prot_H-paniculata_contig2671.7305.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig2671.7305.1
Unique Nameprot_H-paniculata_contig2671.7305.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length86
Homology
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A6H5L128_9PHAE (COX assembly mitochondrial protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L128_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 5.230e-29
Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFDEEFERELERSRREKEAAQ 83
            MHPPLLRPHP C EE+K LM CHE+NPY KFFGACN+ K  LD CF +EKE+ RR N  KAR+FD  F++ELE  R+E E  Q
Sbjct:    1 MHPPLLRPHPSCHEEVKMLMACHEENPYGKFFGACNDLKLALDSCFVLEKEEKRRKNLAKARRFDAGFQKELELRRKELEQEQ 83          
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A484DYF6_BRELC (COX assembly mitochondrial protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYF6_BRELC)

HSP 1 Score: 89.0 bits (219), Expect = 2.400e-21
Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 65
            MH PL RPHP+CQ EIKAL+DCHE NPY KFFGAC++ KT LD CF  EK + R  N ++A+  D
Sbjct:    1 MHAPLDRPHPDCQAEIKALLDCHENNPYAKFFGACSDAKTALDKCFKAEKVRIRSENFKRAKASD 65          
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A225VCF9_9STRA (COX assembly mitochondrial protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VCF9_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 6.140e-21
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 65
            MH PL RPHP+CQ EIKAL++CH++NPY KFFGAC E KT LD+CF  EK + R  N + A+  D
Sbjct:    1 MHTPLDRPHPDCQTEIKALLECHDENPYAKFFGACGEIKTALDICFREEKNRIRSENFKHAKASD 65          
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A2P4XXV8_9STRA (COX assembly mitochondrial protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XXV8_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 7.240e-21
Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 65
            MH PL RPHP+CQ EIKAL++CHE NPY KFFGAC + KT LD+CF  EK + R  N + A+  D
Sbjct:    1 MHTPLDRPHPDCQTEIKALLECHESNPYAKFFGACGDVKTALDICFREEKNRIRSENFKHAKASD 65          
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A3M6VJT8_9STRA (COX assembly mitochondrial protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJT8_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.030e-21
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 65
            MH PL RPHP+CQ EIKAL+ CH+ NPY KFFGAC++ KT LD CF  EKE+ R  N ++A+  D
Sbjct:    1 MHTPLDRPHPDCQSEIKALLQCHDNNPYAKFFGACSDVKTALDWCFKHEKERIRAENLKRAKASD 65          
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: G4ZUD5_PHYSP (COX assembly mitochondrial protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZUD5_PHYSP)

HSP 1 Score: 86.7 bits (213), Expect = 2.310e-20
Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 65
            MH PL RPHP+CQ EIKAL++CHE+NPY KFFGAC + KT LD CF  EK + R  N ++A+  D
Sbjct:    1 MHTPLDRPHPDCQAEIKALLECHEENPYAKFFGACGDVKTALDWCFREEKVRIRSENFQRAKASD 65          
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A6A3SY18_9STRA (COX assembly mitochondrial protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SY18_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 3.020e-20
Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 65
            MH PL RPHP+CQ EIKAL++CH++NPY KFFGAC E KT LD CF  EK + R  N + A+  D
Sbjct:    1 MHTPLDRPHPDCQAEIKALLECHDENPYAKFFGACGEVKTALDWCFRQEKTRIRSENFKHAKASD 65          
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: W2G7J4_PHYPR (COX assembly mitochondrial protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2G7J4_PHYPR)

HSP 1 Score: 85.9 bits (211), Expect = 4.400e-20
Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 65
            MH PL RPHP+CQ EIKAL++CHE NPY KFFGAC E KT LD CF  EK + R  N + A+  D
Sbjct:    1 MHAPLDRPHPDCQAEIKALLECHENNPYAKFFGACGEVKTALDHCFKNEKIRMRSENFKHAKASD 65          
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A0P1AB85_PLAHL (COX assembly mitochondrial protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB85_PLAHL)

HSP 1 Score: 84.0 bits (206), Expect = 1.930e-19
Identity = 39/65 (60.00%), Postives = 45/65 (69.23%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 65
            MH PL RPHP+CQ EIKAL+DCH  NPY KFFGACN+ K+ LD CF  EK + R  N   A+  D
Sbjct:    1 MHAPLDRPHPDCQIEIKALLDCHNDNPYAKFFGACNDVKSALDQCFKKEKIRIRSENLRHAKASD 65          
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A5D6XZ17_9STRA (COX assembly mitochondrial protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ17_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 4.330e-19
Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 0
Query:    1 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 65
            MH PL RPHPECQE I AL  CHE+NP  KFFGACNE K  LD+CF  EK + R  N ++A++ D
Sbjct:    1 MHAPLERPHPECQEVIAALNRCHEENPRLKFFGACNEAKNELDLCFKAEKVRKRSENFKRAKESD 65          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5L128_9PHAE5.230e-2963.86COX assembly mitochondrial protein n=1 Tax=Ectocar... [more]
A0A484DYF6_BRELC2.400e-2161.54COX assembly mitochondrial protein n=1 Tax=Bremia ... [more]
A0A225VCF9_9STRA6.140e-2160.00COX assembly mitochondrial protein n=1 Tax=Phytoph... [more]
A0A2P4XXV8_9STRA7.240e-2160.00COX assembly mitochondrial protein n=1 Tax=Phytoph... [more]
A0A3M6VJT8_9STRA8.030e-2160.00COX assembly mitochondrial protein n=1 Tax=Peronos... [more]
G4ZUD5_PHYSP2.310e-2060.00COX assembly mitochondrial protein n=1 Tax=Phytoph... [more]
A0A6A3SY18_9STRA3.020e-2060.00COX assembly mitochondrial protein n=2 Tax=Phytoph... [more]
W2G7J4_PHYPR4.400e-2061.54COX assembly mitochondrial protein n=16 Tax=Phytop... [more]
A0A0P1AB85_PLAHL1.930e-1960.00COX assembly mitochondrial protein n=1 Tax=Plasmop... [more]
A0A5D6XZ17_9STRA4.330e-1960.00COX assembly mitochondrial protein n=1 Tax=Pythium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..85
NoneNo IPR availablePANTHERPTHR22977:SF1COX ASSEMBLY MITOCHONDRIAL PROTEIN 2 HOMOLOGcoord: 1..78
NoneNo IPR availablePROSITEPS51808CHCHcoord: 9..53
score: 11.316
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePFAMPF08583Cmc1coord: 9..68
e-value: 1.9E-11
score: 43.8
IPR013892Cytochrome c oxidase biogenesis protein Cmc1-likePANTHERPTHR22977COX ASSEMBLY MITOCHONDRIAL PROTEINcoord: 1..78

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig2671contigH-paniculata_contig2671:9892..13877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig2671.7305.1mRNA_H-paniculata_contig2671.7305.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig2671 8995..13973 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig2671.7305.1 ID=prot_H-paniculata_contig2671.7305.1|Name=mRNA_H-paniculata_contig2671.7305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp
MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEK
EKSRRANSEKARKFDEEFERELERSRREKEAAQTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013892Cyt_c_biogenesis_Cmc1-like