prot_H-paniculata_contig26789.7325.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig26789.7325.1
Unique Name	prot_H-paniculata_contig26789.7325.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	148

Homology

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BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: D7FXK3_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXK3_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 1.110e-41
Identity = 91/153 (59.48%), Postives = 107/153 (69.93%), Query Frame = 0

Query:    1 QLRGLREKGVEAASFTSAAGSKAQAAKAMADLLDAGRGRRGGDELVDGEGVSSSGSRS-GKGTRT----KLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATATVAVSCSTFK 148
            QLRGL EKGVEAAS TS++ S+++AA  M D+L  G G   G    +G      G  S   G R     KLLYVTPE LA+ G+L +AL  L+ RGL+SLLAVDEAHCVS+WGHDFRPAYLELG FRK+ L+GVPCLALTATAT  V C+  K
Sbjct:   87 QLRGLYEKGVEAASLTSSSASRSRAAAVMDDILAYGGGSGSGHSTKEGVTSEKGGPNSRADGARAAPKIKLLYVTPEKLAKGGELTTALAGLAKRGLISLLAVDEAHCVSTWGHDFRPAYLELGAFRKKHLKGVPCLALTATATEEV-CADIK 238

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BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: A0A8C9TLY1_SCLFO (ATP-dependent DNA helicase n=2 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TLY1_SCLFO)

HSP 1 Score: 101 bits (252), Expect = 3.060e-22
Identity = 55/80 (68.75%), Postives = 58/80 (72.50%), Query Frame = 0

Query:   63 RTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATATVAV 142
            R KLLYVTPEML+ +      L  LS RGLVS LAVDEAHCVS WGHDFRP YL+LGE R   L GVPCLALTATA   V
Sbjct:  110 RLKLLYVTPEMLS-SASFQPCLSGLSSRGLVSYLAVDEAHCVSQWGHDFRPDYLKLGELRGL-LSGVPCLALTATAPARV 187

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BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: A0A0P7XS53_SCLFO (ATP-dependent DNA helicase (Fragment) n=3 Tax=Scleropages formosus TaxID=113540 RepID=A0A0P7XS53_SCLFO)

HSP 1 Score: 101 bits (252), Expect = 3.430e-22
Identity = 55/80 (68.75%), Postives = 58/80 (72.50%), Query Frame = 0

Query:   63 RTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATATVAV 142
            R KLLYVTPEML+ +      L  LS RGLVS LAVDEAHCVS WGHDFRP YL+LGE R   L GVPCLALTATA   V
Sbjct:  110 RLKLLYVTPEMLS-SASFQPCLSGLSSRGLVSYLAVDEAHCVSQWGHDFRPDYLKLGELRGL-LSGVPCLALTATAPARV 187

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BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: A0A0S7GWJ5_9TELE (RECQ5 (Fragment) n=3 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7GWJ5_9TELE)

HSP 1 Score: 97.1 bits (240), Expect = 4.070e-22
Identity = 51/79 (64.56%), Postives = 58/79 (73.42%), Query Frame = 0

Query:   60 KGTRTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATA 138
            K  + KLLY+TPEM+A +      L  L  RGL+S LAVDEAHCVS WGHDFRP YL+LGE R R + GVPCLALTATA
Sbjct:  108 KRPKLKLLYITPEMVA-SPSFQPCLTDLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRAR-IPGVPCLALTATA 184

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BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: UPI001A97F915 (ATP-dependent DNA helicase Q5 isoform X2 n=1 Tax=Gasterosteus aculeatus aculeatus TaxID=481459 RepID=UPI001A97F915)

HSP 1 Score: 100 bits (250), Expect = 5.130e-22
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 0

Query:   63 RTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATA 138
            + KLLY+TPEM+A +      L  L  RGL+S LAVDEAHCVS WGHDFRP YL+LGE R R LRGVPCLALTATA
Sbjct:  111 KLKLLYITPEMVA-SPSFQPCLSGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRGR-LRGVPCLALTATA 184

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BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: G3PIY1_GASAC (DNA helicase n=1 Tax=Gasterosteus aculeatus TaxID=69293 RepID=G3PIY1_GASAC)

HSP 1 Score: 100 bits (250), Expect = 6.340e-22
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 0

Query:   63 RTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATA 138
            + KLLY+TPEM+A +      L  L  RGL+S LAVDEAHCVS WGHDFRP YL+LGE R R LRGVPCLALTATA
Sbjct:  107 KLKLLYITPEMVA-SPSFQPCLSGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRGR-LRGVPCLALTATA 180

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BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: UPI001A98D5B2 (ATP-dependent DNA helicase Q5 isoform X1 n=1 Tax=Gasterosteus aculeatus aculeatus TaxID=481459 RepID=UPI001A98D5B2)

HSP 1 Score: 100 bits (250), Expect = 6.370e-22
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 0

Query:   63 RTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATA 138
            + KLLY+TPEM+A +      L  L  RGL+S LAVDEAHCVS WGHDFRP YL+LGE R R LRGVPCLALTATA
Sbjct:  111 KLKLLYITPEMVA-SPSFQPCLSGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRGR-LRGVPCLALTATA 184

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BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: UPI00188908D8 (ATP-dependent DNA helicase Q5 isoform X1 n=2 Tax=Pungitius pungitius TaxID=134920 RepID=UPI00188908D8)

HSP 1 Score: 100 bits (250), Expect = 6.390e-22
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 0

Query:   63 RTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATA 138
            + KLLY+TPEM+A +      L  L  RGL+S LAVDEAHCVS WGHDFRP YL+LGE R R LRGVPCLALTATA
Sbjct:  134 KLKLLYITPEMVA-SPSFQPCLSGLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRGR-LRGVPCLALTATA 207

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BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: A0A8C5EYA0_9TELE (ATP-dependent DNA helicase n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5EYA0_9TELE)

HSP 1 Score: 100 bits (249), Expect = 8.310e-22
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 0

Query:   63 RTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATA 138
            R KLLY+TPEM+A +      L  L  RGL+S LAVDEAHCVS WGHDFRP YL+LGE R R L+GVPCLALTATA
Sbjct:  110 RLKLLYITPEMVA-SSSFQPCLTDLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRAR-LQGVPCLALTATA 183

[Close]

BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Match: A0A8C5ENC6_9TELE (ATP-dependent DNA helicase n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5ENC6_9TELE)

HSP 1 Score: 100 bits (249), Expect = 8.690e-22
Identity = 52/76 (68.42%), Postives = 58/76 (76.32%), Query Frame = 0

Query:   63 RTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDEAHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATA 138
            R KLLY+TPEM+A +      L  L  RGL+S LAVDEAHCVS WGHDFRP YL+LGE R R L+GVPCLALTATA
Sbjct:  110 RLKLLYITPEMVA-SSSFQPCLTDLCSRGLLSYLAVDEAHCVSQWGHDFRPDYLKLGELRAR-LQGVPCLALTATA 183

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig26789.7325.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FXK3_ECTSI	1.110e-41	59.48	ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili...	[more]
A0A8C9TLY1_SCLFO	3.060e-22	68.75	ATP-dependent DNA helicase n=2 Tax=Scleropages for...	[more]
A0A0P7XS53_SCLFO	3.430e-22	68.75	ATP-dependent DNA helicase (Fragment) n=3 Tax=Scle...	[more]
A0A0S7GWJ5_9TELE	4.070e-22	64.56	RECQ5 (Fragment) n=3 Tax=Poeciliopsis prolifica Ta...	[more]
UPI001A97F915	5.130e-22	68.42	ATP-dependent DNA helicase Q5 isoform X2 n=1 Tax=G...	[more]
G3PIY1_GASAC	6.340e-22	68.42	DNA helicase n=1 Tax=Gasterosteus aculeatus TaxID=...	[more]
UPI001A98D5B2	6.370e-22	68.42	ATP-dependent DNA helicase Q5 isoform X1 n=1 Tax=G...	[more]
UPI00188908D8	6.390e-22	68.42	ATP-dependent DNA helicase Q5 isoform X1 n=2 Tax=P...	[more]
A0A8C5EYA0_9TELE	8.310e-22	68.42	ATP-dependent DNA helicase n=1 Tax=Gouania willden...	[more]
A0A8C5ENC6_9TELE	8.690e-22	68.42	ATP-dependent DNA helicase n=1 Tax=Gouania willden...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.300		coord: 1..148 e-value: 2.4E-32 score: 113.9
None	No IPR available	PANTHER	PTHR13710	DNA HELICASE RECQ FAMILY MEMBER	coord: 1..142
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 24..148 score: 12.012
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 62..139

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig26789	contig	H-paniculata_contig26789:165..2635 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig26789.7325.1	mRNA_H-paniculata_contig26789.7325.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig26789 165..2635 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig26789.7325.1 ID=prot_H-paniculata_contig26789.7325.1|Name=mRNA_H-paniculata_contig26789.7325.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=148bp
QLRGLREKGVEAASFTSAAGSKAQAAKAMADLLDAGRGRRGGDELVDGEG
VSSSGSRSGKGTRTKLLYVTPEMLARNGKLASALEALSDRGLVSLLAVDE
AHCVSSWGHDFRPAYLELGEFRKRRLRGVPCLALTATATVAVSCSTFK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014001	Helicase_ATP-bd
IPR027417	P-loop_NTPase