prot_H-paniculata_contig267.7298.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig267.7298.1
Unique Nameprot_H-paniculata_contig267.7298.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length146
Homology
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BLAST of mRNA_H-paniculata_contig267.7298.1 vs. uniprot
Match: D8LS33_ECTSI (Conserved Cys-containing small protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS33_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 5.870e-25
Identity = 50/79 (63.29%), Postives = 61/79 (77.22%), Query Frame = 0 
Query:    7 KKTEEEATLAQELSTCMFQHYKFFAAGVLLGLPLSVKNKSYWPFTFAAVAGSAADMIEAQKTCKPQQDALNACIARQKA 85
            ++++EEA LA ELS+CM  HYK+ AAGVLLGLPLSV  KSYWP T AAVAG+AAD  E    C+PQ++AL A IAR+ A
Sbjct:    3 EQSKEEAELAAELSSCMLSHYKYCAAGVLLGLPLSVHKKSYWPVTLAAVAGTAADFKEGTADCRPQREALMAFIARKNA 81
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BLAST of mRNA_H-paniculata_contig267.7298.1 vs. uniprot
Match: A0A0P1APA3_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APA3_PLAHL)

HSP 1 Score: 50.4 bits (119), Expect = 2.460e-5
Identity = 29/80 (36.25%), Postives = 42/80 (52.50%), Query Frame = 0 
Query:    7 KKTEEEATLAQELSTCMFQHYKFFA-AGVLLGLPLSVKNKSYWPFTFAAVAGSAADM-IEAQKTCKPQQDALNACIARQK 84
            K  E+ A L Q L++CM         AGVL+G+P+S+K KSY PF    V GS  D  I     C+   +A+   + ++K
Sbjct:   13 KGNEDSAQLQQMLTSCMINRQILCCIAGVLIGIPISIKRKSYTPFAILGVLGSFVDYSIPYTTDCRMIHNAMQLALQQEK 92
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig267.7298.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LS33_ECTSI5.870e-2563.29Conserved Cys-containing small protein n=1 Tax=Ect... [more]
A0A0P1APA3_PLAHL2.460e-536.25Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig267contigH-paniculata_contig267:25170..27038 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig267.7298.1mRNA_H-paniculata_contig267.7298.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig267 25170..27038 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig267.7298.1 ID=prot_H-paniculata_contig267.7298.1|Name=mRNA_H-paniculata_contig267.7298.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp
MSSPFTKKTEEEATLAQELSTCMFQHYKFFAAGVLLGLPLSVKNKSYWPF
TFAAVAGSAADMIEAQKTCKPQQDALNACIARQKAFHQQEGGNQPVGADP
PELLPQQQDGEGDWPQHEWEGGFGKGEAAREEWVGGKEGRGRDKW*
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