mRNA_H-paniculata_contig26750.7316.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: A0A6H5KPB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPB1_9PHAE) HSP 1 Score: 309 bits (791), Expect = 5.930e-97 Identity = 150/180 (83.33%), Postives = 166/180 (92.22%), Query Frame = 1
Query: 13 QPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSALQAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
QP+NLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQ LIAHLRSK VNGPFLVTAPLATLPNWV EF+KWLP VDV+LYHG+++ R ELR+T MKPR++R++ FP+VVTSYE+ I+DR+ALQ Y WQYLIIDEG RIKNASCRLV+ELKKLPSENRLLLSGTPIQNTLEE
Sbjct: 294 QPSNLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQA-TLIAHLRSKGVNGPFLVTAPLATLPNWVKEFQKWLPAVDVILYHGSKDHRSELRRTVMKPRLARSSCFPVVVTSYEVSIIDRAALQGYCWQYLIIDEGQRIKNASCRLVQELKKLPSENRLLLSGTPIQNTLEE 472
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: A0A8J2WXA1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXA1_9STRA) HSP 1 Score: 274 bits (701), Expect = 3.990e-85 Identity = 129/181 (71.27%), Postives = 151/181 (83.43%), Query Frame = 1
Query: 10 VQPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSALQAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
VQP + GGTLKPYQ+EGLRWL TL+ENGLSGILADEMGLGKTIQVIAL+AH+R KNV GP + APLATLPNW+NEFRKW P + LLYHG+++ R +LRKTAM+ FP++VTSYEICILDR+AL + ++YL+IDEG R+KN CRLVRELKKL +ENRLLLSGTPIQNTLEE
Sbjct: 153 VQPKAMTGGTLKPYQVEGLRWLATLFENGLSGILADEMGLGKTIQVIALVAHVREKNVKGPICIAAPLATLPNWMNEFRKWTPGISALLYHGSKQHRADLRKTAMRKAHQNDDDFPVIVTSYEICILDRAALSHFKFKYLVIDEGQRVKNRDCRLVRELKKLDTENRLLLSGTPIQNTLEE 333
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: A0A7S2G339_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G339_9STRA) HSP 1 Score: 273 bits (699), Expect = 1.550e-84 Identity = 129/180 (71.67%), Postives = 150/180 (83.33%), Query Frame = 1
Query: 13 QPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSALQAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
QP NL GG LKPYQLEGLRWL TLYENGLSGILADEMGLGKTIQVIALIA+LR+K V GPF+V APLATLPNW EF+KWLP V LLYHG++ R LR T M+ + +A FP+++TSYEICI+DR L+ Y+WQYLI+DEG R+KN +CRL+RELK L ++NRLLLSGTPIQNTLEE
Sbjct: 192 QPENLTGGQLKPYQLEGLRWLTTLYENGLSGILADEMGLGKTIQVIALIAYLRTKGVKGPFIVAAPLATLPNWTREFKKWLPGVQTLLYHGSKAERVHLRSTRMQLAAAASAEFPVIITSYEICIIDRRFLERYHWQYLIVDEGQRVKNRNCRLIRELKSLNTQNRLLLSGTPIQNTLEE 371
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: F0Y786_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y786_AURAN) HSP 1 Score: 272 bits (696), Expect = 2.360e-84 Identity = 127/180 (70.56%), Postives = 150/180 (83.33%), Query Frame = 1
Query: 13 QPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSALQAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
QP + GGTLKPYQ+EGLRWL TL+ENGLSGILADEMGLGKTIQVIALIAH+R KNV GP V APLATLPNW+NEF+KW+P + LLYHG+++ R +LRKTAM + FP++VTSYE+CI+DR+ L + ++YLIIDEG R+KN CRLVRELKKL +ENRLLLSGTPIQNTLEE
Sbjct: 158 QPTGMTGGTLKPYQVEGLRWLATLFENGLSGILADEMGLGKTIQVIALIAHIREKNVKGPICVAAPLATLPNWMNEFKKWVPGISALLYHGSKQHRADLRKTAMATSLQNEEDFPVIVTSYEVCIIDRAPLSHFKFKYLIIDEGQRVKNRDCRLVRELKKLNTENRLLLSGTPIQNTLEE 337
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: A0A7R9U2J9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U2J9_9STRA) HSP 1 Score: 267 bits (682), Expect = 8.400e-82 Identity = 123/180 (68.33%), Postives = 148/180 (82.22%), Query Frame = 1
Query: 13 QPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSALQAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
QP N+V GTLKPYQLEGLRWLVTL++NG+SGILADEMGLGKTIQ+IAL+AH+R KNV G FL+TAPLATLPNW+NE +KW+P + V+LYHG +E R +R T M S FP+VVTSYE+ ++DR L Y W+YLI+DEG RIKN +CRL+RELK L +ENRLLLSGTPIQN+LEE
Sbjct: 202 QPRNMVNGTLKPYQLEGLRWLVTLWQNGMSGILADEMGLGKTIQIIALLAHMREKNVKGNFLITAPLATLPNWINEMKKWVPSIPVVLYHGTKEERARMRSTRMSVSRSNAVDFPVVVTSYEMAVIDRPHLMKYAWKYLIVDEGQRIKNMNCRLIRELKMLETENRLLLSGTPIQNSLEE 381
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: A0A7S3M2I2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M2I2_9STRA) HSP 1 Score: 257 bits (656), Expect = 6.450e-81 Identity = 119/180 (66.11%), Postives = 150/180 (83.33%), Query Frame = 1
Query: 13 QPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSALQAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
QPANLVGGTL PYQ+EGL+WL++L+ENGL+GILADEMGLGKTIQ+I+LIAHLR N GP+L+ PLAT+ NWVNEFRKWLP VLLYHG++ R+ +R M R +++ +FPIV+TS+E+CI DR L+ Y WQY+I+DEGHRIKN +CRLV+ELK + S +RLLL+GTPIQN+LEE
Sbjct: 98 QPANLVGGTLMPYQIEGLQWLLSLWENGLNGILADEMGLGKTIQIISLIAHLRLNNTAGPYLIAGPLATISNWVNEFRKWLPSCPVLLYHGSKAEREAMRHKFMPVRDAKSLTFPIVITSFELCIADRPFLEQYVWQYIILDEGHRIKNRNCRLVKELKSIKSVSRLLLTGTPIQNSLEE 277
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: A0A6U1QEQ7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QEQ7_9STRA) HSP 1 Score: 261 bits (667), Expect = 1.010e-79 Identity = 120/180 (66.67%), Postives = 153/180 (85.00%), Query Frame = 1
Query: 13 QPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSALQAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
QP +V G LK YQLEGLRWL +L+ENGLSGILADEMGLGKTIQVIA +A+LR+K+V+GPFL+ APLATLPNWV EF KW+P + LLYHG++ R+ LR+T M P ++ A+FP+++TSYEIC++DR+ LQ Y W+Y++IDEG R+KN +CRL+RELK+L +E+RLLLSGTPIQNTLEE
Sbjct: 215 QPDIMVNGELKDYQLEGLRWLASLFENGLSGILADEMGLGKTIQVIAFLAYLRTKDVSGPFLIAAPLATLPNWVKEFHKWVPSMPCLLYHGSKAERETLRRTRMPPAGAKGANFPVIITSYEICMIDRTYLQNYTWKYMVIDEGQRVKNRNCRLIRELKELNTESRLLLSGTPIQNTLEE 394
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: A0A835Z5K9_9STRA (SNF2 family N-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5K9_9STRA) HSP 1 Score: 251 bits (640), Expect = 2.950e-77 Identity = 116/181 (64.09%), Postives = 146/181 (80.66%), Query Frame = 1
Query: 10 VQPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSALQAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
VQP ++ GGTLK YQ+EG+RWL+ L++NG+SGILADEMGLGKT+QVI L+ LR NV GPF++ APLATLPNWV+E RKW P + V+LYHG++ R+ LRK + P + FP+VVTSYEICI DR+ LQ Y W+Y+++DEG R+KN CRLVRELK LP+++RLLLSGTPIQNTLEE
Sbjct: 14 VQPPHMSGGTLKDYQVEGVRWLINLFQNGVSGILADEMGLGKTVQVIGLLVGLRDMNVCGPFMICAPLATLPNWVSEIRKWCPGLRVILYHGSKAEREALRKGPLNPARATDMKFPVVVTSYEICINDRAHLQHYPWKYMVVDEGQRVKNKDCRLVRELKLLPAQSRLLLSGTPIQNTLEE 194
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: A0A8K1FH34_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FH34_PYTOL) HSP 1 Score: 236 bits (602), Expect = 1.140e-70 Identity = 111/182 (60.99%), Postives = 138/182 (75.82%), Query Frame = 1
Query: 13 QPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSAL--QAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
QP L GGTL+ YQLEG+RWL L+ENGL+GILADEMGLGKTIQVI LIAHL+S V GP+L+ APL+TLPNW EF+KW P + L+YHG RE R++LRKT + FP+++TSYE+ + DR Q + W+Y+IIDEGHR+KN +C+LVRELK SENRLLL+GTP+QN L E
Sbjct: 123 QPKLLTGGTLRSYQLEGIRWLCNLFENGLNGILADEMGLGKTIQVIGLIAHLKSLGVRGPYLIVAPLSTLPNWETEFQKWAPTIPSLIYHGTRECRKQLRKTQLDKSKKNDEDFPVIITSYEMILQDRKTFDNQGFTWKYVIIDEGHRLKNMNCKLVRELKMARSENRLLLTGTPLQNNLTE 304
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Match: A0A6A5VYE9_9PLEO (ISWI chromatin-remodeling complex ATPase ISW2 n=1 Tax=Amniculicola lignicola CBS 123094 TaxID=1392246 RepID=A0A6A5VYE9_9PLEO) HSP 1 Score: 237 bits (605), Expect = 4.930e-70 Identity = 110/180 (61.11%), Postives = 141/180 (78.33%), Query Frame = 1
Query: 13 QPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIALIAHLRSKNVNGPFLVTAPLATLPNWVNEFRKWLPCVDVLLYHGNRERRQELRKTAMKPRMSRTASFPIVVTSYEICILDRSALQAYNWQYLIIDEGHRIKNASCRLVRELKKLPSENRLLLSGTPIQNTLEE 552
QP + GGT++ YQLEGL W+++LYENG++GILADEMGLGKTIQ IAL+AHL K GPFLV APL+T NWV EFRKW P + VLLYHG+++ R+ LR+T +K T +FP+V+TSYEIC+ DR L + WQ++IIDEGHRIKN CRL+REL++ S NRLL++GTP+QN L+E
Sbjct: 210 QPRLVTGGTMRSYQLEGLEWMLSLYENGINGILADEMGLGKTIQTIALLAHLWEKKSYGPFLVAAPLSTTSNWVEEFRKWTPSIPVLLYHGDKKERERLRRTELKN--PGTENFPVVITSYEICMNDRKFLTGFGWQFIIIDEGHRIKNLDCRLIRELQQYQSANRLLITGTPLQNNLQE 387 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26750.7316.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig26750.7316.1 >prot_H-paniculata_contig26750.7316.1 ID=prot_H-paniculata_contig26750.7316.1|Name=mRNA_H-paniculata_contig26750.7316.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=184bp MCRVQPANLVGGTLKPYQLEGLRWLVTLYENGLSGILADEMGLGKTIQVIback to top mRNA from alignment at H-paniculata_contig26750:93..3216+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig26750.7316.1 ID=mRNA_H-paniculata_contig26750.7316.1|Name=mRNA_H-paniculata_contig26750.7316.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3124bp|location=Sequence derived from alignment at H-paniculata_contig26750:93..3216+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig26750:93..3216+ >mRNA_H-paniculata_contig26750.7316.1 ID=mRNA_H-paniculata_contig26750.7316.1|Name=mRNA_H-paniculata_contig26750.7316.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1104bp|location=Sequence derived from alignment at H-paniculata_contig26750:93..3216+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |