prot_H-paniculata_contig26718.7307.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig26718.7307.1
Unique Name	prot_H-paniculata_contig26718.7307.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	193

Homology

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BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: D8LNP1_ECTSI (Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNP1_ECTSI)

HSP 1 Score: 347 bits (890), Expect = 4.760e-117
Identity = 175/193 (90.67%), Postives = 184/193 (95.34%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK 193
            SLYCAP+EKFG+ EQK EHL PFASGA LGCFALSEPGNGSDAGAARTTARL+GD+WVLDGTKAWITNA+DAQSS+VFATTDSSKKHKGISAFIVPL+ PGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGE GMGFK+AMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFG+PI  LYAIQ K
Sbjct:  122 SLYCAPIEKFGSPEQKDEHLKPFASGASLGCFALSEPGNGSDAGAARTTARLEGDQWVLDGTKAWITNAHDAQSSIVFATTDSSKKHKGISAFIVPLETPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEEGMGFKIAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGQPICGLYAIQSK 314

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BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: A0A7S1NP91_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NP91_9EUGL)

HSP 1 Score: 293 bits (750), Expect = 1.280e-95
Identity = 148/193 (76.68%), Postives = 163/193 (84.46%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK 193
            SLYCAPV  FGT  QK E L PFASG KLGCF LSEPGNGSDAGAA TTA +DGD WVL+GTKAWITNA+DA +++VFATT+ S KHKGISAFIVP D  G S+G KEDKLGIRASST NLIME CRVPKANLLG+ G GFK+AM TLD GRIGIAGQALGIA AS+DCA KY++ERK+FG PIS LYAIQ+K
Sbjct:  126 SLYCAPVAAFGTDAQKAEFLTPFASGEKLGCFGLSEPGNGSDAGAASTTATVDGDSWVLNGTKAWITNAHDAHAAIVFATTNKSLKHKGISAFIVPTDTTGFSVGAKEDKLGIRASSTGNLIMEDCRVPKANLLGQEGEGFKIAMWTLDGGRIGIAGQALGIAQASVDCAAKYALERKAFGAPISKLYAIQLK 318

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BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: U3J8W0_ANAPP (Acyl-CoA dehydrogenase short chain n=6 Tax=Aves TaxID=8782 RepID=U3J8W0_ANAPP)

HSP 1 Score: 288 bits (737), Expect = 2.280e-94
Identity = 143/193 (74.09%), Postives = 165/193 (85.49%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK 193
            SLY  P+ KFG+ EQK + + PF SG K+GCFALSEPGNGSDAGAA T ARLDGDEWVL+GTKAWITNA+DA ++VVFATTD + KHKGISAF+VP+  PG+SLGKKEDKLGIRASSTANLI E CR+PKANLLG++GMGFK+AM TLDAGRIGIA QALGIA A+LDCAV Y+ +R +FG PI+ L AIQ K
Sbjct:   84 SLYLGPILKFGSEEQKHQWIAPFTSGEKIGCFALSEPGNGSDAGAATTVARLDGDEWVLNGTKAWITNAWDASAAVVFATTDKALKHKGISAFLVPMPTPGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQLGMGFKIAMQTLDAGRIGIASQALGIAQAALDCAVDYAEKRTAFGSPITKLQAIQFK 276

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BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: A0A093HYG1_STRCA (Uncharacterized protein (Fragment) n=3 Tax=Sauria TaxID=32561 RepID=A0A093HYG1_STRCA)

HSP 1 Score: 286 bits (732), Expect = 4.620e-94
Identity = 143/193 (74.09%), Postives = 164/193 (84.97%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK 193
            SLY  P+ KFG+ EQKQ+ + PF  G K+GCFALSEPGNGSDAGAA TTARLDGDEWVL+GTKAWITNA+DA ++VVFATTD S KHKGISAF+VP+   G+SLGKKEDKLGIRASSTANLI E CR+PKANLLG+ GMGFK+AM TLDAGRIGIA QALGIA A+LDCAV Y+ +R +FG PI+ L A+Q K
Sbjct:   51 SLYLGPILKFGSEEQKQKWIAPFTGGDKIGCFALSEPGNGSDAGAASTTARLDGDEWVLNGTKAWITNAWDASATVVFATTDKSLKHKGISAFLVPMPTAGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQQGMGFKIAMQTLDAGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAVQFK 243

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BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: A0A8C0VHV1_CYACU (Acyl-CoA dehydrogenase short chain n=1 Tax=Cyanistes caeruleus TaxID=156563 RepID=A0A8C0VHV1_CYACU)

HSP 1 Score: 286 bits (732), Expect = 6.550e-94
Identity = 142/193 (73.58%), Postives = 163/193 (84.46%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK 193
            SLY  P+ KFG+ EQK + + PF SG K+GCFALSEPGNGSDAGAA T ARLDGDEWVL+GTKAWITNA+DA ++VVFATTD S KHKGISAF+VP+  PG+SLGKKEDKLGIRASSTANLI E CR+PKANLLG+ GMGFK+AM TLD GRIGIA QALGIA A+LDCAV Y+ +R +FG PI+ L A+Q K
Sbjct:   82 SLYLGPILKFGSEEQKHQWIAPFTSGEKIGCFALSEPGNGSDAGAASTVARLDGDEWVLNGTKAWITNAWDASATVVFATTDKSLKHKGISAFLVPMPTPGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQPGMGFKIAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAVQFK 274

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BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: UPI00093AE384 (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2 n=1 Tax=Crocodylus porosus TaxID=8502 RepID=UPI00093AE384)

HSP 1 Score: 283 bits (725), Expect = 9.300e-94
Identity = 142/193 (73.58%), Postives = 163/193 (84.46%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK 193
            SLY  PV KFG+ EQK + + PF SG K+GCFALSEPGNGSDAGAA T A LDGDEWVL+GTKAWITNA+DA + VVFATTD S+KHKGISAF+VP+  PG+SLGKKEDKLGIRASSTANLI E CR+PKANLLG++GMGFK+AM TLD GRIGIA QALGIA A+LDCAV Y+ +R +FG PI+ L AIQ +
Sbjct:    6 SLYLGPVLKFGSEEQKHKWIAPFTSGDKIGCFALSEPGNGSDAGAASTVASLDGDEWVLNGTKAWITNAWDASAVVVFATTDKSQKHKGISAFLVPMPTPGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQLGMGFKIAMQTLDTGRIGIASQALGIAQAALDCAVDYAEKRVAFGSPITKLQAIQAE 198

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BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: UPI00163B9025 (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2 n=1 Tax=Egretta garzetta TaxID=188379 RepID=UPI00163B9025)

HSP 1 Score: 284 bits (726), Expect = 9.720e-94
Identity = 141/191 (73.82%), Postives = 163/191 (85.34%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQ 191
            SLY  P+ KFG+ EQK + + PF SG K+GCFALSEPGNGSDAGAA T ARLDGDEWVL+GTKAWITNA+DA ++VVFATTD S KHKGISAF+VP+   G+SLGKKEDKLGIRASSTANLI E CR+PKANLLG++GMGFK+AM TLDAGRIGIA QALGIA A+LDCAV Y+ +R +FG PI+ L A+Q
Sbjct:   82 SLYLGPILKFGSEEQKHKWIAPFTSGEKIGCFALSEPGNGSDAGAASTVARLDGDEWVLNGTKAWITNAWDASATVVFATTDKSLKHKGISAFLVPMPTAGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQLGMGFKIAMQTLDAGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAVQ 272

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BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: UPI00071A9C02 (short-chain specific acyl-CoA dehydrogenase, mitochondrial isoform X2 n=1 Tax=Sturnus vulgaris TaxID=9172 RepID=UPI00071A9C02)

HSP 1 Score: 286 bits (731), Expect = 1.270e-93
Identity = 142/193 (73.58%), Postives = 163/193 (84.46%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK 193
            SLY  P+ KFG+ EQK + + PF SG K+GCFALSEPGNGSDAGAA T ARLDGDEWVL+GTKAWITNA+DA ++VVFATTD S KHKGISAF+VP+  PG+SLGKKEDKLGIRASSTANLI E CR+PKANLLG+ GMGFK+AM TLD GRIGIA QALGIA A+LDCAV Y+ +R +FG PI+ L A+Q K
Sbjct:  119 SLYLGPILKFGSEEQKHQWIAPFTSGEKIGCFALSEPGNGSDAGAASTMARLDGDEWVLNGTKAWITNAWDASATVVFATTDKSLKHKGISAFLVPMPTPGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQPGMGFKIAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAVQFK 311

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BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: A0A6J3DW88_AYTFU (short-chain specific acyl-CoA dehydrogenase, mitochondrial n=4 Tax=Neognathae TaxID=8825 RepID=A0A6J3DW88_AYTFU)

HSP 1 Score: 287 bits (734), Expect = 1.950e-93
Identity = 142/193 (73.58%), Postives = 165/193 (85.49%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK 193
            SLY  P+ KFG+ EQK + + PF SG K+GCFALSEPGNGSDAGAA T ARLDGDEWVL+GTKAWITNA+DA ++VVFATTD + KH+GISAF+VP+  PG+SLGKKEDKLGIRASSTANLI E CR+PKANLLG++GMGFK+AM TLDAGRIGIA QALGIA A+LDCAV Y+ +R +FG PI+ L AIQ K
Sbjct:  120 SLYLGPILKFGSEEQKHQWIAPFTSGEKIGCFALSEPGNGSDAGAATTVARLDGDEWVLNGTKAWITNAWDASAAVVFATTDKALKHRGISAFLVPMPTPGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQLGMGFKIAMQTLDAGRIGIASQALGIAQAALDCAVDYAEKRTAFGSPITKLQAIQFK 312

[Close]

BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Match: A0A7K4TWM6_9SYLV (ACADS protein (Fragment) n=11 Tax=Archelosauria TaxID=1329799 RepID=A0A7K4TWM6_9SYLV)

HSP 1 Score: 286 bits (732), Expect = 2.000e-93
Identity = 142/193 (73.58%), Postives = 163/193 (84.46%), Query Frame = 0

Query:    1 SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTARLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAPGMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDAGRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK 193
            SLY  P+ KFG+ EQK + + PF SG K+GCFALSEPGNGSDAGAA T ARLDGDEWVL+GTKAWITNA+DA ++VVFATTD S KHKGISAF+VP+  PG+SLGKKEDKLGIRASSTANLI E CR+PKANLLG+ GMGFK+AM TLD GRIGIA QALGIA A+LDCAV Y+ +R +FG PI+ L A+Q K
Sbjct:   99 SLYLGPILKFGSEEQKHQWIAPFTSGEKIGCFALSEPGNGSDAGAASTVARLDGDEWVLNGTKAWITNAWDASATVVFATTDKSLKHKGISAFLVPMPTPGLSLGKKEDKLGIRASSTANLIFEDCRIPKANLLGQPGMGFKIAMQTLDGGRIGIASQALGIAQAALDCAVDYAEKRMAFGSPITKLQAVQFK 291

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig26718.7307.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LNP1_ECTSI	4.760e-117	90.67	Acyl-CoA dehydrogenase n=2 Tax=Ectocarpus TaxID=28...	[more]
A0A7S1NP91_9EUGL	1.280e-95	76.68	Hypothetical protein n=1 Tax=Eutreptiella gymnasti...	[more]
U3J8W0_ANAPP	2.280e-94	74.09	Acyl-CoA dehydrogenase short chain n=6 Tax=Aves Ta...	[more]
A0A093HYG1_STRCA	4.620e-94	74.09	Uncharacterized protein (Fragment) n=3 Tax=Sauria ...	[more]
A0A8C0VHV1_CYACU	6.550e-94	73.58	Acyl-CoA dehydrogenase short chain n=1 Tax=Cyanist...	[more]
UPI00093AE384	9.300e-94	73.58	short-chain specific acyl-CoA dehydrogenase, mitoc...	[more]
UPI00163B9025	9.720e-94	73.82	short-chain specific acyl-CoA dehydrogenase, mitoc...	[more]
UPI00071A9C02	1.270e-93	73.58	short-chain specific acyl-CoA dehydrogenase, mitoc...	[more]
A0A6J3DW88_AYTFU	1.950e-93	73.58	short-chain specific acyl-CoA dehydrogenase, mitoc...	[more]
A0A7K4TWM6_9SYLV	2.000e-93	73.58	ACADS protein (Fragment) n=11 Tax=Archelosauria Ta...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037069	Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily	GENE3D	1.10.540.10		coord: 2..29 e-value: 3.6E-65 score: 222.0
None	No IPR available	GENE3D	2.40.110.10		coord: 30..137 e-value: 3.6E-65 score: 222.0
None	No IPR available	GENE3D	1.20.140.10		coord: 138..192 e-value: 3.6E-65 score: 222.0
None	No IPR available	PANTHER	PTHR43884:SF12	SHORT-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL	coord: 1..193
None	No IPR available	PANTHER	PTHR43884	FAMILY NOT NAMED	coord: 1..193
IPR006091	Acyl-CoA oxidase/dehydrogenase, central domain	PFAM	PF02770	Acyl-CoA_dh_M	coord: 31..126 e-value: 1.3E-25 score: 89.4
IPR009075	Acyl-CoA dehydrogenase/oxidase C-terminal	PFAM	PF00441	Acyl-CoA_dh_1	coord: 138..192 e-value: 4.5E-11 score: 43.2
IPR006089	Acyl-CoA dehydrogenase, conserved site	PROSITE	PS00072	ACYL_COA_DH_1	coord: 33..45
IPR036250	Acyl-CoA dehydrogenase-like, C-terminal	SUPERFAMILY	47203	Acyl-CoA dehydrogenase C-terminal domain-like	coord: 136..192
IPR009100	Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily	SUPERFAMILY	56645	Acyl-CoA dehydrogenase NM domain-like	coord: 2..150

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig26718	contig	H-paniculata_contig26718:543..3184 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig26718.7307.1	mRNA_H-paniculata_contig26718.7307.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig26718 543..3184 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig26718.7307.1 ID=prot_H-paniculata_contig26718.7307.1|Name=mRNA_H-paniculata_contig26718.7307.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=193bp
SLYCAPVEKFGTSEQKQEHLVPFASGAKLGCFALSEPGNGSDAGAARTTA
RLDGDEWVLDGTKAWITNAYDAQSSVVFATTDSSKKHKGISAFIVPLDAP
GMSLGKKEDKLGIRASSTANLIMEGCRVPKANLLGEVGMGFKVAMGTLDA
GRIGIAGQALGIAAASLDCAVKYSMERKSFGKPISDLYAIQVK

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037069	AcylCoA_DH/ox_N_sf
IPR006091	Acyl-CoA_Oxase/DH_cen-dom
IPR009075	AcylCo_DH/oxidase_C
IPR006089	Acyl-CoA_DH_CS
IPR036250	AcylCo_DH-like_C
IPR009100	AcylCoA_DH/oxidase_NM_dom