mRNA_H-paniculata_contig2671.7305.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A6H5L128_9PHAE (COX assembly mitochondrial protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L128_9PHAE) HSP 1 Score: 111 bits (277), Expect = 1.960e-26 Identity = 53/83 (63.86%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFDEEFERELERSRREKEAAQ 345
MHPPLLRPHP C EE+K LM CHE+NPY KFFGACN+ K LD CF +EKE+ RR N KAR+FD F++ELE R+E E Q
Sbjct: 1 MHPPLLRPHPSCHEEVKMLMACHEENPYGKFFGACNDLKLALDSCFVLEKEEKRRKNLAKARRFDAGFQKELELRRKELEQEQ 83
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A484DYF6_BRELC (COX assembly mitochondrial protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DYF6_BRELC) HSP 1 Score: 90.5 bits (223), Expect = 1.000e-18 Identity = 40/65 (61.54%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 291
MH PL RPHP+CQ EIKAL+DCHE NPY KFFGAC++ KT LD CF EK + R N ++A+ D
Sbjct: 1 MHAPLDRPHPDCQAEIKALLDCHENNPYAKFFGACSDAKTALDKCFKAEKVRIRSENFKRAKASD 65
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A2P4XXV8_9STRA (COX assembly mitochondrial protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XXV8_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 1.460e-18 Identity = 45/95 (47.37%), Postives = 65/95 (68.42%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFDEEFERELERSRREKEAAQTR*RGVTQS*AN 381
MH PL RPHP+CQ EIKAL++CHE NPY KFFGAC + KT LD+CF EK + R N + A+ D +++++ RR++ AA+ + R ++ +N
Sbjct: 1 MHTPLDRPHPDCQTEIKALLECHESNPYAKFFGACGDVKTALDICFREEKNRIRSENFKHAKASDAYVKQKMQ-ERRDRVAAEEKARSEAKTTSN 94
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A225VCF9_9STRA (COX assembly mitochondrial protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VCF9_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 2.350e-18 Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 291
MH PL RPHP+CQ EIKAL++CH++NPY KFFGAC E KT LD+CF EK + R N + A+ D
Sbjct: 1 MHTPLDRPHPDCQTEIKALLECHDENPYAKFFGACGEIKTALDICFREEKNRIRSENFKHAKASD 65
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A3M6VJT8_9STRA (COX assembly mitochondrial protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VJT8_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 2.990e-18 Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 291
MH PL RPHP+CQ EIKAL+ CH+ NPY KFFGAC++ KT LD CF EKE+ R N ++A+ D
Sbjct: 1 MHTPLDRPHPDCQSEIKALLQCHDNNPYAKFFGACSDVKTALDWCFKHEKERIRAENLKRAKASD 65
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: G4ZUD5_PHYSP (COX assembly mitochondrial protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZUD5_PHYSP) HSP 1 Score: 88.2 bits (217), Expect = 8.150e-18 Identity = 39/65 (60.00%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 291
MH PL RPHP+CQ EIKAL++CHE+NPY KFFGAC + KT LD CF EK + R N ++A+ D
Sbjct: 1 MHTPLDRPHPDCQAEIKALLECHEENPYAKFFGACGDVKTALDWCFREEKVRIRSENFQRAKASD 65
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A6A3SY18_9STRA (COX assembly mitochondrial protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SY18_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.030e-17 Identity = 39/65 (60.00%), Postives = 47/65 (72.31%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 291
MH PL RPHP+CQ EIKAL++CH++NPY KFFGAC E KT LD CF EK + R N + A+ D
Sbjct: 1 MHTPLDRPHPDCQAEIKALLECHDENPYAKFFGACGEVKTALDWCFRQEKTRIRSENFKHAKASD 65
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: W2G7J4_PHYPR (COX assembly mitochondrial protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2G7J4_PHYPR) HSP 1 Score: 87.4 bits (215), Expect = 1.470e-17 Identity = 40/65 (61.54%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFD 291
MH PL RPHP+CQ EIKAL++CHE NPY KFFGAC E KT LD CF EK + R N + A+ D
Sbjct: 1 MHAPLDRPHPDCQAEIKALLECHENNPYAKFFGACGEVKTALDHCFKNEKIRMRSENFKHAKASD 65
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A0P1AB85_PLAHL (COX assembly mitochondrial protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AB85_PLAHL) HSP 1 Score: 85.9 bits (211), Expect = 4.010e-17 Identity = 44/83 (53.01%), Postives = 56/83 (67.47%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFDEEFERELERSRREKEAAQ 345
MH PL RPHP+CQ EIKAL+DCH NPY KFFGACN+ K+ LD CF EK + R N A+ D R+++ RR++ AA+
Sbjct: 1 MHAPLDRPHPDCQIEIKALLDCHNDNPYAKFFGACNDVKSALDQCFKKEKIRIRSENLRHAKASDAYVRRKMQ-ERRDRVAAE 82
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Match: A0A662Y911_9STRA (COX assembly mitochondrial protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y911_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 6.880e-17 Identity = 45/85 (52.94%), Postives = 56/85 (65.88%), Query Frame = 1
Query: 97 MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKEKSRRANSEKARKFDEEFERELERSRREKEAAQTR 351
MH L RPHP+CQ EIKAL++CH++NPY KFFG C E KT LD CF EK K R AN A+ D F R+ + RE+ AA+ +
Sbjct: 1 MHTSLDRPHPDCQAEIKALLECHDENPYAKFFGVCGEVKTALDWCFKKEKVKIRDANFRHAKASDA-FVRQKMQEHRERVAAEAK 84 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig2671.7305.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig2671.7305.1 >prot_H-paniculata_contig2671.7305.1 ID=prot_H-paniculata_contig2671.7305.1|Name=mRNA_H-paniculata_contig2671.7305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=86bp MHPPLLRPHPECQEEIKALMDCHEKNPYKKFFGACNEPKTTLDVCFAMEKback to top mRNA from alignment at H-paniculata_contig2671:8995..13973- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig2671.7305.1 ID=mRNA_H-paniculata_contig2671.7305.1|Name=mRNA_H-paniculata_contig2671.7305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4979bp|location=Sequence derived from alignment at H-paniculata_contig2671:8995..13973- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig2671:8995..13973- >mRNA_H-paniculata_contig2671.7305.1 ID=mRNA_H-paniculata_contig2671.7305.1|Name=mRNA_H-paniculata_contig2671.7305.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=516bp|location=Sequence derived from alignment at H-paniculata_contig2671:8995..13973- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |