prot_H-paniculata_contig26738.7311.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig26738.7311.1
Unique Nameprot_H-paniculata_contig26738.7311.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length162
Homology
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: A0A8F0F7E6_9PHAE (Ribosomal protein n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7E6_9PHAE)

HSP 1 Score: 287 bits (735), Expect = 1.160e-96
Identity = 138/155 (89.03%), Postives = 150/155 (96.77%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLKN 161
            VLMPL+GI Q+YK+LADI+GSDDLIELI KGN+DFDILISTPDMMPKLAKLGR+LGPKGLMPSPKAGTVTTDI LTLEEFK+GKLEYRADKTGIVHLLIGKSDFTN DLLDNL A+YTSIENNKPPGVKGQYFKTFHLCSTMGPS+EIDI++LK+
Sbjct:   76 VLMPLDGITQEYKELADIIGSDDLIELIAKGNIDFDILISTPDMMPKLAKLGRVLGPKGLMPSPKAGTVTTDIRLTLEEFKRGKLEYRADKTGIVHLLIGKSDFTNSDLLDNLTAIYTSIENNKPPGVKGQYFKTFHLCSTMGPSIEIDISELKS 230          
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: D1J715_ECTSI (50S ribosomal protein L1, chloroplastic n=3 Tax=Ectocarpales TaxID=2877 RepID=D1J715_ECTSI)

HSP 1 Score: 274 bits (701), Expect = 1.740e-91
Identity = 133/154 (86.36%), Postives = 147/154 (95.45%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLK 160
            VLMPLE I  +YKDLADI+GSDDLIE ITKG+L+FDILI+TPDMMPKLAKLGRILGPKGLMPSPKAGTVTTD++LTLEEFKKGKLEYRADKTGIVHLLIGKS+FT+ DLL+NL AVY SIENNKPPGVKG+YFKTFH+CSTMGPS+EIDI+DLK
Sbjct:   76 VLMPLETITSEYKDLADIIGSDDLIETITKGDLNFDILIATPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDVMLTLEEFKKGKLEYRADKTGIVHLLIGKSNFTDSDLLENLVAVYNSIENNKPPGVKGRYFKTFHICSTMGPSIEIDISDLK 229          
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: A0A0R6MAX7_UNDPI (50S ribosomal protein L1, chloroplastic n=33 Tax=Phaeophyceae TaxID=2870 RepID=A0A0R6MAX7_UNDPI)

HSP 1 Score: 273 bits (698), Expect = 4.990e-91
Identity = 132/154 (85.71%), Postives = 147/154 (95.45%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLK 160
            VLMPLE I  +YK+LADI+GSDDLIE+ITKG+++FDILI+TPDMMPKLAKLGRILGPKGLMPSPKAGTVTTD+ LTLEEFKKGKLEYRADKTGIVHLLIGKSDFT+ DLL+NL AVYTSIENNKPPGVKG+YFKTFH+CSTMGPS+EIDI+ LK
Sbjct:   76 VLMPLESITPEYKELADIIGSDDLIEIITKGDINFDILIATPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDVKLTLEEFKKGKLEYRADKTGIVHLLIGKSDFTDSDLLENLIAVYTSIENNKPPGVKGRYFKTFHICSTMGPSIEIDISTLK 229          
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: A0A8F0F9R0_9PHAE (Ribosomal protein n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9R0_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 1.660e-89
Identity = 132/154 (85.71%), Postives = 146/154 (94.81%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLK 160
            VLMPLE I  +YK+LADIVGSDDLIE+ITKG+L+FDILI+TPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDI LTLEEFKKGKLEYRADKTGIVHLLIGKS+F + DLL+NL AVYTSIENNKPPGVKG+YFKTFH+CSTMGPS+EID++ LK
Sbjct:   76 VLMPLETITPEYKELADIVGSDDLIEMITKGDLNFDILIATPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIKLTLEEFKKGKLEYRADKTGIVHLLIGKSNFADSDLLENLVAVYTSIENNKPPGVKGRYFKTFHICSTMGPSIEIDLSTLK 229          
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: A0A6B7EV19_9PHAE (Ribosomal protein n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EV19_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 7.570e-88
Identity = 127/154 (82.47%), Postives = 144/154 (93.51%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLK 160
            VLMPLE I  +Y++LAD++GSDDLIE ITKG LDFDILI+TPDMMPKLAKLGRILGPKGLMPSPKAGTVTTD+ +TLEEFKKGKLEYRADKTGIVHL+IGKS+FT+ DLL+NL AVY SIENNKPPGVKG+YFKTFH+CSTMGPS+E+DI+ LK
Sbjct:   76 VLMPLEAITPEYQNLADVIGSDDLIETITKGGLDFDILIATPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDVKVTLEEFKKGKLEYRADKTGIVHLMIGKSNFTDSDLLENLLAVYKSIENNKPPGVKGRYFKTFHICSTMGPSIELDISTLK 229          
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: A0A8F0F916_9PHAE (Ribosomal protein n=1 Tax=Postelsia palmaeformis TaxID=105414 RepID=A0A8F0F916_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 1.110e-87
Identity = 128/154 (83.12%), Postives = 144/154 (93.51%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLK 160
            VLMPLE I  +YK+LAD++GSDDLIE ITKG+++FDILI+TPDMMPKLAKLGRILGPKGLMPSPKAGTVTTD+ LTLEEFKKGKLEYRADKTGIVHLLIGKS+F + DLL+NL AVYTSIENNKPPGVKG+YFKTFH+CSTMGP++EIDI  LK
Sbjct:   76 VLMPLESITPEYKELADLIGSDDLIETITKGDINFDILIATPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDVKLTLEEFKKGKLEYRADKTGIVHLLIGKSNFADSDLLENLFAVYTSIENNKPPGVKGRYFKTFHICSTMGPAIEIDIAALK 229          
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: A0A8F0JZW3_9PHAE (Ribosomal protein n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZW3_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 4.280e-85
Identity = 124/154 (80.52%), Postives = 139/154 (90.26%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLK 160
            VLMPLE I  +YK LADI+GSDDLIE ITKG ++FDILI+TPDMMPKLAKLGRILGPKGLMPSPKAGTVTTD+ LTLEEFKKGK+EYRADKTGIVHLL+GKSDF   DLL+NL  VY SIENNKPPGVKG+YFKTF++CSTMGP++EIDI+  K
Sbjct:   76 VLMPLESITPEYKQLADIIGSDDLIETITKGQINFDILIATPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDVKLTLEEFKKGKVEYRADKTGIVHLLLGKSDFPEEDLLENLETVYNSIENNKPPGVKGRYFKTFYICSTMGPAIEIDISAFK 229          
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: A0A6P0NJL1_9CYAN (50S ribosomal protein L1 n=1 Tax=Moorena sp. SIO3C2 TaxID=2607842 RepID=A0A6P0NJL1_9CYAN)

HSP 1 Score: 253 bits (645), Expect = 5.580e-83
Identity = 119/154 (77.27%), Postives = 141/154 (91.56%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLK 160
            VLMP E I  +YK LAD+VGS+DLI+LI +GNLDFDIL+STPDMMPKLAK+GRILGP+GLMPSPKAGTVT DI +TLEEFKKGKLEYRADKTGIVHLLIGKS+FTN DLL+NL ++YTS+ENN+P GVKG+YFKTFH+CSTMGPS+++D++  K
Sbjct:   76 VLMPAESITPEYKLLADLVGSEDLIDLINQGNLDFDILLSTPDMMPKLAKVGRILGPRGLMPSPKAGTVTNDIKITLEEFKKGKLEYRADKTGIVHLLIGKSNFTNSDLLENLISIYTSLENNRPSGVKGKYFKTFHICSTMGPSIQLDLSTFK 229          
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: A0A141BSK4_9PHAE (50S ribosomal protein L1, chloroplastic n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSK4_9PHAE)

HSP 1 Score: 249 bits (635), Expect = 1.850e-81
Identity = 122/154 (79.22%), Postives = 139/154 (90.26%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLK 160
            VL+  E I  +Y +LADI+GSDDLIE IT+G LDFDILI+TPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDI LTL+EFKKGK+EYRADKTGIVHLLIGKS+FT  DLL+NL A+YTSIENNKP GVKG+YFKTFH+ STMGPS+++DI+ LK
Sbjct:   76 VLISSEAIKPEYLELADIIGSDDLIETITRGELDFDILIATPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIGLTLQEFKKGKVEYRADKTGIVHLLIGKSNFTESDLLENLVAIYTSIENNKPVGVKGRYFKTFHVSSTMGPSIQLDISTLK 229          
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Match: A0A2I4Q2L5_9PHAE (50S ribosomal protein L1, chloroplastic n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2L5_9PHAE)

HSP 1 Score: 246 bits (629), Expect = 1.560e-80
Identity = 118/154 (76.62%), Postives = 139/154 (90.26%), Query Frame = 0
Query:    7 VLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDMMPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGIVHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGPSVEIDINDLK 160
            +LMP E I  +YK L DIVGS+DLIELI+KG L+FDIL+STPDMMPKLAK+GRILGPKGLMPSPKAGT+T+DI +TLEEFKKGKLEYRADKTGIVHL+IGKS+FTN DLL+NL A+YTS+E N+P GVKG+YFKTF+LCSTMGPS+ +DI+  K
Sbjct:   76 LLMPFESITPEYKTLTDIVGSEDLIELISKGILNFDILLSTPDMMPKLAKVGRILGPKGLMPSPKAGTITSDIKVTLEEFKKGKLEYRADKTGIVHLIIGKSNFTNSDLLENLMAIYTSLEMNRPSGVKGRYFKTFYLCSTMGPSIPLDISTFK 229          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig26738.7311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8F0F7E6_9PHAE1.160e-9689.03Ribosomal protein n=1 Tax=Protohalopteris sp. TaxI... [more]
D1J715_ECTSI1.740e-9186.3650S ribosomal protein L1, chloroplastic n=3 Tax=Ec... [more]
A0A0R6MAX7_UNDPI4.990e-9185.7150S ribosomal protein L1, chloroplastic n=33 Tax=P... [more]
A0A8F0F9R0_9PHAE1.660e-8985.71Ribosomal protein n=1 Tax=Chorda asiatica TaxID=12... [more]
A0A6B7EV19_9PHAE7.570e-8882.47Ribosomal protein n=1 Tax=Cladosiphon okamuranus T... [more]
A0A8F0F916_9PHAE1.110e-8783.12Ribosomal protein n=1 Tax=Postelsia palmaeformis T... [more]
A0A8F0JZW3_9PHAE4.280e-8580.52Ribosomal protein n=1 Tax=Desmarestia aculeata Tax... [more]
A0A6P0NJL1_9CYAN5.580e-8377.2750S ribosomal protein L1 n=1 Tax=Moorena sp. SIO3C... [more]
A0A141BSK4_9PHAE1.850e-8179.2250S ribosomal protein L1, chloroplastic n=15 Tax=S... [more]
A0A2I4Q2L5_9PHAE1.560e-8076.6250S ribosomal protein L1, chloroplastic n=1 Tax=Di... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 19..76
e-value: 3.3E-14
score: 54.1
NoneNo IPR availableGENE3D3.30.190.20coord: 77..161
e-value: 2.7E-25
score: 90.5
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 20..160
NoneNo IPR availablePANTHERPTHR23105:SF115coord: 20..160
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 21..150
e-value: 7.2E-33
score: 114.0
IPR023673Ribosomal protein L1, conserved sitePROSITEPS01199RIBOSOMAL_L1coord: 51..69
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 22..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig26738contigH-paniculata_contig26738:2438..2923 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig26738.7311.1mRNA_H-paniculata_contig26738.7311.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig26738 2223..2923 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig26738.7311.1 ID=prot_H-paniculata_contig26738.7311.1|Name=mRNA_H-paniculata_contig26738.7311.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp
MPLEGIVLMPLEGIPQKYKDLADIVGSDDLIELITKGNLDFDILISTPDM
MPKLAKLGRILGPKGLMPSPKAGTVTTDIILTLEEFKKGKLEYRADKTGI
VHLLIGKSDFTNLDLLDNLNAVYTSIENNKPPGVKGQYFKTFHLCSTMGP
SVEIDINDLKN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016095Ribosomal_L1_3-a/b-sand
IPR028364Ribosomal_L1/biogenesis
IPR023673Ribosomal_L1_CS
IPR023674Ribosomal_L1-like