prot_H-paniculata_contig268.7328.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig268.7328.1
Unique Name	prot_H-paniculata_contig268.7328.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	1316

Homology

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: D7G7C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C1_ECTSI)

HSP 1 Score: 182 bits (463), Expect = 2.950e-43
Identity = 90/157 (57.32%), Postives = 112/157 (71.34%), Query Frame = 0

Query:  582 MKGNAPWTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHGKKWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHWFAVSRGKGV 738
            MKGNAPWT EE+D LR+A + HSLKHWK+IAR VPGRTAVQCLQHYKHVL PGIERGSW+  ED++VM LV+ HG K  +           R R+   +     LK  EWT +EE +LLE+  ++G +WS+I+K +PGRS NSVKN W A +RG+GV
Sbjct:    1 MKGNAPWTAEENDRLREAASRHSLKHWKQIARSVPGRTAVQCLQHYKHVLHPGIERGSWTPAEDKQVMNLVAIHGTKVVQ----------DRSRDAAASRKANTLKRGEWTAEEERVLLERYAEIGPKWSQISKLIPGRSYNSVKNQWSAFNRGRGV 147

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: A0A7S4UQ57_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4UQ57_9EUKA)

HSP 1 Score: 166 bits (420), Expect = 1.110e-41
Identity = 80/155 (51.61%), Postives = 113/155 (72.90%), Query Frame = 0

Query:  583 KGNAPWTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHG-KKWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHWFAVSRGK 736
            KGN  WTPEED  LR+AVA+H+ K WKKIA H+ GR   QCL  ++ VL+P + +G W+ EED+ V+ELV +HG KKW+ IA  +  R+GK+ RER+ NHL+P +K  +WT +EE I+ +K K+LG +W++IAK LPGR+ N++KN+W +  R K
Sbjct:   30 KGN--WTPEEDQKLREAVAKHNGKSWKKIAEHLEGREDTQCLHRWQKVLNPKLVKGPWTKEEDELVIELVKQHGPKKWSLIAEHLKGRIGKQCRERWHNHLNPDIKKGQWTKEEETIIRQKQKELGNRWAEIAKFLPGRTDNAIKNYWNSTLRRK 182

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: A0A1E7FEX6_9STRA (Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEX6_9STRA)

HSP 1 Score: 159 bits (402), Expect = 5.200e-41
Identity = 74/150 (49.33%), Postives = 105/150 (70.00%), Query Frame = 0

Query:  588 WTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHG-KKWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHWFAVSRGK 736
            WT  ED+ L++AV EH  K+WK I+  +PGR+ VQCL  ++ VL P + +G W+AEED++V+ELV KHG KKW+ IA  +P R+GK+ RER+ NHL+P +    W  DE+  +LE    LG +W++IAK LPGR+ N++KNHW +  R K
Sbjct:   27 WTKHEDETLKEAVEEHGAKNWKLISSRLPGRSEVQCLHRWQKVLKPSLVKGPWTAEEDRKVVELVKKHGAKKWSLIATNLPGRIGKQCRERWHNHLNPDISKEAWKEDEDRTILESHITLGNRWAEIAKMLPGRTDNAIKNHWNSSMRRK 176

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: A0A6H5KVQ5_9PHAE (MYB protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVQ5_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.650e-39
Identity = 83/159 (52.20%), Postives = 100/159 (62.89%), Query Frame = 0

Query:  582 MKGNAPWTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHGKKWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHWFAVSRGKGVLN 740
            MKGNAPWT EE+D LR+A   HSLKHWK+IAR VPGRTAVQCLQHYKHVL PGIERGSW+  E   VM LV+ HG K                                   +EE +LLE+  ++G +WS+I+K +PGRS NSVKN W A++RG+GV N
Sbjct:    1 MKGNAPWTAEENDRLREAARRHSLKHWKQIARSVPGRTAVQCLQHYKHVLHPGIERGSWTPAE---VMNLVAIHGTKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEERVLLERYAEIGPKWSQISKLIPGRSYNSVKNQWSAINRGRGVSN 156

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: A0A7S2WMH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WMH6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 2.560e-39
Identity = 78/164 (47.56%), Postives = 112/164 (68.29%), Query Frame = 0

Query:  575 LNEDEVPMKG-NAPWTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHG-KKWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHWFAVSRGK 736
            L +D+   K  N  WT EED+ L+ AVA +  K+WKKIA   P RT VQCL  ++ VL+P + +G W+AEED +V+ELV  HG KKW  IA  +P R+GK+ RER+ NHL+P +    W+ DE+ ++LE  ++LG +W++IAK LPGR+ N++KNHW +  + K
Sbjct:   22 LGDDQRKRKSCNRRWTTEEDEKLKIAVARNGAKNWKKIAEAFPDRTEVQCLHRWQKVLNPELVKGPWTAEEDAKVIELVKLHGPKKWTMIADCLPGRIGKQCRERWHNHLNPKISKLAWSEDEDRVILEAHEKLGNRWAEIAKRLPGRTDNAIKNHWNSSMKRK 185

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: A0A1E7FDY8_9STRA (Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDY8_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.710e-39
Identity = 73/143 (51.05%), Postives = 102/143 (71.33%), Query Frame = 0

Query:  588 WTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHG-KKWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHW 729
            WT EED++LR+AVA +  K WKKIA  + GRT VQCL  ++ VL PG+ +G W+ EED +V+ELV  HG KKW+ IA ++  RLGK+ RER+ NHL+P +   EWT DE+  L++   +LG +W++IAK L GR+ N++KN W
Sbjct:    8 WTEEEDELLREAVANYGGKSWKKIAGRLSGRTDVQCLHRWQKVLKPGLIKGPWTQEEDSKVIELVKMHGNKKWSFIARQLKGRLGKQCRERWYNHLNPDINKGEWTNDEDKALIQAHDELGNRWAEIAKRLSGRTDNAIKNRW 150

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: A0A8N4F9T4_ELAGV (transcription factor MYB3R-5 isoform X7 n=2 Tax=Elaeis guineensis var. tenera TaxID=51953 RepID=A0A8N4F9T4_ELAGV)

HSP 1 Score: 156 bits (395), Expect = 3.590e-39
Identity = 73/143 (51.05%), Postives = 106/143 (74.13%), Query Frame = 0

Query:  588 WTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHG-KKWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHW 729
            WT +EDD+L +AV + + K+WKKIA   PGR+ VQCL  ++ VL+P + +G+W+ EED R+++LV+KHG KKW+ IA  +P R+GK+ RER+ NHL+P +K   WT +EEV L+   +  G +W++IAK LPGR+ NS+KNHW
Sbjct:   54 WTDKEDDLLVKAVKQFNGKNWKKIAELFPGRSDVQCLHRWQKVLNPELVKGTWTKEEDDRIIKLVAKHGCKKWSVIAKSLPGRIGKQCRERWHNHLNPSIKKDAWTPEEEVTLIHAHQIYGNKWAEIAKLLPGRTDNSIKNHW 196

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: UPI00192EEEB4 (transcription factor MYB3R-3-like n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192EEEB4)

HSP 1 Score: 159 bits (402), Expect = 9.220e-39
Identity = 72/143 (50.35%), Postives = 106/143 (74.13%), Query Frame = 0

Query:  588 WTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHGK-KWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHW 729
            WTPEED+ LR AVA ++ K WKKIA H P R+ VQCL  ++ VL+P + +G W+ EED ++++LVS++G  KW+ IA  +P R+GK+ RER+ NHL+P +K   WT++EE+ L++  +  G +W++IAK LPGR+ NS+KNHW
Sbjct:   67 WTPEEDETLRNAVAVYNGKSWKKIAEHFPDRSEVQCLHRWQKVLNPDLVKGPWTQEEDDKIIDLVSRYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIKKEAWTLEEELALMQAHRVNGNKWAEIAKVLPGRTDNSIKNHW 209

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: C1EGX6_MICCC (Uncharacterized protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EGX6_MICCC)

HSP 1 Score: 152 bits (384), Expect = 1.130e-38
Identity = 70/150 (46.67%), Postives = 108/150 (72.00%), Query Frame = 0

Query:  588 WTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHG-KKWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHWFAVSRGK 736
            WTP+EDD+LR+AVA++  K+WKKIA +   RT VQCL  ++ VL+P + +G W+ EED +++ELV + G K+W+KIA ++P R+GK+ RER+ NHL+P +K  EW+ +E+  L+    Q G +W++IAK   GR+ N++KNHW +  + K
Sbjct:   14 WTPDEDDILRRAVAQYKGKNWKKIAEYFEERTDVQCLHRWQKVLNPELVKGPWTKEEDDKIIELVGQLGAKQWSKIAQQLPGRIGKQCRERWYNHLNPEIKREEWSREEDRKLIIAHHQFGNRWAEIAKTFVGRTDNAIKNHWNSTLKRK 163

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BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Match: S8CXI4_9LAMI (Uncharacterized protein (Fragment) n=1 Tax=Genlisea aurea TaxID=192259 RepID=S8CXI4_9LAMI)

HSP 1 Score: 155 bits (391), Expect = 1.260e-38
Identity = 70/143 (48.95%), Postives = 104/143 (72.73%), Query Frame = 0

Query:  588 WTPEEDDVLRQAVAEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVMELVSKHGK-KWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILLEKCKQLGQQWSKIAKDLPGRSVNSVKNHW 729
            WTP+ED+ L+ AVA H  K WKKIA   P RT VQCL  ++ VL+P + +G W+ EED++++E+V+KHG  KW+ IA  +P R+GK+ RER+ NHL+P +K   W+++EE+ LL   +  G +W+++AK LPGR+ N++KNHW
Sbjct:   68 WTPDEDETLKNAVAAHKGKSWKKIAEFFPCRTEVQCLHRWQKVLNPELIKGPWTLEEDEKIVEMVAKHGPTKWSVIAKSLPGRIGKQCRERWHNHLNPEIKKDAWSLEEELTLLNAHRVHGNKWAELAKLLPGRTDNAIKNHW 210

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig268.7328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G7C1_ECTSI	2.950e-43	57.32	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S4UQ57_9EUKA	1.110e-41	51.61	Hypothetical protein (Fragment) n=1 Tax=Paramoeba ...	[more]
A0A1E7FEX6_9STRA	5.200e-41	49.33	Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fr...	[more]
A0A6H5KVQ5_9PHAE	1.650e-39	52.20	MYB protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP...	[more]
A0A7S2WMH6_9STRA	2.560e-39	47.56	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A1E7FDY8_9STRA	2.710e-39	51.05	Ternary protein-Dna Complex1 (Fragment) n=1 Tax=Fr...	[more]
A0A8N4F9T4_ELAGV	3.590e-39	51.05	transcription factor MYB3R-5 isoform X7 n=2 Tax=El...	[more]
UPI00192EEEB4	9.220e-39	50.35	transcription factor MYB3R-3-like n=1 Tax=Eucalypt...	[more]
C1EGX6_MICCC	1.130e-38	46.67	Uncharacterized protein (Fragment) n=1 Tax=Micromo...	[more]
S8CXI4_9LAMI	1.260e-38	48.95	Uncharacterized protein (Fragment) n=1 Tax=Genlise...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 584..633 e-value: 9.6E-15 score: 65.0 coord: 1242..1291 e-value: 7.4E-11 score: 52.1 coord: 636..684 e-value: 4.1E-13 score: 59.6 coord: 687..735 e-value: 3.9E-12 score: 56.3
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 689..730 e-value: 2.3E-11 score: 43.7 coord: 1244..1286 e-value: 9.4E-11 score: 41.7
None	No IPR available	PFAM	PF13921	Myb_DNA-bind_6	coord: 588..648 e-value: 1.6E-13 score: 50.7
None	No IPR available	GENE3D	1.10.10.60		coord: 1244..1294 e-value: 3.1E-14 score: 54.7 coord: 586..635 e-value: 8.1E-18 score: 66.2
None	No IPR available	GENE3D	1.10.10.60		coord: 689..748 e-value: 6.8E-12 score: 47.1
None	No IPR available	GENE3D	1.10.10.60		coord: 636..688 e-value: 2.5E-17 score: 64.4
IPR015495	Myb-like transcription factor	PANTHER	PTHR45614	FAMILY NOT NAMED	coord: 643..1089 coord: 1246..1314 coord: 588..669
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 687..737 score: 12.165
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 580..631 score: 15.917
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 1238..1293 score: 17.591
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 632..686 score: 23.108
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 1297..1316 score: 3.915
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 1239..1305
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 634..729
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 585..638

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig268	contig	H-paniculata_contig268:19113..37805 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig268.7328.1	mRNA_H-paniculata_contig268.7328.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig268 19113..37805 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig268.7328.1 ID=prot_H-paniculata_contig268.7328.1|Name=mRNA_H-paniculata_contig268.7328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1316bp
GLCDHKIINGYLRTVTSHSMIMSGSLHHHHHHHHHHNQHHHHQQQQQQRT
ESNELVDDASSLSSAPPSDCSTAVMADVPHPHEHPQQPQQSQQPHLFLNP
IIDSHTITTTNASTEGSVGISTVSSSASSVVTASSSTTSSGGGGTSVEGA
TTAIAGLEGEQRQGPLPSHLKTGDNDSTTLSVQTLPSPQHRQDMLAPGRG
QHQDHSSLSRATPPSNIIQEELPLQPQQHHQQRQSVQHHEPVAVGGGQHQ
EAHPSVVSSTPSSTQILEPQQDRHIVEHPPPPPPQSLSLHLSPTQLLQIS
STALTGPFLPPGSSIAAGVGRYALTSPVAQTLLPAQQQPMVLAGVGSSTG
NLRSSDVSRVEASGPGNHQLYYQSFSQVSGILTPSFVAPHLPSAVNALPA
AETFRLQPLQPHSLSPPSIAVTSASSMAASSAGLAVGSAEQSPVLSSMVA
EVTSSSSSPSLPPPPPSSPLPSPLPSFSSFPVQLAPILPVSQQQQQQHHH
HHHHHHHHHQQHHHHQQHNHHHPHQDQLPQQSEQKEGQRHAREEQRSVPP
GTTTGEGAEEGTDEAPDVQRPESPLNEDEVPMKGNAPWTPEEDDVLRQAV
AEHSLKHWKKIARHVPGRTAVQCLQHYKHVLDPGIERGSWSAEEDQRVME
LVSKHGKKWAKIALEMPKRLGKRIRERYVNHLDPCLKHSEWTVDEEVILL
EKCKQLGQQWSKIAKDLPGRSVNSVKNHWFAVSRGKGVLNSEGARRRHAT
GAGLAAGDGSTDAPDLDAMAADAAAAVVAAAAAAVGSGGVVHHNAACSCT
CMPHNHDAAPSNVRSDAAVVAAESDGIDGVESASRNIATPSGGSGATYSD
GDLHGDSWACVANPPVDGIADHVSNGNGDATHRNGMTVVQGSAPPPSSPS
PSPSPLSLPPQNEERTVGTGDVDMTNVPRGQGEMGGSSDGRDNGGDAKQQ
EPRVEEQALGEARDVMREEHATPTATHGEATATAASADSVTGTASGATRD
REEENMDGALGDTGGDSGVSVGEVMDGSATMQGQHQHDGLQRQQRQQPPP
LQEQKGQSHQHHDGEYGNFRHDQIHHQHQHDQQQHQQLQDKHQLQEETQQ
QHEAVEPGHDDQHDANPDHGSISGGHYPLYHHQLLHHQPQRHHHQHNLSQ
HPSHHDHHPADESVGVPISSEIGIFAASASELPQISAQIIDSTLSSPITT
AMAMDGSGMGVVGVAGGAGAVAHQHHHVRTPPIAGINSPSAQPQKWTEEQ
SMRLRNLVHEAGAKDWTNIAKKIPPKTDLQCMLRWNHVINPELTKGKGSW
KPEEDKRIIEASAEGG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR015495	Myb-like_TF
IPR017930	Myb_dom
IPR017877	Myb-like_dom
IPR009057	Homeobox-like_sf