESGERWVLNWGRVELT
LEVGDNLLMALGDVGMPGLAGWLLEYPVIYCCPSMIHGNDQVPPGTPTFS
EGVPGNCLAMVQLSVYSVDMEFGNEIAPTSSNDCKVFKAFSFSIPDRVCA
GTDSDRSGAITVPDYLLGLVDKFTSRMQGRIARCVSNSCCQCRQALPTGL
NVRRRIEVLDRVAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018247EF_Hand_1_Ca_BS