prot_H-paniculata_contig2681.7333.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2681.7333.1
Unique Nameprot_H-paniculata_contig2681.7333.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1158
Homology
BLAST of mRNA_H-paniculata_contig2681.7333.1 vs. uniprot
Match: A0A6H5L2A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2A2_9PHAE)

HSP 1 Score: 456 bits (1172), Expect = 2.580e-137
Identity = 378/818 (46.21%), Postives = 461/818 (56.36%), Query Frame = 0
Query:  368 MRAVGGWAPALRXXXXXXXXXXXXXXXXYNVALSVIARSGRDDVALXXXXXXXXXXXXXXXXXXXXXXXXXXVSENWHEAVRLLEEDMVDAKIQPDVVTLTSVIHACSGPGGNWEKAYKLLDQMYQNESSALPNKSTYDXXXXXXXXXXXXXXXXXXXXDMADVGIALDTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERAKQVFDEARYVHRLIPTLHIYGALLSCLADCQQWSDVLLYLDRMAADGVAPDSAAIATGVLAAAQLGYGRRALSLLDGEKWIG--GGGNTDPLHGNSEEEDPVSDRKL-------PRGISACQKGAGG------------------------------KWDGVETVEEGKW------------------------DKEEGIKST-------TLATGGWEALTPTLLTTLLHALEHEKEDAIVLGTVRRAREAGVVLNSRIYRQVMQELGRQVCALKACGNLGDCSQANHLLSQMQEENLMPNIMHWNHALRTTTACAHWRQAHSHLRAMHAAGVTPDEFSYMMALKACSAGLWSGNSWDEIDGCGTQ-DRDTSAVAQPLDILGYM---GESPGANIPP-CRGRHALELLDEMKAFGIQLCERSLALAMAACLESHRDSHIG-----DRRSGPSENEHQLSEEALSLFDRLLETGVTPSSTTFALALKACARTANTSRASSLLLFMLDTHRAQASEPSFS--PSLWGAVQ--------------PHDGLPTLEVRPGHLASAIAAFDAAGDWGGAVGLWEEVLSRGVAPRSPGYAA 1089
            M AV GW  ALR                YN ALSV+ARSGR+DVAL          XXXXXXXXXXXX      E W EAV LLE DM  AK++             +GP GNWEKAY+LLD M+Q+   A P+K TYD                    DM D+GI     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +RA ++FDEARYVHR+ P+L IYGALL  LA+ ++W+DVL+Y+DRM ADGVA D+AA  T VLAAA+LG GRRALSLL+G +     GG   + +     EE   SD +L        R  +A  +G GG                              K  G E+    +                         + E+G + T           GGWE +TP LL ++L AL+ + ED+ VL  V+R RE GV+LN  IYR          CALKACGNLGD  QAN +L +M EE+L P+I+HWNHALR + ACA W++    L+ M  +G TPDEFSY MALKACSAGLWSG+SW +  G G + D+ +      L+  G +   G+     +P  CRG++A+ELL EMK  G++L   +  LAMAACLE HRD H       D+  GP   + +L+E AL LFDRL+  G TP++  +A ALKACARTAN  RA++L  FMLD     A+  + S   SL                   P    P  EVRP HLASAIAA+DAAGDW GA  LW+E L RGV+PRSPGY A
Sbjct:  336 MTAVDGWGAALRLLEGVLPDVNT-----YNAALSVVARSGREDVALALLNRMRIDGXXXXXXXXXXXXDACASREKWQEAVELLEVDMPAAKVKXXXXXXXXXXXXXAGPTGNWEKAYQLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFDEARYVHRIRPSLQIYGALLGALAEGERWADVLVYMDRMVADGVARDAAATNTAVLAAAELGDGRRALSLLEGGEGSQQRGGRQREMVRDAGGEEGGGSDNRLLWDGLQRRRRPAAVDEGDGGRGVVLGQGELEGETEALLGRRQRAATAAGEKRHGEESEVRARTRIRPCPEAARERQGVLGEQNCVDEESEDGTRRTGGDSDSVDDGVGGWEGVTPGLLISVLRALDEQDEDSAVLEAVKRGREKGVLLNPSIYR----------CALKACGNLGDYDQANDILVRMAEESLTPDIVHWNHALRASAACARWQETRLRLKEMETSGSTPDEFSYSMALKACSAGLWSGDSWCDSRGWGAEEDKSSCRRKNALNGEGQLDGSGDKKEPKVPQACRGKNAIELLQEMKQRGVRLSAHAYTLAMAACLEGHRDRHPELEAGLDKEKGPPSADLRLAEAALLLFDRLVAAGETPTADAYAHALKACARTANPQRANALFWFMLDAASPPAAVQTSSNLSSLRNGASGNYVADGQRRHSRPPSPPQPRPEVRPWHLASAIAAYDAAGDWTGAKQLWDEALRRGVSPRSPGYDA 1138          
BLAST of mRNA_H-paniculata_contig2681.7333.1 vs. uniprot
Match: D7FQ90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ90_ECTSI)

HSP 1 Score: 435 bits (1118), Expect = 6.070e-134
Identity = 341/736 (46.33%), Postives = 423/736 (57.47%), Query Frame = 0
Query:  455 MVDAKIQPDVVTLTSVIHACSGPGGNWEKAYKLLDQMYQNESSALPNKSTYDXXXXXXXXXXXXXXXXXXXXDMADVGIALDTQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERAKQVFDEARYVHRLIPTLHIYGALLSCLADCQQWSDVLLYLDRMAADGVAPDSAAIATGVLAAAQLGYGRRALSLLDG---EKWIGG-------------GGNTDPLHGNSEEEDPVSDRKLPRGIS----------------------------ACQKG----------------------AGGKWDGVETVEEGKWDK-EEGIKSTTLAT--------GGWEALTPTLLTTLLHALEHEKEDAIVLGTVRRAREAGVVLNSRIYRQVMQELGRQVCALKACGNLGDCSQANHLLSQMQEENLMPNIMHWNHALRTTTACAHWRQAHSHLRAMHAAGVTPDEFSYMMALKACSAGLWSGNSWDEIDGCGTQ-DRDTSAVAQPLDILGYM---GESPGANIPP-CRGRHALELLDEMKAFGIQLCERSLALAMAACLESHRDSHIG-----DRRSGPSENEHQLSEEALSLFDRLLETGVTPSSTTFALALKACARTANTSRASSLLLFMLDTHRAQAS--EPSFSPSLWGAVQ--------------PHDGLPTLEVRPGHLASAIAAFDAAGDWGGAVGLWEEVLSRGVAPRSPGYAA 1089
            M  AK++PDV++ TS IHAC+GP GNWEKAY+LLD M+Q+   A P+K TYD                    DM D+GI     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +RA ++FD+ARYVHR+ P+L IYGALL  LA+ ++W+DVL+YLDRM ADGVA D+AA  T VLAAA+LG GRRALSLL+G    +  GG             GG +D    N +  D +  R+ P G+                             A   G                      A G+  GV   E G  ++ ++G + T   +        GGWE +TP LL ++L AL+ + ED+ VL  V+R RE G++LN  IYR          CALKACGNLGD  QAN +L +M EE+L P+I+HWNHALR + ACA W++    L+ M   G TPDEFSY MALKACSAGLWSG+SW +  G G + D  +S     L   G +   G+     +P  CRG+ A+ELL EMK  G++L   +  LAMAACLE HRD H       D+  GP   + +L+E  L LFDRL+  G TP++  +A ALKACARTAN  RA++L   MLD     A+    S + SL                   P    P  EVRP HLAS I A+DAAGDW GA  LW+E L RGV+PRSPGY A
Sbjct:    1 MPAAKVKPDVISFTSAIHACAGPTGNWEKAYQLLDAMWQDPEGAKPSKHTYDLVIQACGHGGEWELGVTLIDDMRDLGIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEWKRATEIFDQARYVHRIRPSLQIYGALLGALAEGERWADVLVYLDRMVADGVARDAAATNTAVLAAAELGDGRRALSLLEGGEGSQQRGGRQRGVARDVVGEEGGGSD----NRQLCDGLQRRRRPAGVDEGDGIRGVVLGQGELEGEPEALLERRQRAATAGGEKRHGEESEVRARTRIRSSSEAAGERQGVVADENGVDEEAQDGTRRTERDSDSVDDGVGGGWEGVTPGLLNSVLRALDEQDEDSAVLEAVKRGREKGILLNQSIYR----------CALKACGNLGDYQQANDILVRMAEESLTPDIVHWNHALRASAACARWQETRLRLQEMETFGSTPDEFSYSMALKACSAGLWSGDSWCDSRGWGAEEDTSSSRRRNALSSEGQLDSSGDKQEPKVPQACRGKSAIELLQEMKQRGVRLSAHAYTLAMAACLEGHRDRHPELEAGLDKEKGPPSADLRLAEATLLLFDRLVAAGETPTADAYAHALKACARTANPQRANALFWVMLDDASPPAAVRTSSTASSLCNGASGDHVASGQRRHSPPPSPPQPRPEVRPWHLASTIVAYDAAGDWAGAKQLWDEALRRGVSPRSPGYDA 722          
BLAST of mRNA_H-paniculata_contig2681.7333.1 vs. uniprot
Match: D7FQ89_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ89_ECTSI)

HSP 1 Score: 58.5 bits (140), Expect = 3.320e-5
Identity = 27/43 (62.79%), Postives = 34/43 (79.07%), Query Frame = 0
Query:  119 IVAARNRRKWTEVLEVLDRWESQAEKLNAKTYNIALSALSKFG 161
            ++AA  RR+WTEVLE+L  WE  A +L+AKTYN+ALSAL K G
Sbjct:    1 MMAAARRRRWTEVLEILGHWEENAGRLDAKTYNVALSALGKCG 43          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2681.7333.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L2A2_9PHAE2.580e-13746.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQ90_ECTSI6.070e-13446.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQ89_ECTSI3.320e-562.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 149..178
e-value: 0.0011
score: 19.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 289..336
e-value: 6.5E-11
score: 42.3
coord: 180..231
e-value: 3.3E-7
score: 30.4
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 394..427
e-value: 3.2E-4
score: 18.7
coord: 184..212
e-value: 3.4E-4
score: 18.6
coord: 429..464
e-value: 1.5E-4
score: 19.7
coord: 504..536
e-value: 0.002
score: 16.2
coord: 292..326
e-value: 1.4E-7
score: 29.2
coord: 327..361
e-value: 2.6E-5
score: 22.1
coord: 149..182
e-value: 5.1E-6
score: 24.3
coord: 573..597
e-value: 1.6E-4
score: 19.6
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 379..438
e-value: 7.1E-10
score: 38.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 501..535
score: 9.514
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 787..821
score: 6.27
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 218..255
score: 10.874
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 822..856
score: 6.939
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 571..601
score: 9.021
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 146..180
score: 11.816
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 463..498
score: 9.01
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 290..324
score: 12.562
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 607..641
score: 8.758
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 256..289
score: 7.596
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 392..426
score: 11.093
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 988..1018
score: 5.579
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 181..215
score: 9.668
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 325..359
score: 10.687
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 427..462
score: 10.183
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1083..1117
score: 5.722
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1048..1082
score: 7.136
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 536..570
score: 10.008
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 371..477
e-value: 1.8E-27
score: 97.9
coord: 478..580
e-value: 9.9E-24
score: 85.6
coord: 581..669
e-value: 5.0E-14
score: 54.0
coord: 723..872
e-value: 2.1E-15
score: 58.5
coord: 275..370
e-value: 1.1E-26
score: 95.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 915..1156
e-value: 7.0E-22
score: 80.2
coord: 113..274
e-value: 3.0E-39
score: 137.2
IPR033443Pentacotripeptide-repeat region of PRORPPFAMPF17177PPR_longcoord: 502..666
e-value: 2.0E-8
score: 33.9
NoneNo IPR availablePANTHERPTHR46128FAMILY NOT NAMEDcoord: 482..652
coord: 341..494
coord: 795..867
coord: 919..1145
coord: 286..397
coord: 177..361
coord: 125..232
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..1157
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2681contigH-paniculata_contig2681:7151..15257 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2681.7333.1mRNA_H-paniculata_contig2681.7333.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2681 7088..15558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2681.7333.1 ID=prot_H-paniculata_contig2681.7333.1|Name=mRNA_H-paniculata_contig2681.7333.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1158bp
MGQIDIVACAFCSTPPVLSSGLLFAPNLRGCHTRVRQRPRPTQTCSCFQQ
QQQRLTTSIIMQAVAPSTQRRRTEAAGVHSINSRGLSPIRRNEVGVGVAA
PLPRSSDGHITAITAQKEIVAARNRRKWTEVLEVLDRWESQAEKLNAKTY
NIALSALSKFGRWQEATAILDRMSLNGVPPDVYSINGAISACGRAGKWQR
ALDLLAKMEQEGSGIRPDIFSYNSAINALAKAQPGRRWRQALGLLSKMNE
RGLTPDVCTYTSAMCACDRAGEWQASHVMDTMRERNIVPNVVSYGTAISA
CARSGQWQKALSLLAEMPSRGLTPNAVTYGSAVHACVVGEEPQQALALLD
EMMERGIAPDAAAFTAGMRAVGGWAPALRLLEAMKRHGTMPDLVAYNVAL
SVIARSGRDDVALAMLERMRKDGLSPDLVSFNTAIDACAVSENWHEAVRL
LEEDMVDAKIQPDVVTLTSVIHACSGPGGNWEKAYKLLDQMYQNESSALP
NKSTYDLVIQACGYGGEWELAVSLLDDMADVGIALDTQTFNMAIAACARS
GQWLAAHTLAATMPNRGVAPDGFTYTSVVAACGRTGKWERAKQVFDEARY
VHRLIPTLHIYGALLSCLADCQQWSDVLLYLDRMAADGVAPDSAAIATGV
LAAAQLGYGRRALSLLDGEKWIGGGGNTDPLHGNSEEEDPVSDRKLPRGI
SACQKGAGGKWDGVETVEEGKWDKEEGIKSTTLATGGWEALTPTLLTTLL
HALEHEKEDAIVLGTVRRAREAGVVLNSRIYRQVMQELGRQVCALKACGN
LGDCSQANHLLSQMQEENLMPNIMHWNHALRTTTACAHWRQAHSHLRAMH
AAGVTPDEFSYMMALKACSAGLWSGNSWDEIDGCGTQDRDTSAVAQPLDI
LGYMGESPGANIPPCRGRHALELLDEMKAFGIQLCERSLALAMAACLESH
RDSHIGDRRSGPSENEHQLSEEALSLFDRLLETGVTPSSTTFALALKACA
RTANTSRASSLLLFMLDTHRAQASEPSFSPSLWGAVQPHDGLPTLEVRPG
HLASAIAAFDAAGDWGGAVGLWEEVLSRGVAPRSPGYAAIIAAAARAGDL
TAAFRLKDEAQTKRQALLAPAFRLLMATCEARGENERAAQLYDDARSGRL
VIQESRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf
IPR033443PPR_long